RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 RSPH14Q9UHP6 348 aa16.4■□□□□ 0.22
CACNB1-206ENST00000539338 IQCA1LA6NCM1 817 aa16.4■□□□□ 0.22
CACNB1-206ENST00000539338 PHACTR2O75167 634 aa16.4■□□□□ 0.22
CACNB1-206ENST00000539338 SMARCC2Q8TAQ2 1214 aa16.4■□□□□ 0.22
CACNB1-206ENST00000539338 EDC3Q96F86 508 aaKnown RBP16.4■□□□□ 0.22
CACNB1-206ENST00000539338 LUC7L2Q9Y383 392 aaKnown RBP16.4■□□□□ 0.22
CACNB1-206ENST00000539338 CCDC172P0C7W6 258 aa16.4■□□□□ 0.22
CACNB1-206ENST00000539338 LLPHQ9BRT6 129 aaKnown RBP16.4■□□□□ 0.22
CACNB1-206ENST00000539338 MYL10Q9BUA6 226 aa16.4■□□□□ 0.22
CACNB1-206ENST00000539338 INCENPQ9NQS7 918 aa16.4■□□□□ 0.22
CACNB1-206ENST00000539338 KDM5DQ9BY66 1539 aa16.4■□□□□ 0.22
CACNB1-206ENST00000539338 KBTBD3Q8NAB2 608 aa16.39■□□□□ 0.21
CACNB1-206ENST00000539338 TIGD1Q96MW7 591 aa16.39■□□□□ 0.21
CACNB1-206ENST00000539338 KCNH3Q9ULD8 1083 aa16.39■□□□□ 0.21
CACNB1-206ENST00000539338 BICDL2A1A5D9 508 aa16.39■□□□□ 0.21
CACNB1-206ENST00000539338 GCKRQ14397 625 aa16.39■□□□□ 0.21
CACNB1-206ENST00000539338 APPBP2Q92624 585 aa16.39■□□□□ 0.21
CACNB1-206ENST00000539338 MLH3Q9UHC1 1453 aa16.39■□□□□ 0.21
CACNB1-206ENST00000539338 PIM2Q9P1W9 311 aa16.39■□□□□ 0.21
CACNB1-206ENST00000539338 ANGEL1Q9UNK9 670 aaKnown RBP16.39■□□□□ 0.21
CACNB1-206ENST00000539338 A2ML1A8K2U0 1454 aa16.39■□□□□ 0.21
CACNB1-206ENST00000539338 ARMC9Q7Z3E5 817 aa16.39■□□□□ 0.21
CACNB1-206ENST00000539338 GPHNQ9NQX3 736 aaPredicted RBP16.39■□□□□ 0.21
CACNB1-206ENST00000539338 CTNND2Q9UQB3 1225 aa16.39■□□□□ 0.21
CACNB1-206ENST00000539338 LDHBP07195 334 aaKnown RBP16.38■□□□□ 0.21
CACNB1-206ENST00000539338 ZNF75DP51815 510 aa16.38■□□□□ 0.21
CACNB1-206ENST00000539338 RILPL1Q5EBL4 403 aa16.38■□□□□ 0.21
CACNB1-206ENST00000539338 AKR1B15C9JRZ8 316 aaPredicted RBP16.38■□□□□ 0.21
CACNB1-206ENST00000539338 PRDM1O75626 825 aa16.38■□□□□ 0.21
CACNB1-206ENST00000539338 UFL1O94874 794 aa16.38■□□□□ 0.21
CACNB1-206ENST00000539338 KRT13P13646 458 aa16.38■□□□□ 0.21
CACNB1-206ENST00000539338 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.38■□□□□ 0.21
CACNB1-206ENST00000539338 RGS22Q8NE09 1264 aa16.38■□□□□ 0.21
CACNB1-206ENST00000539338 NEK11Q8NG66 645 aa16.38■□□□□ 0.21
CACNB1-206ENST00000539338 FERMT2Q96AC1 680 aa16.38■□□□□ 0.21
CACNB1-206ENST00000539338 SELENOOQ9BVL4 669 aa16.38■□□□□ 0.21
CACNB1-206ENST00000539338 KDM5CP41229 1560 aa16.38■□□□□ 0.21
CACNB1-206ENST00000539338 BRD1O95696 1058 aa16.38■□□□□ 0.21
CACNB1-206ENST00000539338 EIF4A1P60842 406 aaKnown RBP16.38■□□□□ 0.21
CACNB1-206ENST00000539338 TMEM87BQ96K49 555 aa16.38■□□□□ 0.21
CACNB1-206ENST00000539338 SLC52A2Q9HAB3 445 aa16.38■□□□□ 0.21
CACNB1-206ENST00000539338 RBM28Q9NW13 759 aaKnown RBP16.38■□□□□ 0.21
CACNB1-206ENST00000539338 PALD1Q9ULE6 856 aa16.38■□□□□ 0.21
CACNB1-206ENST00000539338 R3HDM1Q15032 1099 aaKnown RBP16.38■□□□□ 0.21
CACNB1-206ENST00000539338 SMCR8Q8TEV9 937 aaPredicted RBP16.38■□□□□ 0.21
CACNB1-206ENST00000539338 PHKBQ93100 1093 aa16.38■□□□□ 0.21
CACNB1-206ENST00000539338 CARD10Q9BWT7 1032 aa16.38■□□□□ 0.21
CACNB1-206ENST00000539338 MAPK8IP1Q9UQF2 711 aa16.38■□□□□ 0.21
CACNB1-206ENST00000539338 FSD2A1L4K1 749 aa16.37■□□□□ 0.21
CACNB1-206ENST00000539338 RIOK3O14730 519 aaKnown RBP16.37■□□□□ 0.21
CACNB1-206ENST00000539338 GNA11P29992 359 aa16.37■□□□□ 0.21
CACNB1-206ENST00000539338 LETM2Q2VYF4 491 aa16.37■□□□□ 0.21
CACNB1-206ENST00000539338 DCAF15Q66K64 600 aa16.37■□□□□ 0.21
CACNB1-206ENST00000539338 VPS18Q9P253 973 aa16.37■□□□□ 0.21
CACNB1-206ENST00000539338 CAPN2P17655 700 aa16.37■□□□□ 0.21
CACNB1-206ENST00000539338 PKP1Q13835 747 aa16.37■□□□□ 0.21
CACNB1-206ENST00000539338 ME3Q16798 604 aa16.37■□□□□ 0.21
CACNB1-206ENST00000539338 CNGA4Q8IV77 575 aa16.37■□□□□ 0.21
CACNB1-206ENST00000539338 VPS16Q9H269 839 aa16.37■□□□□ 0.21
CACNB1-206ENST00000539338 MRVI1Q9Y6F6 885 aa16.37■□□□□ 0.21
CACNB1-206ENST00000539338 POLR2DO15514 142 aaKnown RBP16.37■□□□□ 0.21
CACNB1-206ENST00000539338 DEXIO95424 95 aa16.37■□□□□ 0.21
CACNB1-206ENST00000539338 BRINP3Q76B58 766 aa16.37■□□□□ 0.21
CACNB1-206ENST00000539338 DIS3L2Q8IYB7 885 aaKnown RBP16.37■□□□□ 0.21
CACNB1-206ENST00000539338 V9GY48 417 aaPredicted RBP16.37■□□□□ 0.21
CACNB1-206ENST00000539338 U2AF2P26368 475 aaKnown RBP eCLIP16.37■□□□□ 0.21
CACNB1-206ENST00000539338 FANCCQ00597 558 aa16.37■□□□□ 0.21
CACNB1-206ENST00000539338 GTF3C6Q969F1 213 aa16.37■□□□□ 0.21
CACNB1-206ENST00000539338 USP44Q9H0E7 712 aa16.37■□□□□ 0.21
CACNB1-206ENST00000539338 SAP30BPQ9UHR5 308 aaKnown RBP16.37■□□□□ 0.21
CACNB1-206ENST00000539338 SPDYE3A6NKU9 549 aa16.36■□□□□ 0.21
CACNB1-206ENST00000539338 ERVV-2B6SEH9 535 aa16.36■□□□□ 0.21
CACNB1-206ENST00000539338 PUM3Q15397 648 aaKnown RBP16.36■□□□□ 0.21
CACNB1-206ENST00000539338 PIK3AP1Q6ZUJ8 805 aa16.36■□□□□ 0.21
CACNB1-206ENST00000539338 IGSF22Q8N9C0 903 aa16.36■□□□□ 0.21
CACNB1-206ENST00000539338 TAF5LO75529 589 aa16.36■□□□□ 0.21
CACNB1-206ENST00000539338 EVCP57679 992 aa16.36■□□□□ 0.21
CACNB1-206ENST00000539338 KCNQ3O43525 872 aa16.36■□□□□ 0.21
CACNB1-206ENST00000539338 DLGAP5Q15398 846 aa16.36■□□□□ 0.21
CACNB1-206ENST00000539338 C2orf69Q8N8R5 385 aa16.36■□□□□ 0.21
CACNB1-206ENST00000539338 ATRIPQ8WXE1 791 aa16.36■□□□□ 0.21
CACNB1-206ENST00000539338 ZNF496Q96IT1 587 aaPredicted RBP16.36■□□□□ 0.21
CACNB1-206ENST00000539338 KIAA0232Q92628 1395 aa16.36■□□□□ 0.21
CACNB1-206ENST00000539338 TMEM110-MUSTN1A8MSY1 372 aa16.36■□□□□ 0.21
CACNB1-206ENST00000539338 ZNF202O95125 648 aa16.36■□□□□ 0.21
CACNB1-206ENST00000539338 CTDSPL2Q05D32 466 aa16.36■□□□□ 0.21
CACNB1-206ENST00000539338 PLS1Q14651 629 aa16.36■□□□□ 0.21
CACNB1-206ENST00000539338 CCDC122Q5T0U0 273 aa16.36■□□□□ 0.21
CACNB1-206ENST00000539338 SPECC1LQ69YQ0 1117 aa16.35■□□□□ 0.21
CACNB1-206ENST00000539338 ZBTB7AO95365 584 aa16.35■□□□□ 0.21
CACNB1-206ENST00000539338 PTH1RQ03431 593 aa16.35■□□□□ 0.21
CACNB1-206ENST00000539338 CCDC155Q8N6L0 562 aa16.35■□□□□ 0.21
CACNB1-206ENST00000539338 CHAMP1Q96JM3 812 aa16.35■□□□□ 0.21
CACNB1-206ENST00000539338 CCDC93Q567U6 631 aa16.35■□□□□ 0.21
CACNB1-206ENST00000539338 TICAM2Q86XR7 235 aa16.35■□□□□ 0.21
CACNB1-206ENST00000539338 PPP1R9BQ96SB3 815 aa16.35■□□□□ 0.21
CACNB1-206ENST00000539338 ZAP70P43403 619 aa16.35■□□□□ 0.21
CACNB1-206ENST00000539338 DNAJC21Q5F1R6 531 aaKnown RBP16.35■□□□□ 0.21
CACNB1-206ENST00000539338 SLC27A3Q5K4L6 730 aa16.35■□□□□ 0.21
CACNB1-206ENST00000539338 TMC4Q7Z404 712 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms