RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 DBNDD2Q9BQY9 259 aa27.3■■□□□ 1.96
SCARB1-206ENST00000539320 ZFYVE28Q9HCC9 887 aa27.3■■□□□ 1.96
SCARB1-206ENST00000539320 RAI14Q9P0K7 980 aa27.3■■□□□ 1.96
SCARB1-206ENST00000539320 NOP58Q9Y2X3 529 aaKnown RBP27.3■■□□□ 1.96
SCARB1-206ENST00000539320 ZSCAN29Q8IWY8 852 aaPredicted RBP27.29■■□□□ 1.96
SCARB1-206ENST00000539320 ZCCHC17Q9NP64 241 aaKnown RBP27.29■■□□□ 1.96
SCARB1-206ENST00000539320 DDX4Q9NQI0 724 aaKnown RBP27.29■■□□□ 1.96
SCARB1-206ENST00000539320 MAST2Q6P0Q8 1798 aa27.29■■□□□ 1.96
SCARB1-206ENST00000539320 LDHCP07864 332 aa27.28■■□□□ 1.96
SCARB1-206ENST00000539320 RHBDL3P58872 404 aa27.28■■□□□ 1.96
SCARB1-206ENST00000539320 SP3Q02447 781 aa27.28■■□□□ 1.96
SCARB1-206ENST00000539320 PICALMQ13492 652 aa27.28■■□□□ 1.96
SCARB1-206ENST00000539320 CCDC158Q5M9N0 1113 aa27.28■■□□□ 1.96
SCARB1-206ENST00000539320 CEP85Q6P2H3 762 aa27.28■■□□□ 1.96
SCARB1-206ENST00000539320 BTBD19C9JJ37 291 aa27.27■■□□□ 1.96
SCARB1-206ENST00000539320 SH3BP5LQ7L8J4 393 aa27.27■■□□□ 1.96
SCARB1-206ENST00000539320 MS4A1P11836 297 aa27.26■■□□□ 1.95
SCARB1-206ENST00000539320 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.26■■□□□ 1.95
SCARB1-206ENST00000539320 LRP2BPQ9P2M1 347 aa27.26■■□□□ 1.95
SCARB1-206ENST00000539320 KCNH4Q9UQ05 1017 aa27.26■■□□□ 1.95
SCARB1-206ENST00000539320 DDTLA6NHG4 134 aaPredicted RBP27.25■■□□□ 1.95
SCARB1-206ENST00000539320 MAP4K4O95819 1239 aaPredicted RBP27.25■■□□□ 1.95
SCARB1-206ENST00000539320 EFCC1Q9HA90 598 aa27.25■■□□□ 1.95
SCARB1-206ENST00000539320 SNRKQ9NRH2 765 aa27.25■■□□□ 1.95
SCARB1-206ENST00000539320 NPM3O75607 178 aaKnown RBP27.24■■□□□ 1.95
SCARB1-206ENST00000539320 DBNLQ9UJU6 430 aaKnown RBP27.24■■□□□ 1.95
SCARB1-206ENST00000539320 PHF20L1A8MW92 1017 aa27.23■■□□□ 1.95
SCARB1-206ENST00000539320 SCYL3Q8IZE3 742 aa27.23■■□□□ 1.95
SCARB1-206ENST00000539320 ZNF512BQ96KM6 892 aaPredicted RBP27.23■■□□□ 1.95
SCARB1-206ENST00000539320 COL2A1P02458 1487 aaPredicted RBP27.23■■□□□ 1.95
SCARB1-206ENST00000539320 PDE4DIPQ5VU43 2346 aa27.23■■□□□ 1.95
SCARB1-206ENST00000539320 MAP3K10Q02779 954 aa27.22■■□□□ 1.95
SCARB1-206ENST00000539320 PICK1Q9NRD5 415 aa27.22■■□□□ 1.95
SCARB1-206ENST00000539320 TLR7Q9NYK1 1049 aaKnown RBP27.22■■□□□ 1.95
SCARB1-206ENST00000539320 DOCK1Q14185 1865 aa27.21■■□□□ 1.95
SCARB1-206ENST00000539320 TLR2O60603 784 aa27.21■■□□□ 1.95
SCARB1-206ENST00000539320 CAP1Q01518 475 aa27.21■■□□□ 1.95
SCARB1-206ENST00000539320 ANKRD23Q86SG2 305 aa27.21■■□□□ 1.95
SCARB1-206ENST00000539320 NOL10Q9BSC4 688 aaKnown RBP27.21■■□□□ 1.95
SCARB1-206ENST00000539320 PTPN22Q9Y2R2 807 aa27.21■■□□□ 1.95
SCARB1-206ENST00000539320 HTTP42858 3142 aa27.2■■□□□ 1.95
SCARB1-206ENST00000539320 NAA16Q6N069 864 aaPredicted RBP27.2■■□□□ 1.94
SCARB1-206ENST00000539320 ERC1Q8IUD2 1116 aa27.2■■□□□ 1.94
SCARB1-206ENST00000539320 TEX11Q8IYF3 940 aa27.2■■□□□ 1.94
SCARB1-206ENST00000539320 EAF2Q96CJ1 260 aaPredicted RBP27.2■■□□□ 1.94
SCARB1-206ENST00000539320 CCDC8Q9H0W5 538 aaPredicted RBP27.2■■□□□ 1.94
SCARB1-206ENST00000539320 EXOC6BQ9Y2D4 811 aa27.2■■□□□ 1.94
SCARB1-206ENST00000539320 CYP2E1P05181 493 aaPredicted RBP27.19■■□□□ 1.94
SCARB1-206ENST00000539320 SLURP2P0DP57 97 aa27.19■■□□□ 1.94
SCARB1-206ENST00000539320 ARHGEF6Q15052 776 aa27.19■■□□□ 1.94
SCARB1-206ENST00000539320 OSBPL5Q9H0X9 879 aaPredicted RBP27.19■■□□□ 1.94
SCARB1-206ENST00000539320 CXCL11O14625 94 aa27.18■■□□□ 1.94
SCARB1-206ENST00000539320 ZAP70P43403 619 aa27.18■■□□□ 1.94
SCARB1-206ENST00000539320 MOGSQ13724 837 aa27.18■■□□□ 1.94
SCARB1-206ENST00000539320 DDX19BQ9UMR2 479 aa27.18■■□□□ 1.94
SCARB1-206ENST00000539320 TBC1D12O60347 775 aa27.17■■□□□ 1.94
SCARB1-206ENST00000539320 CTNND1O60716 968 aaKnown RBP27.17■■□□□ 1.94
SCARB1-206ENST00000539320 IGSF3O75054 1194 aa27.17■■□□□ 1.94
SCARB1-206ENST00000539320 PTPRAP18433 802 aa27.17■■□□□ 1.94
SCARB1-206ENST00000539320 SH3RF3Q8TEJ3 882 aaPredicted RBP27.17■■□□□ 1.94
SCARB1-206ENST00000539320 PDHXO00330 501 aa27.16■■□□□ 1.94
SCARB1-206ENST00000539320 BAG3O95817 575 aa27.16■■□□□ 1.94
SCARB1-206ENST00000539320 PLCG2P16885 1265 aa27.16■■□□□ 1.94
SCARB1-206ENST00000539320 HSP90AB4PQ58FF6 505 aa27.16■■□□□ 1.94
SCARB1-206ENST00000539320 PIH1D3Q9NQM4 214 aaKnown RBP27.16■■□□□ 1.94
SCARB1-206ENST00000539320 AATFQ9NY61 560 aaKnown RBP eCLIP27.16■■□□□ 1.94
SCARB1-206ENST00000539320 RCAN3Q9UKA8 241 aa27.16■■□□□ 1.94
SCARB1-206ENST00000539320 COG6Q9Y2V7 657 aa27.16■■□□□ 1.94
SCARB1-206ENST00000539320 ZHX2Q9Y6X8 837 aa27.16■■□□□ 1.94
SCARB1-206ENST00000539320 MYO5AQ9Y4I1 1855 aaKnown RBP27.15■■□□□ 1.94
SCARB1-206ENST00000539320 KIAA0100Q14667 2235 aaKnown RBP27.15■■□□□ 1.94
SCARB1-206ENST00000539320 AACSQ86V21 672 aa27.15■■□□□ 1.94
SCARB1-206ENST00000539320 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.15■■□□□ 1.944e-7■■□□□ 12
SCARB1-206ENST00000539320 ADGRA2Q96PE1 1338 aa27.15■■□□□ 1.94
SCARB1-206ENST00000539320 A0A0G2JLL6 359 aaPredicted RBP27.14■■□□□ 1.94
SCARB1-206ENST00000539320 FAM196BA6NMK8 535 aa27.14■■□□□ 1.94
SCARB1-206ENST00000539320 LACTBP83111 547 aaPredicted RBP27.14■■□□□ 1.94
SCARB1-206ENST00000539320 KIF22Q14807 665 aa27.14■■□□□ 1.94
SCARB1-206ENST00000539320 PRRT2Q7Z6L0 340 aaPredicted RBP27.14■■□□□ 1.94
SCARB1-206ENST00000539320 ADGRA1Q86SQ6 560 aa27.14■■□□□ 1.94
SCARB1-206ENST00000539320 PARK7Q99497 189 aaKnown RBP27.14■■□□□ 1.94
SCARB1-206ENST00000539320 PTPRFP10586 1907 aa27.14■■□□□ 1.93
SCARB1-206ENST00000539320 ZSWIM8A7E2V4 1837 aa27.13■■□□□ 1.93
SCARB1-206ENST00000539320 PPP4CP60510 307 aa27.13■■□□□ 1.93
SCARB1-206ENST00000539320 C17orf99Q6UX52 265 aa27.13■■□□□ 1.93
SCARB1-206ENST00000539320 ARMC5Q96C12 935 aa27.13■■□□□ 1.93
SCARB1-206ENST00000539320 CPA4Q9UI42 421 aa27.13■■□□□ 1.93
SCARB1-206ENST00000539320 AFG3L2Q9Y4W6 797 aa27.13■■□□□ 1.93
SCARB1-206ENST00000539320 PHIPQ8WWQ0 1821 aa27.13■■□□□ 1.93
SCARB1-206ENST00000539320 HMMRO75330 724 aa27.12■■□□□ 1.93
SCARB1-206ENST00000539320 GPAT2Q6NUI2 795 aa27.12■■□□□ 1.93
SCARB1-206ENST00000539320 FASTKD5Q7L8L6 764 aaKnown RBP27.12■■□□□ 1.93
SCARB1-206ENST00000539320 RPAP2Q8IXW5 612 aaPredicted RBP27.12■■□□□ 1.93
SCARB1-206ENST00000539320 ARHGAP39Q9C0H5 1083 aa27.12■■□□□ 1.93
SCARB1-206ENST00000539320 ZBTB40Q9NUA8 1239 aa27.12■■□□□ 1.93
SCARB1-206ENST00000539320 PTCH2Q9Y6C5 1203 aa27.12■■□□□ 1.93
SCARB1-206ENST00000539320 CDK5RAP2Q96SN8 1893 aa27.11■■□□□ 1.93
SCARB1-206ENST00000539320 IDH1O75874 414 aaKnown RBP27.11■■□□□ 1.93
SCARB1-206ENST00000539320 RHPN1Q8TCX5 695 aa27.11■■□□□ 1.93
SCARB1-206ENST00000539320 IL1RAPL2Q9NP60 686 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms