RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 SCNN1DP51172 638 aa29.93■■■□□ 2.38
KLHL42-202ENST00000539176 DACT2Q5SW24 774 aa29.93■■■□□ 2.38
KLHL42-202ENST00000539176 CHST3Q7LGC8 479 aa29.93■■■□□ 2.38
KLHL42-202ENST00000539176 GTF3C6Q969F1 213 aa29.93■■■□□ 2.38
KLHL42-202ENST00000539176 CYP2D7A0A087X1C5 515 aa29.93■■■□□ 2.38
KLHL42-202ENST00000539176 IGSF3O75054 1194 aa29.93■■■□□ 2.38
KLHL42-202ENST00000539176 STRIP1Q5VSL9 837 aa29.93■■■□□ 2.38
KLHL42-202ENST00000539176 FBXL16Q8N461 479 aa29.93■■■□□ 2.38
KLHL42-202ENST00000539176 CHMP4CQ96CF2 233 aa29.93■■■□□ 2.38
KLHL42-202ENST00000539176 USP17L3A6NCW0 530 aa29.92■■■□□ 2.38
KLHL42-202ENST00000539176 USP17L4A6NCW7 530 aa29.92■■■□□ 2.38
KLHL42-202ENST00000539176 ZNF445P59923 1031 aa29.92■■■□□ 2.38
KLHL42-202ENST00000539176 USP17L1Q7RTZ2 530 aa29.92■■■□□ 2.38
KLHL42-202ENST00000539176 NOL10Q9BSC4 688 aaKnown RBP29.92■■■□□ 2.38
KLHL42-202ENST00000539176 MTMR6Q9Y217 621 aa29.92■■■□□ 2.38
KLHL42-202ENST00000539176 FGD1P98174 961 aa29.91■■■□□ 2.38
KLHL42-202ENST00000539176 EXOSC10Q01780 885 aaKnown RBP29.91■■■□□ 2.38
KLHL42-202ENST00000539176 GPT2Q8TD30 523 aa29.91■■■□□ 2.38
KLHL42-202ENST00000539176 DAGLAQ9Y4D2 1042 aa29.91■■■□□ 2.38
KLHL42-202ENST00000539176 MINDY4BA8MYZ0 360 aa29.91■■■□□ 2.38
KLHL42-202ENST00000539176 EVX2Q03828 476 aa29.91■■■□□ 2.38
KLHL42-202ENST00000539176 SUGT1Q9Y2Z0 365 aa29.91■■■□□ 2.38
KLHL42-202ENST00000539176 CDK5RAP2Q96SN8 1893 aa29.9■■■□□ 2.38
KLHL42-202ENST00000539176 GAKO14976 1311 aa29.9■■■□□ 2.38
KLHL42-202ENST00000539176 GPR75-ASB3A0A0A6YYF3 556 aa29.9■■■□□ 2.38
KLHL42-202ENST00000539176 BAG3O95817 575 aa29.9■■■□□ 2.38
KLHL42-202ENST00000539176 PPP4CP60510 307 aa29.9■■■□□ 2.38
KLHL42-202ENST00000539176 CSPP1Q1MSJ5 1256 aa29.9■■■□□ 2.38
KLHL42-202ENST00000539176 CAVIN1Q6NZI2 390 aaKnown RBP29.9■■■□□ 2.38
KLHL42-202ENST00000539176 KIAA0825Q8IV33 1275 aa29.9■■■□□ 2.38
KLHL42-202ENST00000539176 GRPEL1Q9HAV7 217 aa29.9■■■□□ 2.38
KLHL42-202ENST00000539176 DCP1AQ9NPI6 582 aaPredicted RBP29.9■■■□□ 2.38
KLHL42-202ENST00000539176 NEDD4P46934 1319 aa29.9■■■□□ 2.38
KLHL42-202ENST00000539176 TIAM2Q8IVF5 1701 aa29.9■■■□□ 2.38
KLHL42-202ENST00000539176 NCLP19338 710 aaKnown RBP29.89■■■□□ 2.38
KLHL42-202ENST00000539176 FAM163AQ96GL9 167 aaPredicted RBP29.89■■■□□ 2.38
KLHL42-202ENST00000539176 NFKBIEO00221 500 aa29.89■■■□□ 2.37
KLHL42-202ENST00000539176 PPARAQ07869 468 aa29.89■■■□□ 2.37
KLHL42-202ENST00000539176 SLF2Q8IX21 1173 aa29.89■■■□□ 2.37
KLHL42-202ENST00000539176 LLPHQ9BRT6 129 aaKnown RBP29.89■■■□□ 2.37
KLHL42-202ENST00000539176 XRCC6P12956 609 aaKnown RBP eCLIP29.88■■■□□ 2.37
KLHL42-202ENST00000539176 IARSP41252 1262 aaKnown RBP29.88■■■□□ 2.37
KLHL42-202ENST00000539176 SLC4A8Q2Y0W8 1093 aa29.88■■■□□ 2.37
KLHL42-202ENST00000539176 LARP1BQ659C4 914 aaKnown RBP29.88■■■□□ 2.37
KLHL42-202ENST00000539176 CTR9Q6PD62 1173 aa29.88■■■□□ 2.37
KLHL42-202ENST00000539176 MB21D2Q8IYB1 491 aaPredicted RBP29.88■■■□□ 2.37
KLHL42-202ENST00000539176 NCOA7Q8NI08 942 aa29.88■■■□□ 2.37
KLHL42-202ENST00000539176 BRF1Q92994 677 aa29.88■■■□□ 2.37
KLHL42-202ENST00000539176 TAOK3Q9H2K8 898 aa29.88■■■□□ 2.37
KLHL42-202ENST00000539176 PSME4Q14997 1843 aa29.88■■■□□ 2.37
KLHL42-202ENST00000539176 USP17L12C9JPN9 530 aa29.87■■■□□ 2.37
KLHL42-202ENST00000539176 USP17L21D6R901 530 aa29.87■■■□□ 2.37
KLHL42-202ENST00000539176 RAD17O75943 681 aa29.87■■■□□ 2.37
KLHL42-202ENST00000539176 CYP2D6P10635 497 aa29.87■■■□□ 2.37
KLHL42-202ENST00000539176 USP5P45974 858 aa29.87■■■□□ 2.37
KLHL42-202ENST00000539176 RALYLQ86SE5 291 aaKnown RBP29.87■■■□□ 2.37
KLHL42-202ENST00000539176 PFKFB2O60825 505 aa29.87■■■□□ 2.37
KLHL42-202ENST00000539176 ZSCAN23Q3MJ62 389 aa29.87■■■□□ 2.37
KLHL42-202ENST00000539176 TGFBRAP1Q8WUH2 860 aa29.87■■■□□ 2.37
KLHL42-202ENST00000539176 ATP8A2Q9NTI2 1148 aa29.87■■■□□ 2.37
KLHL42-202ENST00000539176 B4E1Z4 1266 aa29.86■■■□□ 2.37
KLHL42-202ENST00000539176 ANTXR2P58335 489 aa29.86■■■□□ 2.37
KLHL42-202ENST00000539176 RHBDL3P58872 404 aa29.86■■■□□ 2.37
KLHL42-202ENST00000539176 GIMAP6Q6P9H5 292 aa29.86■■■□□ 2.37
KLHL42-202ENST00000539176 SYAP1Q96A49 352 aaPredicted RBP29.86■■■□□ 2.37
KLHL42-202ENST00000539176 CHAMP1Q96JM3 812 aa29.86■■■□□ 2.37
KLHL42-202ENST00000539176 FHDC1Q9C0D6 1143 aaPredicted RBP29.86■■■□□ 2.37
KLHL42-202ENST00000539176 GPHNQ9NQX3 736 aaPredicted RBP29.86■■■□□ 2.37
KLHL42-202ENST00000539176 PCDHAC2Q9Y5I4 1007 aa29.86■■■□□ 2.37
KLHL42-202ENST00000539176 WDR19Q8NEZ3 1342 aa29.86■■■□□ 2.37
KLHL42-202ENST00000539176 LAMB1P07942 1786 aa29.85■■■□□ 2.37
KLHL42-202ENST00000539176 NAV1Q8NEY1 1877 aa29.85■■■□□ 2.37
KLHL42-202ENST00000539176 RASSF7Q02833 373 aa29.85■■■□□ 2.37
KLHL42-202ENST00000539176 AKNAD1Q5T1N1 836 aa29.85■■■□□ 2.37
KLHL42-202ENST00000539176 TEX11Q8IYF3 940 aa29.85■■■□□ 2.37
KLHL42-202ENST00000539176 USP17L8P0C7I0 530 aa29.85■■■□□ 2.37
KLHL42-202ENST00000539176 FKBP1AP62942 108 aaKnown RBP29.85■■■□□ 2.37
KLHL42-202ENST00000539176 CYB5R4Q7L1T6 521 aa29.85■■■□□ 2.37
KLHL42-202ENST00000539176 MAPKAPK5Q8IW41 473 aa29.85■■■□□ 2.37
KLHL42-202ENST00000539176 NIM1KQ8IY84 436 aa29.85■■■□□ 2.37
KLHL42-202ENST00000539176 ARFGEF1Q9Y6D6 1849 aa29.84■■■□□ 2.37
KLHL42-202ENST00000539176 VPS37CA5D8V6 355 aaPredicted RBP29.84■■■□□ 2.37
KLHL42-202ENST00000539176 PRC1O43663 620 aa29.84■■■□□ 2.37
KLHL42-202ENST00000539176 TRDNQ13061 729 aa29.84■■■□□ 2.37
KLHL42-202ENST00000539176 MCM9Q9NXL9 1143 aa29.84■■■□□ 2.37
KLHL42-202ENST00000539176 MKRN1Q9UHC7 482 aaKnown RBP29.84■■■□□ 2.37
KLHL42-202ENST00000539176 DTNBO60941 627 aa29.83■■■□□ 2.37
KLHL42-202ENST00000539176 STK3Q13188 491 aa29.83■■■□□ 2.37
KLHL42-202ENST00000539176 RRP12Q5JTH9 1297 aaKnown RBP29.83■■■□□ 2.37
KLHL42-202ENST00000539176 STAG1Q8WVM7 1258 aa29.83■■■□□ 2.37
KLHL42-202ENST00000539176 ZNF274Q96GC6 653 aaPredicted RBP29.83■■■□□ 2.37
KLHL42-202ENST00000539176 KIF3AQ9Y496 699 aa29.83■■■□□ 2.37
KLHL42-202ENST00000539176 PSMD14O00487 310 aa29.82■■■□□ 2.37
KLHL42-202ENST00000539176 CRKP46108 304 aa29.82■■■□□ 2.37
KLHL42-202ENST00000539176 MFSD6Q6ZSS7 791 aa29.82■■■□□ 2.37
KLHL42-202ENST00000539176 USP48Q86UV5 1035 aa29.82■■■□□ 2.37
KLHL42-202ENST00000539176 TEKT1Q969V4 418 aa29.82■■■□□ 2.37
KLHL42-202ENST00000539176 TOMM22Q9NS69 142 aa29.82■■■□□ 2.37
KLHL42-202ENST00000539176 SAP30BPQ9UHR5 308 aaKnown RBP29.82■■■□□ 2.37
KLHL42-202ENST00000539176 ANAPC4Q9UJX5 808 aa29.82■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms