RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 MAST2Q6P0Q8 1798 aa14.14□□□□□ -0.15
RTN3-209ENST00000538995 RAB11FIP3O75154 756 aa14.14□□□□□ -0.15
RTN3-209ENST00000538995 CYP2E1P05181 493 aaPredicted RBP14.14□□□□□ -0.15
RTN3-209ENST00000538995 PPIL2Q13356 520 aa14.14□□□□□ -0.15
RTN3-209ENST00000538995 MIGA2Q7L4E1 593 aa14.14□□□□□ -0.15
RTN3-209ENST00000538995 AACSQ86V21 672 aa14.14□□□□□ -0.15
RTN3-209ENST00000538995 SIRT2Q8IXJ6 389 aa14.14□□□□□ -0.15
RTN3-209ENST00000538995 ZNF296Q8WUU4 475 aaPredicted RBP14.14□□□□□ -0.15
RTN3-209ENST00000538995 ZKSCAN4Q969J2 545 aaPredicted RBP14.14□□□□□ -0.15
RTN3-209ENST00000538995 OTUD5Q96G74 571 aa14.14□□□□□ -0.15
RTN3-209ENST00000538995 NOL10Q9BSC4 688 aaKnown RBP14.14□□□□□ -0.15
RTN3-209ENST00000538995 CCDC8Q9H0W5 538 aaPredicted RBP14.14□□□□□ -0.15
RTN3-209ENST00000538995 SNRKQ9NRH2 765 aa14.14□□□□□ -0.15
RTN3-209ENST00000538995 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.14□□□□□ -0.15
RTN3-209ENST00000538995 CASP8AP2Q9UKL3 1982 aa14.14□□□□□ -0.15
RTN3-209ENST00000538995 BAG3O95817 575 aa14.13□□□□□ -0.15
RTN3-209ENST00000538995 PLCG2P16885 1265 aa14.13□□□□□ -0.15
RTN3-209ENST00000538995 ZAP70P43403 619 aa14.13□□□□□ -0.15
RTN3-209ENST00000538995 MAP3K10Q02779 954 aa14.13□□□□□ -0.15
RTN3-209ENST00000538995 PPATQ06203 517 aa14.13□□□□□ -0.15
RTN3-209ENST00000538995 C20orf194Q5TEA3 1177 aa14.13□□□□□ -0.15
RTN3-209ENST00000538995 NAA16Q6N069 864 aaPredicted RBP14.13□□□□□ -0.15
RTN3-209ENST00000538995 ZFPM1Q8IX07 1006 aa14.13□□□□□ -0.15
RTN3-209ENST00000538995 CLASRPQ8N2M8 674 aaKnown RBP14.13□□□□□ -0.15
RTN3-209ENST00000538995 CNKSR2Q8WXI2 1034 aa14.13□□□□□ -0.15
RTN3-209ENST00000538995 ZCCHC17Q9NP64 241 aaKnown RBP14.13□□□□□ -0.15
RTN3-209ENST00000538995 DDX4Q9NQI0 724 aaKnown RBP14.13□□□□□ -0.15
RTN3-209ENST00000538995 CCL15-CCL14A0A0B4J2E2 113 aa14.12□□□□□ -0.15
RTN3-209ENST00000538995 FKTNO75072 461 aa14.12□□□□□ -0.15
RTN3-209ENST00000538995 CETPP11597 493 aa14.12□□□□□ -0.15
RTN3-209ENST00000538995 INPP5BP32019 993 aa14.12□□□□□ -0.15
RTN3-209ENST00000538995 SNAPC2Q13487 334 aa14.12□□□□□ -0.15
RTN3-209ENST00000538995 PICALMQ13492 652 aa14.12□□□□□ -0.15
RTN3-209ENST00000538995 PKN2Q16513 984 aaKnown RBP14.12□□□□□ -0.15
RTN3-209ENST00000538995 CCL15Q16663 113 aa14.12□□□□□ -0.15
RTN3-209ENST00000538995 SH3BP5LQ7L8J4 393 aa14.12□□□□□ -0.15
RTN3-209ENST00000538995 CERS3Q8IU89 383 aa14.12□□□□□ -0.15
RTN3-209ENST00000538995 ZSCAN29Q8IWY8 852 aaPredicted RBP14.12□□□□□ -0.15
RTN3-209ENST00000538995 BRI3BPQ8WY22 251 aa14.12□□□□□ -0.15
RTN3-209ENST00000538995 PTPN18Q99952 460 aa14.12□□□□□ -0.15
RTN3-209ENST00000538995 DDTLA6NHG4 134 aaPredicted RBP14.11□□□□□ -0.15
RTN3-209ENST00000538995 IRF6O14896 467 aa14.11□□□□□ -0.15
RTN3-209ENST00000538995 TBC1D12O60347 775 aa14.11□□□□□ -0.15
RTN3-209ENST00000538995 PPP4CP60510 307 aa14.11□□□□□ -0.15
RTN3-209ENST00000538995 TEX11Q8IYF3 940 aa14.11□□□□□ -0.15
RTN3-209ENST00000538995 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.11□□□□□ -0.15
RTN3-209ENST00000538995 OSBPL5Q9H0X9 879 aaPredicted RBP14.11□□□□□ -0.15
RTN3-209ENST00000538995 IL1RAPL2Q9NP60 686 aa14.11□□□□□ -0.15
RTN3-209ENST00000538995 PIH1D3Q9NQM4 214 aaKnown RBP14.11□□□□□ -0.15
RTN3-209ENST00000538995 DOCK2Q92608 1830 aa14.11□□□□□ -0.15
RTN3-209ENST00000538995 PHF20L1A8MW92 1017 aa14.1□□□□□ -0.15
RTN3-209ENST00000538995 IFIT2P09913 472 aaKnown RBP14.1□□□□□ -0.15
RTN3-209ENST00000538995 CRHR2Q13324 411 aa14.1□□□□□ -0.15
RTN3-209ENST00000538995 SCYL3Q8IZE3 742 aa14.1□□□□□ -0.15
RTN3-209ENST00000538995 R3HDMLQ9H3Y0 253 aa14.1□□□□□ -0.15
RTN3-209ENST00000538995 KCNH4Q9UQ05 1017 aa14.1□□□□□ -0.15
RTN3-209ENST00000538995 CTNND1O60716 968 aaKnown RBP14.09□□□□□ -0.15
RTN3-209ENST00000538995 IDH1O75874 414 aaKnown RBP14.09□□□□□ -0.15
RTN3-209ENST00000538995 MAP3K12Q12852 859 aa14.09□□□□□ -0.15
RTN3-209ENST00000538995 TTF1Q15361 905 aaPredicted RBP14.09□□□□□ -0.15
RTN3-209ENST00000538995 SH3RF3Q8TEJ3 882 aaPredicted RBP14.09□□□□□ -0.15
RTN3-209ENST00000538995 DHX36Q9H2U1 1008 aaKnown RBP14.09□□□□□ -0.15
RTN3-209ENST00000538995 PICK1Q9NRD5 415 aa14.09□□□□□ -0.15
RTN3-209ENST00000538995 AATFQ9NY61 560 aaKnown RBP eCLIP14.09□□□□□ -0.15
RTN3-209ENST00000538995 CXCL11O14625 94 aa14.08□□□□□ -0.16
RTN3-209ENST00000538995 TAF1CQ15572 869 aaPredicted RBP14.08□□□□□ -0.16
RTN3-209ENST00000538995 ADGRA1Q86SQ6 560 aa14.08□□□□□ -0.16
RTN3-209ENST00000538995 FAM43AQ8N2R8 423 aa14.08□□□□□ -0.16
RTN3-209ENST00000538995 ERO1AQ96HE7 468 aa14.08□□□□□ -0.16
RTN3-209ENST00000538995 ZFYVE28Q9HCC9 887 aa14.08□□□□□ -0.16
RTN3-209ENST00000538995 HERC5Q9UII4 1024 aaKnown RBP14.08□□□□□ -0.16
RTN3-209ENST00000538995 CCDC85CA6NKD9 419 aa14.07□□□□□ -0.16
RTN3-209ENST00000538995 BTBD19C9JJ37 291 aa14.07□□□□□ -0.16
RTN3-209ENST00000538995 APBB1O00213 710 aa14.07□□□□□ -0.16
RTN3-209ENST00000538995 CYP7A1P22680 504 aa14.07□□□□□ -0.16
RTN3-209ENST00000538995 ANKRD23Q86SG2 305 aa14.07□□□□□ -0.16
RTN3-209ENST00000538995 LRRCC1Q9C099 1032 aa14.07□□□□□ -0.16
RTN3-209ENST00000538995 FLT1P17948 1338 aa14.07□□□□□ -0.16
RTN3-209ENST00000538995 PTPRAP18433 802 aa14.06□□□□□ -0.16
RTN3-209ENST00000538995 RRP1P56182 461 aaKnown RBP14.06□□□□□ -0.16
RTN3-209ENST00000538995 SP3Q02447 781 aa14.06□□□□□ -0.16
RTN3-209ENST00000538995 FBXO46Q6PJ61 603 aaPredicted RBP14.06□□□□□ -0.16
RTN3-209ENST00000538995 MAGEB6Q8N7X4 407 aa14.06□□□□□ -0.16
RTN3-209ENST00000538995 TBC1D2Q9BYX2 928 aa14.06□□□□□ -0.16
RTN3-209ENST00000538995 ANTXR1Q9H6X2 564 aa14.06□□□□□ -0.16
RTN3-209ENST00000538995 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.06□□□□□ -0.16
RTN3-209ENST00000538995 PI4KBQ9UBF8 816 aa14.06□□□□□ -0.16
RTN3-209ENST00000538995 AK9Q5TCS8 1911 aa14.05□□□□□ -0.16
RTN3-209ENST00000538995 TLR2O60603 784 aa14.05□□□□□ -0.16
RTN3-209ENST00000538995 METTL16Q86W50 562 aaKnown RBP14.05□□□□□ -0.16
RTN3-209ENST00000538995 TGFBRAP1Q8WUH2 860 aa14.05□□□□□ -0.16
RTN3-209ENST00000538995 NDUFB9Q9Y6M9 179 aa14.05□□□□□ -0.16
RTN3-209ENST00000538995 ZHX2Q9Y6X8 837 aa14.05□□□□□ -0.16
RTN3-209ENST00000538995 A0A0G2JLL6 359 aaPredicted RBP14.04□□□□□ -0.16
RTN3-209ENST00000538995 ATP5JP18859 108 aa14.04□□□□□ -0.16
RTN3-209ENST00000538995 MOGSQ13724 837 aa14.04□□□□□ -0.16
RTN3-209ENST00000538995 ARHGEF6Q15052 776 aa14.04□□□□□ -0.16
RTN3-209ENST00000538995 FASTKD5Q7L8L6 764 aaKnown RBP14.04□□□□□ -0.16
RTN3-209ENST00000538995 OTOP1Q7RTM1 612 aa14.04□□□□□ -0.16
RTN3-209ENST00000538995 PRRT2Q7Z6L0 340 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms