RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 TTF1Q15361 905 aaPredicted RBP16.9■□□□□ 0.3
CDCA3-207ENST00000538862 SUSD4Q5VX71 490 aa16.9■□□□□ 0.3
CDCA3-207ENST00000538862 ARHGAP27Q6ZUM4 889 aa16.9■□□□□ 0.3
CDCA3-207ENST00000538862 ZNF34Q8IZ26 560 aa16.9■□□□□ 0.3
CDCA3-207ENST00000538862 FMR1NBQ8N0W7 255 aaPredicted RBP16.9■□□□□ 0.3
CDCA3-207ENST00000538862 LINC00301Q8NCQ3 95 aa16.9■□□□□ 0.3
CDCA3-207ENST00000538862 KCNG4Q8TDN1 519 aa16.9■□□□□ 0.3
CDCA3-207ENST00000538862 HPS5Q9UPZ3 1129 aa16.9■□□□□ 0.3
CDCA3-207ENST00000538862 RIC1Q4ADV7 1423 aa16.9■□□□□ 0.3
CDCA3-207ENST00000538862 AKAP11Q9UKA4 1901 aa16.9■□□□□ 0.3
CDCA3-207ENST00000538862 BECN2A8MW95 431 aa16.9■□□□□ 0.3
CDCA3-207ENST00000538862 GTF2E1P29083 439 aaPredicted RBP16.9■□□□□ 0.3
CDCA3-207ENST00000538862 ANTXR2P58335 489 aa16.9■□□□□ 0.3
CDCA3-207ENST00000538862 NAT10Q9H0A0 1025 aaKnown RBP16.9■□□□□ 0.3
CDCA3-207ENST00000538862 GPHNQ9NQX3 736 aaPredicted RBP16.9■□□□□ 0.3
CDCA3-207ENST00000538862 ORC3Q9UBD5 711 aaPredicted RBP16.9■□□□□ 0.3
CDCA3-207ENST00000538862 TNRC6CQ9HCJ0 1690 aaKnown RBP16.89■□□□□ 0.3
CDCA3-207ENST00000538862 GOLGA8BA8MQT2 603 aa16.89■□□□□ 0.29
CDCA3-207ENST00000538862 METTL24Q5JXM2 366 aa16.89■□□□□ 0.29
CDCA3-207ENST00000538862 LDHAL6AQ6ZMR3 332 aa16.89■□□□□ 0.29
CDCA3-207ENST00000538862 CEP57L1Q8IYX8 460 aa16.89■□□□□ 0.29
CDCA3-207ENST00000538862 TTLL11Q8NHH1 800 aa16.89■□□□□ 0.29
CDCA3-207ENST00000538862 ZNF219Q9P2Y4 722 aaPredicted RBP16.89■□□□□ 0.29
CDCA3-207ENST00000538862 A0A0U1RQG5 324 aaPredicted RBP16.88■□□□□ 0.29
CDCA3-207ENST00000538862 CPLX1O14810 134 aa16.88■□□□□ 0.29
CDCA3-207ENST00000538862 ADD2P35612 726 aa16.88■□□□□ 0.29
CDCA3-207ENST00000538862 LRMPQ12912 555 aa16.88■□□□□ 0.29
CDCA3-207ENST00000538862 STK38Q15208 465 aa16.88■□□□□ 0.29
CDCA3-207ENST00000538862 ERFEQ4G0M1 354 aa16.88■□□□□ 0.29
CDCA3-207ENST00000538862 NLRP10Q86W26 655 aa16.88■□□□□ 0.29
CDCA3-207ENST00000538862 DHX40Q8IX18 779 aaKnown RBP16.88■□□□□ 0.29
CDCA3-207ENST00000538862 TTLL6Q8N841 843 aa16.88■□□□□ 0.29
CDCA3-207ENST00000538862 ANKRD18BA2A2Z9 1011 aa16.88■□□□□ 0.29
CDCA3-207ENST00000538862 ITGA6P23229 1130 aa16.88■□□□□ 0.29
CDCA3-207ENST00000538862 MCAMP43121 646 aa16.88■□□□□ 0.29
CDCA3-207ENST00000538862 UBE3CQ15386 1083 aa16.88■□□□□ 0.29
CDCA3-207ENST00000538862 MYSM1Q5VVJ2 828 aa16.88■□□□□ 0.29
CDCA3-207ENST00000538862 ZNF784Q8NCA9 323 aaPredicted RBP16.88■□□□□ 0.29
CDCA3-207ENST00000538862 CCDC85AQ96PX6 553 aaPredicted RBP16.88■□□□□ 0.29
CDCA3-207ENST00000538862 SLX4Q8IY92 1834 aa16.88■□□□□ 0.29
CDCA3-207ENST00000538862 MYH3P11055 1940 aa16.87■□□□□ 0.29
CDCA3-207ENST00000538862 PPFIA3O75145 1194 aa16.87■□□□□ 0.29
CDCA3-207ENST00000538862 TRDNQ13061 729 aa16.87■□□□□ 0.29
CDCA3-207ENST00000538862 SF3A1Q15459 793 aaKnown RBP16.87■□□□□ 0.29
CDCA3-207ENST00000538862 CACTINQ8WUQ7 758 aaKnown RBP16.87■□□□□ 0.29
CDCA3-207ENST00000538862 RIOK3O14730 519 aaKnown RBP16.86■□□□□ 0.29
CDCA3-207ENST00000538862 SPTLC2O15270 562 aa16.86■□□□□ 0.29
CDCA3-207ENST00000538862 NTSR2O95665 410 aa16.86■□□□□ 0.29
CDCA3-207ENST00000538862 SRGNP10124 158 aa16.86■□□□□ 0.29
CDCA3-207ENST00000538862 CTSWP56202 376 aa16.86■□□□□ 0.29
CDCA3-207ENST00000538862 CCDC144BQ3MJ40 725 aa16.86■□□□□ 0.29
CDCA3-207ENST00000538862 SYNE3Q6ZMZ3 975 aa16.86■□□□□ 0.29
CDCA3-207ENST00000538862 LRRC8AQ8IWT6 810 aa16.86■□□□□ 0.29
CDCA3-207ENST00000538862 CCDC144CPQ8IYA2 1237 aa16.86■□□□□ 0.29
CDCA3-207ENST00000538862 VGLL2Q8N8G2 317 aa16.86■□□□□ 0.29
CDCA3-207ENST00000538862 SDF4Q9BRK5 362 aa16.86■□□□□ 0.29
CDCA3-207ENST00000538862 NYXQ9GZU5 481 aa16.86■□□□□ 0.29
CDCA3-207ENST00000538862 CLIC4Q9Y696 253 aa16.86■□□□□ 0.29
CDCA3-207ENST00000538862 PI16Q6UXB8 463 aa16.86■□□□□ 0.29
CDCA3-207ENST00000538862 ZNF710Q8N1W2 664 aa16.86■□□□□ 0.29
CDCA3-207ENST00000538862 BPIFA3Q9BQP9 254 aa16.86■□□□□ 0.29
CDCA3-207ENST00000538862 GREM2Q9H772 168 aa16.86■□□□□ 0.29
CDCA3-207ENST00000538862 CNNM1Q9NRU3 951 aa16.86■□□□□ 0.29
CDCA3-207ENST00000538862 ANGEL1Q9UNK9 670 aaKnown RBP16.86■□□□□ 0.29
CDCA3-207ENST00000538862 A0A1B0GVL5 298 aa16.85■□□□□ 0.29
CDCA3-207ENST00000538862 CTIFO43310 598 aaKnown RBP16.85■□□□□ 0.29
CDCA3-207ENST00000538862 POLR3DP05423 398 aaPredicted RBP16.85■□□□□ 0.29
CDCA3-207ENST00000538862 NDUFA8P51970 172 aa16.85■□□□□ 0.29
CDCA3-207ENST00000538862 SLC9C2Q5TAH2 1124 aa16.85■□□□□ 0.29
CDCA3-207ENST00000538862 OTUD7BQ6GQQ9 843 aa16.85■□□□□ 0.29
CDCA3-207ENST00000538862 KIAA1468Q9P260 1216 aa16.85■□□□□ 0.29
CDCA3-207ENST00000538862 ZMYM6O95789 1325 aa16.85■□□□□ 0.29
CDCA3-207ENST00000538862 CDKL5O76039 1030 aa16.84■□□□□ 0.29
CDCA3-207ENST00000538862 PDE8BO95263 885 aa16.84■□□□□ 0.29
CDCA3-207ENST00000538862 UQCRFS1P1P0C7P4 283 aa16.84■□□□□ 0.29
CDCA3-207ENST00000538862 KIF23Q02241 960 aaPredicted RBP16.84■□□□□ 0.29
CDCA3-207ENST00000538862 ANO1Q5XXA6 986 aa16.84■□□□□ 0.29
CDCA3-207ENST00000538862 SYNE4Q8N205 404 aa16.84■□□□□ 0.29
CDCA3-207ENST00000538862 MASTLQ96GX5 879 aa16.84■□□□□ 0.29
CDCA3-207ENST00000538862 NBPF3Q9H094 633 aa16.84■□□□□ 0.29
CDCA3-207ENST00000538862 IRS4O14654 1257 aaPredicted RBP16.84■□□□□ 0.29
CDCA3-207ENST00000538862 C21orf2O43822 256 aa16.84■□□□□ 0.29
CDCA3-207ENST00000538862 ARID4AP29374 1257 aaPredicted RBP16.84■□□□□ 0.29
CDCA3-207ENST00000538862 RASSF7Q02833 373 aa16.84■□□□□ 0.29
CDCA3-207ENST00000538862 PARP10Q53GL7 1025 aa16.84■□□□□ 0.29
CDCA3-207ENST00000538862 C3orf67Q6ZVT6 689 aa16.84■□□□□ 0.29
CDCA3-207ENST00000538862 TMEM87BQ96K49 555 aa16.84■□□□□ 0.29
CDCA3-207ENST00000538862 UTP14AQ9BVJ6 771 aaKnown RBP16.84■□□□□ 0.29
CDCA3-207ENST00000538862 CCDC94Q9BW85 323 aaPredicted RBP16.84■□□□□ 0.29
CDCA3-207ENST00000538862 PAXBP1Q9Y5B6 917 aa16.84■□□□□ 0.29
CDCA3-207ENST00000538862 SBF1O95248 1867 aa16.84■□□□□ 0.29
CDCA3-207ENST00000538862 SMTNL1A8MU46 457 aa16.83■□□□□ 0.28
CDCA3-207ENST00000538862 SH2B2O14492 632 aaPredicted RBP16.83■□□□□ 0.28
CDCA3-207ENST00000538862 PDE8AO60658 829 aa16.83■□□□□ 0.28
CDCA3-207ENST00000538862 CMA1P23946 247 aa16.83■□□□□ 0.28
CDCA3-207ENST00000538862 ZRSR1Q15695 479 aaKnown RBP16.83■□□□□ 0.28
CDCA3-207ENST00000538862 ALX1Q15699 326 aa16.83■□□□□ 0.28
CDCA3-207ENST00000538862 CPLX2Q6PUV4 134 aaKnown RBP16.83■□□□□ 0.28
CDCA3-207ENST00000538862 TSC1Q92574 1164 aa16.83■□□□□ 0.28
CDCA3-207ENST00000538862 CCDC88AQ3V6T2 1871 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms