RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 GTF2A2P52657 109 aa18.38■□□□□ 0.53
RAB40B-202ENST00000538809 SH3BP5LQ7L8J4 393 aa18.38■□□□□ 0.53
RAB40B-202ENST00000538809 ZSCAN29Q8IWY8 852 aaPredicted RBP18.38■□□□□ 0.53
RAB40B-202ENST00000538809 CCDC8Q9H0W5 538 aaPredicted RBP18.38■□□□□ 0.53
RAB40B-202ENST00000538809 DBNLQ9UJU6 430 aaKnown RBP18.38■□□□□ 0.53
RAB40B-202ENST00000538809 GPR75-ASB3A0A0A6YYF3 556 aa18.37■□□□□ 0.53
RAB40B-202ENST00000538809 IRF6O14896 467 aa18.37■□□□□ 0.53
RAB40B-202ENST00000538809 ENTPD3O75355 529 aa18.37■□□□□ 0.53
RAB40B-202ENST00000538809 SLURP2P0DP57 97 aa18.37■□□□□ 0.53
RAB40B-202ENST00000538809 RHBDL3P58872 404 aa18.37■□□□□ 0.53
RAB40B-202ENST00000538809 PPIL2Q13356 520 aa18.37■□□□□ 0.53
RAB40B-202ENST00000538809 CCDC158Q5M9N0 1113 aa18.37■□□□□ 0.53
RAB40B-202ENST00000538809 ZBTB40Q9NUA8 1239 aa18.37■□□□□ 0.53
RAB40B-202ENST00000538809 LRP2BPQ9P2M1 347 aa18.37■□□□□ 0.53
RAB40B-202ENST00000538809 DDX19BQ9UMR2 479 aa18.37■□□□□ 0.53
RAB40B-202ENST00000538809 MYH7P12883 1935 aa18.37■□□□□ 0.53
RAB40B-202ENST00000538809 DDTLA6NHG4 134 aaPredicted RBP18.36■□□□□ 0.53
RAB40B-202ENST00000538809 MGAMO43451 1857 aa18.36■□□□□ 0.53
RAB40B-202ENST00000538809 GSTO1P78417 241 aa18.36■□□□□ 0.53
RAB40B-202ENST00000538809 TAF1CQ15572 869 aaPredicted RBP18.36■□□□□ 0.53
RAB40B-202ENST00000538809 FAM43AQ8N2R8 423 aa18.36■□□□□ 0.53
RAB40B-202ENST00000538809 EAF2Q96CJ1 260 aaPredicted RBP18.36■□□□□ 0.53
RAB40B-202ENST00000538809 ZNF112Q9UJU3 913 aa18.36■□□□□ 0.53
RAB40B-202ENST00000538809 HPS5Q9UPZ3 1129 aa18.36■□□□□ 0.53
RAB40B-202ENST00000538809 LDHCP07864 332 aa18.35■□□□□ 0.53
RAB40B-202ENST00000538809 ZAP70P43403 619 aa18.35■□□□□ 0.53
RAB40B-202ENST00000538809 SOX10P56693 466 aa18.35■□□□□ 0.53
RAB40B-202ENST00000538809 C20orf194Q5TEA3 1177 aa18.35■□□□□ 0.53
RAB40B-202ENST00000538809 CD99L2Q8TCZ2 262 aa18.35■□□□□ 0.53
RAB40B-202ENST00000538809 CYP2E1P05181 493 aaPredicted RBP18.34■□□□□ 0.53
RAB40B-202ENST00000538809 CETPP11597 493 aa18.34■□□□□ 0.53
RAB40B-202ENST00000538809 SNAPC2Q13487 334 aa18.34■□□□□ 0.53
RAB40B-202ENST00000538809 PDE3AQ14432 1141 aa18.34■□□□□ 0.53
RAB40B-202ENST00000538809 PKN2Q16513 984 aaKnown RBP18.34■□□□□ 0.53
RAB40B-202ENST00000538809 NOL9Q5SY16 702 aaKnown RBP18.34■□□□□ 0.53
RAB40B-202ENST00000538809 SIRT2Q8IXJ6 389 aa18.34■□□□□ 0.53
RAB40B-202ENST00000538809 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.34■□□□□ 0.53
RAB40B-202ENST00000538809 NAV1Q8NEY1 1877 aa18.34■□□□□ 0.53
RAB40B-202ENST00000538809 BTBD19C9JJ37 291 aa18.33■□□□□ 0.52
RAB40B-202ENST00000538809 APBB1O00213 710 aa18.33■□□□□ 0.52
RAB40B-202ENST00000538809 PPATQ06203 517 aa18.33■□□□□ 0.52
RAB40B-202ENST00000538809 NAA16Q6N069 864 aaPredicted RBP18.33■□□□□ 0.52
RAB40B-202ENST00000538809 FBXO46Q6PJ61 603 aaPredicted RBP18.33■□□□□ 0.52
RAB40B-202ENST00000538809 AACSQ86V21 672 aa18.33■□□□□ 0.52
RAB40B-202ENST00000538809 RPAP2Q8IXW5 612 aaPredicted RBP18.33■□□□□ 0.52
RAB40B-202ENST00000538809 PIH1D3Q9NQM4 214 aaKnown RBP18.33■□□□□ 0.52
RAB40B-202ENST00000538809 TRIM17Q9Y577 477 aa18.33■□□□□ 0.52
RAB40B-202ENST00000538809 NDUFB9Q9Y6M9 179 aa18.33■□□□□ 0.52
RAB40B-202ENST00000538809 COL2A1P02458 1487 aaPredicted RBP18.33■□□□□ 0.52
RAB40B-202ENST00000538809 LOC285556D6RIA3 1793 aa18.32■□□□□ 0.52
RAB40B-202ENST00000538809 RBBP6Q7Z6E9 1792 aaKnown RBP18.32■□□□□ 0.52
RAB40B-202ENST00000538809 HTTP42858 3142 aa18.32■□□□□ 0.52
RAB40B-202ENST00000538809 FAM196BA6NMK8 535 aa18.32■□□□□ 0.52
RAB40B-202ENST00000538809 PHF20L1A8MW92 1017 aa18.32■□□□□ 0.52
RAB40B-202ENST00000538809 CAP1Q01518 475 aa18.32■□□□□ 0.52
RAB40B-202ENST00000538809 OTOP1Q7RTM1 612 aa18.32■□□□□ 0.52
RAB40B-202ENST00000538809 ERC1Q8IUD2 1116 aa18.32■□□□□ 0.52
RAB40B-202ENST00000538809 TEX11Q8IYF3 940 aa18.32■□□□□ 0.52
RAB40B-202ENST00000538809 SH3RF3Q8TEJ3 882 aaPredicted RBP18.32■□□□□ 0.52
RAB40B-202ENST00000538809 ERO1AQ96HE7 468 aa18.32■□□□□ 0.52
RAB40B-202ENST00000538809 ZNF512BQ96KM6 892 aaPredicted RBP18.32■□□□□ 0.52
RAB40B-202ENST00000538809 NOL10Q9BSC4 688 aaKnown RBP18.32■□□□□ 0.52
RAB40B-202ENST00000538809 ZFYVE28Q9HCC9 887 aa18.32■□□□□ 0.52
RAB40B-202ENST00000538809 IL1RAPL2Q9NP60 686 aa18.32■□□□□ 0.52
RAB40B-202ENST00000538809 AATFQ9NY61 560 aaKnown RBP eCLIP18.32■□□□□ 0.524e-8■■■■■ 70.4
RAB40B-202ENST00000538809 SP3Q02447 781 aa18.31■□□□□ 0.52
RAB40B-202ENST00000538809 ADGRA1Q86SQ6 560 aa18.31■□□□□ 0.52
RAB40B-202ENST00000538809 SCYL3Q8IZE3 742 aa18.31■□□□□ 0.52
RAB40B-202ENST00000538809 OSBPL5Q9H0X9 879 aaPredicted RBP18.31■□□□□ 0.52
RAB40B-202ENST00000538809 BCL11AQ9H165 835 aa18.31■□□□□ 0.52
RAB40B-202ENST00000538809 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.31■□□□□ 0.52
RAB40B-202ENST00000538809 DDX60LQ5H9U9 1706 aaKnown RBP18.3■□□□□ 0.52
RAB40B-202ENST00000538809 MYH8P13535 1937 aa18.3■□□□□ 0.52
RAB40B-202ENST00000538809 RHPN1Q8TCX5 695 aa18.3■□□□□ 0.52
RAB40B-202ENST00000538809 KCNH4Q9UQ05 1017 aa18.3■□□□□ 0.52
RAB40B-202ENST00000538809 RGS19P49795 217 aa18.29■□□□□ 0.52
RAB40B-202ENST00000538809 MLLT1Q03111 559 aaPredicted RBP18.29■□□□□ 0.52
RAB40B-202ENST00000538809 HSP90AB4PQ58FF6 505 aa18.29■□□□□ 0.52
RAB40B-202ENST00000538809 PICK1Q9NRD5 415 aa18.29■□□□□ 0.52
RAB40B-202ENST00000538809 TNRC18O15417 2968 aaPredicted RBP18.28■□□□□ 0.52
RAB40B-202ENST00000538809 HMMRO75330 724 aa18.28■□□□□ 0.52
RAB40B-202ENST00000538809 NPM3O75607 178 aaKnown RBP18.28■□□□□ 0.52
RAB40B-202ENST00000538809 IDH1O75874 414 aaKnown RBP18.28■□□□□ 0.52
RAB40B-202ENST00000538809 MAP4K4O95819 1239 aaPredicted RBP18.28■□□□□ 0.52
RAB40B-202ENST00000538809 MAP3K10Q02779 954 aa18.28■□□□□ 0.52
RAB40B-202ENST00000538809 CCDC84Q86UT8 332 aaPredicted RBP18.28■□□□□ 0.52
RAB40B-202ENST00000538809 CHMP4BQ9H444 224 aaKnown RBP18.28■□□□□ 0.52
RAB40B-202ENST00000538809 ANTXR1Q9H6X2 564 aa18.28■□□□□ 0.52
RAB40B-202ENST00000538809 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.28■□□□□ 0.528e-8■■■■■ 28.7
RAB40B-202ENST00000538809 BAG3O95817 575 aa18.27■□□□□ 0.52
RAB40B-202ENST00000538809 PTPRAP18433 802 aa18.27■□□□□ 0.52
RAB40B-202ENST00000538809 CYP7A1P22680 504 aa18.27■□□□□ 0.52
RAB40B-202ENST00000538809 DYNLL1P63167 89 aaKnown RBP18.27■□□□□ 0.52
RAB40B-202ENST00000538809 MOGSQ13724 837 aa18.27■□□□□ 0.52
RAB40B-202ENST00000538809 MAPKAPK5Q8IW41 473 aa18.27■□□□□ 0.52
RAB40B-202ENST00000538809 EFCC1Q9HA90 598 aa18.27■□□□□ 0.52
RAB40B-202ENST00000538809 ZCCHC17Q9NP64 241 aaKnown RBP18.27■□□□□ 0.52
RAB40B-202ENST00000538809 ZHX2Q9Y6X8 837 aa18.27■□□□□ 0.52
RAB40B-202ENST00000538809 CENPFP49454 3210 aa18.27■□□□□ 0.52
RAB40B-202ENST00000538809 BAZ2AQ9UIF9 1905 aaKnown RBP18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms