RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 CDKL5O76039 1030 aa13.82□□□□□ -0.2
CPNE8-203ENST00000538596 LONRF3Q496Y0 759 aa13.82□□□□□ -0.2
CPNE8-203ENST00000538596 HSP90AA4PQ58FG1 418 aa13.82□□□□□ -0.2
CPNE8-203ENST00000538596 FOXP4Q8IVH2 680 aaPredicted RBP13.82□□□□□ -0.2
CPNE8-203ENST00000538596 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.82□□□□□ -0.2
CPNE8-203ENST00000538596 KCNJ14Q9UNX9 436 aa13.82□□□□□ -0.2
CPNE8-203ENST00000538596 SLIT2O94813 1529 aa13.82□□□□□ -0.2
CPNE8-203ENST00000538596 ECM29Q5VYK3 1845 aa13.82□□□□□ -0.2
CPNE8-203ENST00000538596 PATL2C9JE40 543 aaKnown RBP13.82□□□□□ -0.2
CPNE8-203ENST00000538596 SMIM22K7EJ46 135 aa13.82□□□□□ -0.2
CPNE8-203ENST00000538596 FANCCQ00597 558 aa13.82□□□□□ -0.2
CPNE8-203ENST00000538596 GRIN1Q05586 938 aa13.82□□□□□ -0.2
CPNE8-203ENST00000538596 GOLGA8FQ08AF8 430 aa13.82□□□□□ -0.2
CPNE8-203ENST00000538596 GOLGA8DPQ0D2H9 430 aa13.82□□□□□ -0.2
CPNE8-203ENST00000538596 MIGA1Q8NAN2 632 aa13.82□□□□□ -0.2
CPNE8-203ENST00000538596 TMEM87BQ96K49 555 aa13.82□□□□□ -0.2
CPNE8-203ENST00000538596 IQSEC3Q9UPP2 1182 aaPredicted RBP13.82□□□□□ -0.2
CPNE8-203ENST00000538596 SLC12A7Q9Y666 1083 aa13.82□□□□□ -0.2
CPNE8-203ENST00000538596 GSG1L2A8MUP6 293 aa13.81□□□□□ -0.2
CPNE8-203ENST00000538596 BTBD18B2RXH4 712 aa13.81□□□□□ -0.2
CPNE8-203ENST00000538596 BCAMP50895 628 aa13.81□□□□□ -0.2
CPNE8-203ENST00000538596 GSDMDP57764 484 aa13.81□□□□□ -0.2
CPNE8-203ENST00000538596 SUSD4Q5VX71 490 aa13.81□□□□□ -0.2
CPNE8-203ENST00000538596 CPLX2Q6PUV4 134 aaKnown RBP13.81□□□□□ -0.2
CPNE8-203ENST00000538596 METTL16Q86W50 562 aaKnown RBP13.81□□□□□ -0.2
CPNE8-203ENST00000538596 LCORLQ8N3X6 602 aa13.81□□□□□ -0.2
CPNE8-203ENST00000538596 UQCRFS1P1P0C7P4 283 aa13.81□□□□□ -0.2
CPNE8-203ENST00000538596 PIP4K2BP78356 416 aa13.81□□□□□ -0.2
CPNE8-203ENST00000538596 SGMS1Q86VZ5 419 aa13.81□□□□□ -0.2
CPNE8-203ENST00000538596 SMAP1Q8IYB5 467 aaPredicted RBP13.81□□□□□ -0.2
CPNE8-203ENST00000538596 BCL9O00512 1426 aa13.81□□□□□ -0.2
CPNE8-203ENST00000538596 LRP6O75581 1613 aa13.81□□□□□ -0.2
CPNE8-203ENST00000538596 PPP6R2O75170 966 aa13.81□□□□□ -0.2
CPNE8-203ENST00000538596 TRIM29Q14134 588 aa13.81□□□□□ -0.2
CPNE8-203ENST00000538596 RESP18Q5W5W9 173 aa13.81□□□□□ -0.2
CPNE8-203ENST00000538596 PKNOX2Q96KN3 472 aa13.81□□□□□ -0.2
CPNE8-203ENST00000538596 TUBE1Q9UJT0 475 aa13.81□□□□□ -0.2
CPNE8-203ENST00000538596 NHSL1Q5SYE7 1610 aa13.8□□□□□ -0.2
CPNE8-203ENST00000538596 ROBO1Q9Y6N7 1651 aa13.8□□□□□ -0.2
CPNE8-203ENST00000538596 ZSCAN20P17040 1043 aaPredicted RBP13.8□□□□□ -0.2
CPNE8-203ENST00000538596 SFPQP23246 707 aaKnown RBP eCLIP13.8□□□□□ -0.2
CPNE8-203ENST00000538596 SSRP1Q08945 709 aaKnown RBP13.8□□□□□ -0.2
CPNE8-203ENST00000538596 ZNF34Q8IZ26 560 aa13.8□□□□□ -0.2
CPNE8-203ENST00000538596 IMPACTQ9P2X3 320 aa13.8□□□□□ -0.2
CPNE8-203ENST00000538596 WTIPA6NIX2 430 aaPredicted RBP13.8□□□□□ -0.2
CPNE8-203ENST00000538596 NPHP1O15259 732 aa13.8□□□□□ -0.2
CPNE8-203ENST00000538596 BMP6P22004 513 aa13.8□□□□□ -0.2
CPNE8-203ENST00000538596 TOB1P50616 345 aaPredicted RBP13.8□□□□□ -0.2
CPNE8-203ENST00000538596 PDE4BQ07343 736 aa13.8□□□□□ -0.2
CPNE8-203ENST00000538596 MAP3K12Q12852 859 aa13.8□□□□□ -0.2
CPNE8-203ENST00000538596 PPP1R13BQ96KQ4 1090 aa13.8□□□□□ -0.2
CPNE8-203ENST00000538596 MPHOSPH8Q99549 860 aa13.8□□□□□ -0.2
CPNE8-203ENST00000538596 MROH5Q6ZUA9 1318 aa13.79□□□□□ -0.2
CPNE8-203ENST00000538596 TMEM232C9JQI7 657 aa13.79□□□□□ -0.2
CPNE8-203ENST00000538596 SLC5A1P13866 664 aa13.79□□□□□ -0.2
CPNE8-203ENST00000538596 ATP2B1P20020 1258 aa13.79□□□□□ -0.2
CPNE8-203ENST00000538596 TDO2P48775 406 aa13.79□□□□□ -0.2
CPNE8-203ENST00000538596 AKNAD1Q5T1N1 836 aa13.79□□□□□ -0.2
CPNE8-203ENST00000538596 MFSD6Q6ZSS7 791 aa13.79□□□□□ -0.2
CPNE8-203ENST00000538596 TIGD1Q96MW7 591 aa13.79□□□□□ -0.2
CPNE8-203ENST00000538596 PRDM4Q9UKN5 801 aa13.79□□□□□ -0.2
CPNE8-203ENST00000538596 KCNH3Q9ULD8 1083 aa13.79□□□□□ -0.2
CPNE8-203ENST00000538596 PCDHA5Q9Y5H7 936 aa13.79□□□□□ -0.2
CPNE8-203ENST00000538596 SLC4A4Q9Y6R1 1079 aa13.79□□□□□ -0.2
CPNE8-203ENST00000538596 TPM4P67936 248 aa13.79□□□□□ -0.2
CPNE8-203ENST00000538596 NR5A1Q13285 461 aa13.79□□□□□ -0.2
CPNE8-203ENST00000538596 ALX1Q15699 326 aa13.79□□□□□ -0.2
CPNE8-203ENST00000538596 JMYQ8N9B5 988 aa13.79□□□□□ -0.2
CPNE8-203ENST00000538596 CNNM3Q8NE01 707 aa13.79□□□□□ -0.2
CPNE8-203ENST00000538596 ANKRD36CQ5JPF3 1778 aa13.79□□□□□ -0.2
CPNE8-203ENST00000538596 SERPINC1P01008 464 aa13.78□□□□□ -0.2
CPNE8-203ENST00000538596 LIFRP42702 1097 aa13.78□□□□□ -0.2
CPNE8-203ENST00000538596 SYT10Q6XYQ8 523 aa13.78□□□□□ -0.2
CPNE8-203ENST00000538596 NOSTRINQ8IVI9 506 aa13.78□□□□□ -0.2
CPNE8-203ENST00000538596 DIS3L2Q8IYB7 885 aaKnown RBP13.78□□□□□ -0.2
CPNE8-203ENST00000538596 LRRN4CLQ8ND94 238 aa13.78□□□□□ -0.2
CPNE8-203ENST00000538596 FANCLQ9NW38 375 aa13.78□□□□□ -0.2
CPNE8-203ENST00000538596 IKBKBO14920 756 aa13.78□□□□□ -0.2
CPNE8-203ENST00000538596 FMNL1O95466 1100 aaPredicted RBP13.78□□□□□ -0.2
CPNE8-203ENST00000538596 UBASH3AP57075 661 aa13.78□□□□□ -0.2
CPNE8-203ENST00000538596 KRBA2Q6ZNG9 492 aa13.78□□□□□ -0.2
CPNE8-203ENST00000538596 ADGRA1Q86SQ6 560 aa13.78□□□□□ -0.2
CPNE8-203ENST00000538596 GRAMD1CQ8IYS0 662 aa13.78□□□□□ -0.2
CPNE8-203ENST00000538596 KIF18AQ8NI77 898 aa13.78□□□□□ -0.2
CPNE8-203ENST00000538596 NUP133Q8WUM0 1156 aa13.78□□□□□ -0.2
CPNE8-203ENST00000538596 CHD4Q14839 1912 aa13.78□□□□□ -0.2
CPNE8-203ENST00000538596 ERVV-1B6SEH8 477 aa13.77□□□□□ -0.2
CPNE8-203ENST00000538596 IGSF3O75054 1194 aa13.77□□□□□ -0.2
CPNE8-203ENST00000538596 IL6STP40189 918 aaPredicted RBP13.77□□□□□ -0.2
CPNE8-203ENST00000538596 MYL5Q02045 173 aa13.77□□□□□ -0.2
CPNE8-203ENST00000538596 SYCP1Q15431 976 aa13.77□□□□□ -0.2
CPNE8-203ENST00000538596 ZNF827Q17R98 1081 aa13.77□□□□□ -0.2
CPNE8-203ENST00000538596 CFAP100Q494V2 611 aa13.77□□□□□ -0.2
CPNE8-203ENST00000538596 CCDC150Q8NCX0 1101 aa13.77□□□□□ -0.2
CPNE8-203ENST00000538596 OXER1Q8TDS5 423 aa13.77□□□□□ -0.2
CPNE8-203ENST00000538596 SDR42E1Q8WUS8 393 aa13.77□□□□□ -0.2
CPNE8-203ENST00000538596 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.77□□□□□ -0.2
CPNE8-203ENST00000538596 CUTAO60888 179 aa13.77□□□□□ -0.21
CPNE8-203ENST00000538596 MMP1P03956 469 aa13.77□□□□□ -0.21
CPNE8-203ENST00000538596 PRR29P0C7W0 189 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms