RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 NPC1L1Q9UHC9 1359 aa7.71□□□□□ -1.17
SORT1-209ENST00000538502 TSPY3P0CV98 308 aa7.71□□□□□ -1.17
SORT1-209ENST00000538502 TSPY8P0CW00 308 aa7.71□□□□□ -1.17
SORT1-209ENST00000538502 SDCCAG8Q86SQ7 713 aaPredicted RBP7.71□□□□□ -1.17
SORT1-209ENST00000538502 TUBB6Q9BUF5 446 aa7.71□□□□□ -1.17
SORT1-209ENST00000538502 CABP5Q9NP86 173 aa7.71□□□□□ -1.17
SORT1-209ENST00000538502 BAIAP2L1Q9UHR4 511 aa7.71□□□□□ -1.17
SORT1-209ENST00000538502 KCNH3Q9ULD8 1083 aa7.71□□□□□ -1.17
SORT1-209ENST00000538502 DEXIO95424 95 aa7.71□□□□□ -1.17
SORT1-209ENST00000538502 HAND2P61296 217 aa7.71□□□□□ -1.17
SORT1-209ENST00000538502 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.71□□□□□ -1.17
SORT1-209ENST00000538502 TBC1D31Q96DN5 1066 aa7.71□□□□□ -1.17
SORT1-209ENST00000538502 GLT8D2Q9H1C3 349 aa7.71□□□□□ -1.17
SORT1-209ENST00000538502 BABAM1Q9NWV8 329 aa7.71□□□□□ -1.17
SORT1-209ENST00000538502 TRMT112Q9UI30 125 aaKnown RBP7.71□□□□□ -1.17
SORT1-209ENST00000538502 TNFAIP3P21580 790 aa7.71□□□□□ -1.18
SORT1-209ENST00000538502 NAPAP54920 295 aa7.71□□□□□ -1.18
SORT1-209ENST00000538502 ITIH3Q06033 890 aa7.71□□□□□ -1.18
SORT1-209ENST00000538502 CCDC84Q86UT8 332 aaPredicted RBP7.71□□□□□ -1.18
SORT1-209ENST00000538502 CCHCR1Q8TD31 782 aa7.71□□□□□ -1.18
SORT1-209ENST00000538502 GRK7Q8WTQ7 553 aa7.71□□□□□ -1.18
SORT1-209ENST00000538502 MEIS3Q99687 375 aa7.71□□□□□ -1.18
SORT1-209ENST00000538502 PLCB3Q01970 1234 aa7.71□□□□□ -1.18
SORT1-209ENST00000538502 CCDC152Q4G0S7 254 aa7.71□□□□□ -1.18
SORT1-209ENST00000538502 NBPF6Q5VWK0 638 aa7.71□□□□□ -1.18
SORT1-209ENST00000538502 SND1Q7KZF4 910 aaKnown RBP eCLIP7.71□□□□□ -1.188e-7■■■■□ 25.9
SORT1-209ENST00000538502 TRIML1Q8N9V2 468 aa7.71□□□□□ -1.18
SORT1-209ENST00000538502 MICAL1Q8TDZ2 1067 aa7.71□□□□□ -1.18
SORT1-209ENST00000538502 EXOC4Q96A65 974 aa7.71□□□□□ -1.18
SORT1-209ENST00000538502 DDX27Q96GQ7 796 aaKnown RBP7.71□□□□□ -1.18
SORT1-209ENST00000538502 NBPF4Q96M43 638 aa7.71□□□□□ -1.18
SORT1-209ENST00000538502 HAUS8Q9BT25 410 aa7.71□□□□□ -1.18
SORT1-209ENST00000538502 RRP15Q9Y3B9 282 aaKnown RBP7.71□□□□□ -1.18
SORT1-209ENST00000538502 HOXA7P31268 230 aaPredicted RBP7.71□□□□□ -1.18
SORT1-209ENST00000538502 ZKSCAN8Q15776 578 aaPredicted RBP7.71□□□□□ -1.18
SORT1-209ENST00000538502 RASEFQ8IZ41 740 aa7.71□□□□□ -1.18
SORT1-209ENST00000538502 HYOU1Q9Y4L1 999 aa7.71□□□□□ -1.18
SORT1-209ENST00000538502 SLC4A4Q9Y6R1 1079 aa7.71□□□□□ -1.18
SORT1-209ENST00000538502 ABCA10Q8WWZ4 1543 aa7.71□□□□□ -1.18
SORT1-209ENST00000538502 GRM8O00222 908 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 WASLO00401 505 aaPredicted RBP7.7□□□□□ -1.18
SORT1-209ENST00000538502 SNRPA1P09661 255 aaKnown RBP7.7□□□□□ -1.18
SORT1-209ENST00000538502 ZC3H6P61129 1189 aaKnown RBP7.7□□□□□ -1.18
SORT1-209ENST00000538502 HEATR3Q7Z4Q2 680 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 PROSER2Q86WR7 435 aaPredicted RBP7.7□□□□□ -1.18
SORT1-209ENST00000538502 CCT6BQ92526 530 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 TM6SF1Q9BZW5 370 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 GOLGA8QA0A0J9YX86 632 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 GOLGA8OA6NCC3 632 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 GOLGA8NF8WBI6 632 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 PPFIA2O75334 1257 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 FLOT1O75955 427 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 STK10O94804 968 aaKnown RBP7.7□□□□□ -1.18
SORT1-209ENST00000538502 ANKRD20A3Q5VUR7 823 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 DDX21Q9NR30 783 aaKnown RBP eCLIP7.7□□□□□ -1.18
SORT1-209ENST00000538502 TYW1Q9NV66 732 aaKnown RBP7.7□□□□□ -1.18
SORT1-209ENST00000538502 BLMP54132 1417 aaPredicted RBP7.7□□□□□ -1.18
SORT1-209ENST00000538502 BRD1O95696 1058 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 ERCC3P19447 782 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 RPS6KA1Q15418 735 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 KSR2Q6VAB6 950 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 LDHAL6AQ6ZMR3 332 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 ZKSCAN3Q9BRR0 538 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 PI4KAP2A4QPH2 592 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 RGS16O15492 202 aaPredicted RBP7.7□□□□□ -1.18
SORT1-209ENST00000538502 RFC1P35251 1148 aaPredicted RBP7.7□□□□□ -1.18
SORT1-209ENST00000538502 PI4KAP1Q8N8J0 262 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 BBOF1Q8ND07 529 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 TCP1P17987 556 aaKnown RBP7.7□□□□□ -1.18
SORT1-209ENST00000538502 PHBP35232 272 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 APOBRQ0VD83 1088 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 NBPF14Q5TI25 921 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 LRRC8AQ8IWT6 810 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 PRAG1Q86YV5 1406 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 DUOX2Q9NRD8 1548 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 SPOPO43791 374 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 KIF1CO43896 1103 aaKnown RBP7.7□□□□□ -1.18
SORT1-209ENST00000538502 MCM7P33993 719 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 STX17P56962 302 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 HSP90AA4PQ58FG1 418 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 OSCARQ8IYS5 282 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 C14orf93Q9H972 538 aaKnown RBP7.7□□□□□ -1.18
SORT1-209ENST00000538502 ANKIB1Q9P2G1 1089 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 TRIM35Q9UPQ4 493 aa7.7□□□□□ -1.18
SORT1-209ENST00000538502 CFAP43Q8NDM7 1665 aa7.69□□□□□ -1.18
SORT1-209ENST00000538502 A0A1B0GVL5 298 aa7.69□□□□□ -1.18
SORT1-209ENST00000538502 RBM6P78332 1123 aaKnown RBP7.69□□□□□ -1.18
SORT1-209ENST00000538502 STX10O60499 249 aa7.69□□□□□ -1.18
SORT1-209ENST00000538502 ARID5AQ03989 594 aa7.69□□□□□ -1.18
SORT1-209ENST00000538502 EIF2AQ9BY44 585 aaKnown RBP7.69□□□□□ -1.18
SORT1-209ENST00000538502 FAM204AQ9H8W3 233 aa7.69□□□□□ -1.18
SORT1-209ENST00000538502 BIVM-ERCC5R4GMW8 1640 aa7.69□□□□□ -1.18
SORT1-209ENST00000538502 ZNF202O95125 648 aa7.69□□□□□ -1.18
SORT1-209ENST00000538502 POSTNQ15063 836 aa7.69□□□□□ -1.18
SORT1-209ENST00000538502 TACC3Q9Y6A5 838 aa7.69□□□□□ -1.18
SORT1-209ENST00000538502 ZPR1O75312 459 aa7.69□□□□□ -1.18
SORT1-209ENST00000538502 CCT6AP40227 531 aaKnown RBP7.69□□□□□ -1.18
SORT1-209ENST00000538502 ETF1P62495 437 aaKnown RBP7.69□□□□□ -1.18
SORT1-209ENST00000538502 STAG1Q8WVM7 1258 aa7.69□□□□□ -1.18
SORT1-209ENST00000538502 SAMM50Q9Y512 469 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms