RNA–Protein interactions for RNA: ENST00000538494.1

SP140-212, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 629 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-212ENST00000538494 RPS12P25398 132 aaKnown RBP7.42□□□□□ -1.22
SP140-212ENST00000538494 BMP8BP34820 402 aa7.42□□□□□ -1.22
SP140-212ENST00000538494 INHBEP58166 350 aa7.42□□□□□ -1.22
SP140-212ENST00000538494 SREBF2Q12772 1141 aa7.42□□□□□ -1.22
SP140-212ENST00000538494 QPCTQ16769 361 aa7.42□□□□□ -1.22
SP140-212ENST00000538494 ZNF652Q9Y2D9 606 aa7.42□□□□□ -1.22
SP140-212ENST00000538494 ZNF609O15014 1411 aa7.42□□□□□ -1.22
SP140-212ENST00000538494 ZBTB7BO15156 539 aaPredicted RBP7.41□□□□□ -1.22
SP140-212ENST00000538494 SRSF11Q05519 484 aaKnown RBP7.41□□□□□ -1.22
SP140-212ENST00000538494 PLA2G4EQ3MJ16 856 aa7.41□□□□□ -1.22
SP140-212ENST00000538494 LRIT3Q3SXY7 679 aa7.41□□□□□ -1.22
SP140-212ENST00000538494 ZNF790Q6PG37 636 aa7.41□□□□□ -1.22
SP140-212ENST00000538494 DEFB123Q8N688 67 aa7.41□□□□□ -1.22
SP140-212ENST00000538494 ERO1AQ96HE7 468 aa7.41□□□□□ -1.22
SP140-212ENST00000538494 KCTD15Q96SI1 283 aaPredicted RBP7.41□□□□□ -1.22
SP140-212ENST00000538494 ZNF395Q9H8N7 513 aaPredicted RBP7.41□□□□□ -1.22
SP140-212ENST00000538494 ENAMQ9NRM1 1142 aa7.41□□□□□ -1.22
SP140-212ENST00000538494 LIMD1Q9UGP4 676 aa7.41□□□□□ -1.22
SP140-212ENST00000538494 NIP7Q9Y221 180 aaKnown RBP eCLIP7.41□□□□□ -1.22
SP140-212ENST00000538494 NCOR1O75376 2440 aa7.41□□□□□ -1.22
SP140-212ENST00000538494 ZNF646O15015 1829 aaPredicted RBP7.41□□□□□ -1.22
SP140-212ENST00000538494 PDE4DQ08499 809 aa7.4□□□□□ -1.22
SP140-212ENST00000538494 TBC1D10BQ4KMP7 808 aaPredicted RBP7.4□□□□□ -1.22
SP140-212ENST00000538494 NBPF11Q86T75 865 aa7.4□□□□□ -1.22
SP140-212ENST00000538494 PARP9Q8IXQ6 854 aa7.4□□□□□ -1.22
SP140-212ENST00000538494 EFCC1Q9HA90 598 aa7.4□□□□□ -1.22
SP140-212ENST00000538494 CNTNAP5Q8WYK1 1306 aa7.4□□□□□ -1.22
SP140-212ENST00000538494 ABCC12Q96J65 1359 aa7.4□□□□□ -1.22
SP140-212ENST00000538494 IBTKQ9P2D0 1353 aaPredicted RBP7.4□□□□□ -1.22
SP140-212ENST00000538494 LAMB4A4D0S4 1761 aa7.4□□□□□ -1.23
SP140-212ENST00000538494 SYNGAP1Q96PV0 1343 aa7.39□□□□□ -1.23
SP140-212ENST00000538494 WTIPA6NIX2 430 aaPredicted RBP7.39□□□□□ -1.23
SP140-212ENST00000538494 PSMD14O00487 310 aa7.39□□□□□ -1.23
SP140-212ENST00000538494 ZNF280AP59817 542 aaPredicted RBP7.39□□□□□ -1.23
SP140-212ENST00000538494 DHX9Q08211 1270 aaKnown RBP7.39□□□□□ -1.23
SP140-212ENST00000538494 LDLRAD1Q5T700 205 aa7.39□□□□□ -1.23
SP140-212ENST00000538494 SULT6B1Q6IMI4 303 aa7.39□□□□□ -1.23
SP140-212ENST00000538494 MOB2Q70IA6 237 aa7.39□□□□□ -1.23
SP140-212ENST00000538494 SP8Q8IXZ3 490 aa7.39□□□□□ -1.23
SP140-212ENST00000538494 HELBQ8NG08 1087 aaPredicted RBP7.39□□□□□ -1.23
SP140-212ENST00000538494 RNF217Q8TC41 542 aa7.39□□□□□ -1.23
SP140-212ENST00000538494 DPF3Q92784 378 aa7.39□□□□□ -1.23
SP140-212ENST00000538494 GPKOWQ92917 476 aaPredicted RBP eCLIP7.39□□□□□ -1.23
SP140-212ENST00000538494 SHISA4Q96DD7 197 aa7.39□□□□□ -1.23
SP140-212ENST00000538494 RBM17Q96I25 401 aaKnown RBP7.39□□□□□ -1.23
SP140-212ENST00000538494 SPOCK3Q9BQ16 436 aa7.39□□□□□ -1.23
SP140-212ENST00000538494 NYXQ9GZU5 481 aa7.39□□□□□ -1.23
SP140-212ENST00000538494 GGA3Q9NZ52 723 aa7.39□□□□□ -1.23
SP140-212ENST00000538494 ASTN2O75129 1339 aaPredicted RBP7.38□□□□□ -1.23
SP140-212ENST00000538494 UBE2Q2LH0YL09 131 aa7.38□□□□□ -1.23
SP140-212ENST00000538494 LILRB3O75022 631 aa7.38□□□□□ -1.23
SP140-212ENST00000538494 BBOX1O75936 387 aa7.38□□□□□ -1.23
SP140-212ENST00000538494 VIL1P09327 827 aaKnown RBP7.38□□□□□ -1.23
SP140-212ENST00000538494 GAS6Q14393 721 aa7.38□□□□□ -1.23
SP140-212ENST00000538494 HLFQ16534 295 aa7.38□□□□□ -1.23
SP140-212ENST00000538494 KIF4BQ2VIQ3 1234 aa7.38□□□□□ -1.23
SP140-212ENST00000538494 SLC10A5Q5PT55 438 aa7.38□□□□□ -1.23
SP140-212ENST00000538494 Q7L0L9 218 aa7.38□□□□□ -1.23
SP140-212ENST00000538494 NPM2Q86SE8 214 aaKnown RBP7.38□□□□□ -1.23
SP140-212ENST00000538494 TTC5Q8N0Z6 440 aa7.38□□□□□ -1.23
SP140-212ENST00000538494 CD99L2Q8TCZ2 262 aa7.38□□□□□ -1.23
SP140-212ENST00000538494 RPGRQ92834 1020 aaKnown RBP7.38□□□□□ -1.23
SP140-212ENST00000538494 SLC10A4Q96EP9 437 aa7.38□□□□□ -1.23
SP140-212ENST00000538494 GDF15Q99988 308 aa7.38□□□□□ -1.23
SP140-212ENST00000538494 ARHGAP9Q9BRR9 750 aa7.38□□□□□ -1.23
SP140-212ENST00000538494 ZNF330Q9Y3S2 320 aaPredicted RBP7.38□□□□□ -1.23
SP140-212ENST00000538494 USP16Q9Y5T5 823 aa7.38□□□□□ -1.23
SP140-212ENST00000538494 NR2E3Q9Y5X4 410 aa7.38□□□□□ -1.23
SP140-212ENST00000538494 RTL9Q8NET4 1388 aa7.37□□□□□ -1.23
SP140-212ENST00000538494 MANSC4A6NHS7 340 aaPredicted RBP7.37□□□□□ -1.23
SP140-212ENST00000538494 PHF20L1A8MW92 1017 aa7.37□□□□□ -1.23
SP140-212ENST00000538494 ERVV-1B6SEH8 477 aa7.37□□□□□ -1.23
SP140-212ENST00000538494 IGF2BP3O00425 579 aaKnown RBP eCLIP7.37□□□□□ -1.23
SP140-212ENST00000538494 IL13P35225 146 aa7.37□□□□□ -1.23
SP140-212ENST00000538494 SP3Q02447 781 aa7.37□□□□□ -1.23
SP140-212ENST00000538494 RTL5Q5HYW3 569 aaPredicted RBP7.37□□□□□ -1.23
SP140-212ENST00000538494 FAM109BQ6ICB4 259 aaPredicted RBP7.37□□□□□ -1.23
SP140-212ENST00000538494 FMNL2Q96PY5 1086 aa7.37□□□□□ -1.23
SP140-212ENST00000538494 SIN3AQ96ST3 1273 aa7.37□□□□□ -1.23
SP140-212ENST00000538494 HTATIP2Q9BUP3 242 aa7.37□□□□□ -1.23
SP140-212ENST00000538494 CUEDC1Q9NWM3 386 aaPredicted RBP7.37□□□□□ -1.23
SP140-212ENST00000538494 SIPA1L3O60292 1781 aaPredicted RBP7.37□□□□□ -1.23
SP140-212ENST00000538494 DUOX1Q9NRD9 1551 aa7.37□□□□□ -1.23
SP140-212ENST00000538494 UNCXA6NJT0 531 aa7.36□□□□□ -1.23
SP140-212ENST00000538494 ZBTB48P10074 688 aaPredicted RBP7.36□□□□□ -1.23
SP140-212ENST00000538494 GTF2E1P29083 439 aaPredicted RBP7.36□□□□□ -1.23
SP140-212ENST00000538494 MTHFSDQ2M296 383 aaKnown RBP7.36□□□□□ -1.23
SP140-212ENST00000538494 SLC4A8Q2Y0W8 1093 aa7.36□□□□□ -1.23
SP140-212ENST00000538494 SLC9C1Q4G0N8 1177 aa7.36□□□□□ -1.23
SP140-212ENST00000538494 INTS6LQ5JSJ4 861 aaKnown RBP7.36□□□□□ -1.23
SP140-212ENST00000538494 MYSM1Q5VVJ2 828 aa7.36□□□□□ -1.23
SP140-212ENST00000538494 NBPF10Q6P3W6 841 aaKnown RBP7.36□□□□□ -1.23
SP140-212ENST00000538494 DPP8Q6V1X1 898 aaPredicted RBP7.36□□□□□ -1.23
SP140-212ENST00000538494 ZBTB33Q86T24 672 aa7.36□□□□□ -1.23
SP140-212ENST00000538494 BEND7Q8N7W2 519 aaPredicted RBP7.36□□□□□ -1.23
SP140-212ENST00000538494 IL17REQ8NFR9 667 aa7.36□□□□□ -1.23
SP140-212ENST00000538494 FAM122AQ96E09 287 aa7.36□□□□□ -1.23
SP140-212ENST00000538494 GMLQ99445 158 aa7.36□□□□□ -1.23
SP140-212ENST00000538494 CDV3Q9UKY7 258 aaKnown RBP7.36□□□□□ -1.23
SP140-212ENST00000538494 PTCH2Q9Y6C5 1203 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms