RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 POP1Q99575 1024 aaKnown RBP11.95□□□□□ -0.5
CD9-207ENST00000538418 GABBR1Q9UBS5 961 aa11.95□□□□□ -0.5
CD9-207ENST00000538418 ZBTB42B2RXF5 422 aa11.94□□□□□ -0.5
CD9-207ENST00000538418 CDKN1CP49918 316 aaPredicted RBP11.94□□□□□ -0.5
CD9-207ENST00000538418 PRR20EP86478 221 aa11.94□□□□□ -0.5
CD9-207ENST00000538418 PRR20CP86479 221 aa11.94□□□□□ -0.5
CD9-207ENST00000538418 PRR20DP86480 221 aa11.94□□□□□ -0.5
CD9-207ENST00000538418 PRR20BP86481 221 aa11.94□□□□□ -0.5
CD9-207ENST00000538418 PRR20AP86496 221 aa11.94□□□□□ -0.5
CD9-207ENST00000538418 UBAP2LQ14157 1087 aaKnown RBP11.94□□□□□ -0.5
CD9-207ENST00000538418 ZNF423Q2M1K9 1284 aa11.94□□□□□ -0.5
CD9-207ENST00000538418 LRRFIP1Q32MZ4 808 aaKnown RBP11.94□□□□□ -0.5
CD9-207ENST00000538418 TM4SF20Q53R12 229 aa11.94□□□□□ -0.5
CD9-207ENST00000538418 SCARA3Q6AZY7 606 aa11.94□□□□□ -0.5
CD9-207ENST00000538418 EEPD1Q7L9B9 569 aa11.94□□□□□ -0.5
CD9-207ENST00000538418 NINJ1Q92982 152 aa11.94□□□□□ -0.5
CD9-207ENST00000538418 MFSD3Q96ES6 412 aa11.94□□□□□ -0.5
CD9-207ENST00000538418 ANTXR1Q9H6X2 564 aa11.94□□□□□ -0.5
CD9-207ENST00000538418 HCN2Q9UL51 889 aa11.94□□□□□ -0.5
CD9-207ENST00000538418 MEIS3P2A8K0S8 358 aa11.93□□□□□ -0.5
CD9-207ENST00000538418 KCNQ2O43526 872 aa11.93□□□□□ -0.5
CD9-207ENST00000538418 FAM153BP0C7A2 387 aa11.93□□□□□ -0.5
CD9-207ENST00000538418 EXOSC10Q01780 885 aaKnown RBP11.93□□□□□ -0.5
CD9-207ENST00000538418 PTPN11Q06124 597 aaPredicted RBP11.93□□□□□ -0.5
CD9-207ENST00000538418 HFE2Q6ZVN8 426 aa11.93□□□□□ -0.5
CD9-207ENST00000538418 ZSCAN1Q8NBB4 408 aa11.93□□□□□ -0.5
CD9-207ENST00000538418 UPK3BL1B0FP48 263 aa11.92□□□□□ -0.5
CD9-207ENST00000538418 UPK3BL2E5RIL1 263 aa11.92□□□□□ -0.5
CD9-207ENST00000538418 PEX14O75381 377 aa11.92□□□□□ -0.5
CD9-207ENST00000538418 GHRHP01286 108 aa11.92□□□□□ -0.5
CD9-207ENST00000538418 MLLT1Q03111 559 aaPredicted RBP11.92□□□□□ -0.5
CD9-207ENST00000538418 LONRF2Q1L5Z9 754 aa11.92□□□□□ -0.5
CD9-207ENST00000538418 THNSL2Q86YJ6 484 aa11.92□□□□□ -0.5
CD9-207ENST00000538418 NIM1KQ8IY84 436 aa11.92□□□□□ -0.5
CD9-207ENST00000538418 CHAC2Q8WUX2 184 aa11.92□□□□□ -0.5
CD9-207ENST00000538418 SGSM3Q96HU1 749 aa11.92□□□□□ -0.5
CD9-207ENST00000538418 CCDC136Q96JN2 1154 aa11.92□□□□□ -0.5
CD9-207ENST00000538418 SPATA9Q9BWV2 254 aa11.92□□□□□ -0.5
CD9-207ENST00000538418 FAM126AQ9BYI3 521 aaPredicted RBP11.92□□□□□ -0.5
CD9-207ENST00000538418 PRR12Q9ULL5 1215 aa11.92□□□□□ -0.5
CD9-207ENST00000538418 SLC12A7Q9Y666 1083 aa11.92□□□□□ -0.5
CD9-207ENST00000538418 SENP3-EIF4A1A0A087X0R7 540 aa11.91□□□□□ -0.5
CD9-207ENST00000538418 BNIP3LO60238 219 aa11.91□□□□□ -0.5
CD9-207ENST00000538418 ZNF252P-AS1Q0IIN9 211 aa11.91□□□□□ -0.5
CD9-207ENST00000538418 GORABQ5T7V8 394 aa11.91□□□□□ -0.5
CD9-207ENST00000538418 HGSNATQ68CP4 663 aa11.91□□□□□ -0.5
CD9-207ENST00000538418 RIPOR1Q6ZS17 1223 aa11.91□□□□□ -0.5
CD9-207ENST00000538418 NUCKS1Q9H1E3 243 aaKnown RBP11.91□□□□□ -0.5
CD9-207ENST00000538418 THRAP3Q9Y2W1 955 aaKnown RBP11.91□□□□□ -0.5
CD9-207ENST00000538418 FHAD1B1AJZ9 1412 aa11.9□□□□□ -0.5
CD9-207ENST00000538418 SMNDC1O75940 238 aaKnown RBP eCLIP11.9□□□□□ -0.5
CD9-207ENST00000538418 MYCLP1P12525 358 aaPredicted RBP11.9□□□□□ -0.5
CD9-207ENST00000538418 POU3F3P20264 500 aaPredicted RBP11.9□□□□□ -0.5
CD9-207ENST00000538418 STAT3P40763 770 aa11.9□□□□□ -0.5
CD9-207ENST00000538418 TBX4P57082 545 aa11.9□□□□□ -0.5
CD9-207ENST00000538418 NEUROD1Q13562 356 aa11.9□□□□□ -0.5
CD9-207ENST00000538418 BRDTQ58F21 947 aaPredicted RBP11.9□□□□□ -0.5
CD9-207ENST00000538418 CEP135Q66GS9 1140 aa11.9□□□□□ -0.5
CD9-207ENST00000538418 TRIM67Q6ZTA4 783 aa11.9□□□□□ -0.5
CD9-207ENST00000538418 EXOC8Q8IYI6 725 aa11.9□□□□□ -0.5
CD9-207ENST00000538418 TAB3Q8N5C8 712 aaPredicted RBP11.9□□□□□ -0.5
CD9-207ENST00000538418 TMEM40Q8WWA1 233 aa11.9□□□□□ -0.5
CD9-207ENST00000538418 SLC26A8Q96RN1 970 aa11.9□□□□□ -0.5
CD9-207ENST00000538418 NDFIP2Q9NV92 336 aa11.9□□□□□ -0.5
CD9-207ENST00000538418 GEMIN8Q9NWZ8 242 aaKnown RBP11.9□□□□□ -0.5
CD9-207ENST00000538418 DNMT3LQ9UJW3 386 aa11.9□□□□□ -0.5
CD9-207ENST00000538418 GRIN2AQ12879 1464 aa11.89□□□□□ -0.51
CD9-207ENST00000538418 NUP160Q12769 1436 aa11.89□□□□□ -0.51
CD9-207ENST00000538418 NCAPHQ15003 741 aa11.89□□□□□ -0.51
CD9-207ENST00000538418 ZC3H12BQ5HYM0 836 aaKnown RBP11.89□□□□□ -0.51
CD9-207ENST00000538418 VHLLQ6RSH7 139 aa11.89□□□□□ -0.51
CD9-207ENST00000538418 ADAMTSL4Q6UY14 1074 aa11.89□□□□□ -0.51
CD9-207ENST00000538418 VN1R5Q7Z5H4 357 aa11.89□□□□□ -0.51
CD9-207ENST00000538418 CCAR1Q8IX12 1150 aaKnown RBP11.89□□□□□ -0.51
CD9-207ENST00000538418 CCDC146Q8IYE0 955 aa11.89□□□□□ -0.51
CD9-207ENST00000538418 CAAP1Q9H8G2 361 aa11.89□□□□□ -0.51
CD9-207ENST00000538418 TCEAL9Q9UHQ7 104 aa11.89□□□□□ -0.51
CD9-207ENST00000538418 SOX13Q9UN79 622 aa11.89□□□□□ -0.51
CD9-207ENST00000538418 EID1Q9Y6B2 187 aa11.89□□□□□ -0.51
CD9-207ENST00000538418 PRR36Q9H6K5 1346 aa11.88□□□□□ -0.51
CD9-207ENST00000538418 CD33P20138 364 aa11.88□□□□□ -0.51
CD9-207ENST00000538418 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.88□□□□□ -0.51
CD9-207ENST00000538418 MPRIPQ6WCQ1 1025 aa11.88□□□□□ -0.51
CD9-207ENST00000538418 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.88□□□□□ -0.51
CD9-207ENST00000538418 DDX42Q86XP3 938 aaKnown RBP eCLIP11.88□□□□□ -0.51
CD9-207ENST00000538418 ZBTB38Q8NAP3 1195 aaPredicted RBP11.88□□□□□ -0.51
CD9-207ENST00000538418 ABCA5Q8WWZ7 1642 aa11.88□□□□□ -0.51
CD9-207ENST00000538418 CCDC163A0A0D9SF12 145 aa11.87□□□□□ -0.51
CD9-207ENST00000538418 IRS4O14654 1257 aaPredicted RBP11.87□□□□□ -0.51
CD9-207ENST00000538418 ADCY3O60266 1144 aa11.87□□□□□ -0.51
CD9-207ENST00000538418 PCSK7Q16549 785 aa11.87□□□□□ -0.51
CD9-207ENST00000538418 PERM1Q5SV97 790 aa11.87□□□□□ -0.51
CD9-207ENST00000538418 PDZD3Q86UT5 571 aa11.87□□□□□ -0.51
CD9-207ENST00000538418 LRRC47Q8N1G4 583 aaKnown RBP11.87□□□□□ -0.51
CD9-207ENST00000538418 TRERF1Q96PN7 1200 aa11.87□□□□□ -0.51
CD9-207ENST00000538418 A0A087X0B3 334 aa11.86□□□□□ -0.51
CD9-207ENST00000538418 H7C1W4 665 aa11.86□□□□□ -0.51
CD9-207ENST00000538418 PRC1O43663 620 aa11.86□□□□□ -0.51
CD9-207ENST00000538418 HTR3BO95264 441 aa11.86□□□□□ -0.51
CD9-207ENST00000538418 BMP1P13497 986 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms