RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 PPARAQ07869 468 aa16.3■□□□□ 0.2
LIMK1-208ENST00000538333 KRT40Q6A162 431 aa16.3■□□□□ 0.2
LIMK1-208ENST00000538333 DNAJC25Q9H1X3 360 aa16.3■□□□□ 0.2
LIMK1-208ENST00000538333 RAI14Q9P0K7 980 aa16.3■□□□□ 0.2
LIMK1-208ENST00000538333 ANAPC4Q9UJX5 808 aa16.3■□□□□ 0.2
LIMK1-208ENST00000538333 MAGEB6P1A0A0J9YX57 407 aa16.3■□□□□ 0.2
LIMK1-208ENST00000538333 KINO60870 393 aaKnown RBP16.3■□□□□ 0.2
LIMK1-208ENST00000538333 IARSP41252 1262 aaKnown RBP16.3■□□□□ 0.2
LIMK1-208ENST00000538333 ZNF165P49910 485 aa16.3■□□□□ 0.2
LIMK1-208ENST00000538333 RPS8P62241 208 aaKnown RBP16.3■□□□□ 0.2
LIMK1-208ENST00000538333 STK38Q15208 465 aa16.3■□□□□ 0.2
LIMK1-208ENST00000538333 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.3■□□□□ 0.2
LIMK1-208ENST00000538333 VPS37DQ86XT2 251 aa16.3■□□□□ 0.2
LIMK1-208ENST00000538333 MPNDQ8N594 471 aa16.3■□□□□ 0.2
LIMK1-208ENST00000538333 SDR42E1Q8WUS8 393 aa16.3■□□□□ 0.2
LIMK1-208ENST00000538333 NLRP3Q96P20 1036 aa16.3■□□□□ 0.2
LIMK1-208ENST00000538333 CCDC69A6NI79 296 aa16.29■□□□□ 0.2
LIMK1-208ENST00000538333 SPTLC2O15270 562 aa16.29■□□□□ 0.2
LIMK1-208ENST00000538333 KLRK1P26718 216 aa16.29■□□□□ 0.2
LIMK1-208ENST00000538333 ANO1Q5XXA6 986 aa16.29■□□□□ 0.2
LIMK1-208ENST00000538333 NBPF5PQ86XG9 351 aaPredicted RBP16.29■□□□□ 0.2
LIMK1-208ENST00000538333 RNF41Q9H4P4 317 aaPredicted RBP16.29■□□□□ 0.2
LIMK1-208ENST00000538333 CCNL1Q9UK58 526 aaPredicted RBP16.29■□□□□ 0.2
LIMK1-208ENST00000538333 USP21Q9UK80 565 aa16.29■□□□□ 0.2
LIMK1-208ENST00000538333 MYH2Q9UKX2 1941 aa16.29■□□□□ 0.2
LIMK1-208ENST00000538333 TNRC6CQ9HCJ0 1690 aaKnown RBP16.29■□□□□ 0.2
LIMK1-208ENST00000538333 PDS5AQ29RF7 1337 aaKnown RBP16.29■□□□□ 0.2
LIMK1-208ENST00000538333 SEMA3EO15041 775 aa16.28■□□□□ 0.2
LIMK1-208ENST00000538333 ZPR1O75312 459 aa16.28■□□□□ 0.2
LIMK1-208ENST00000538333 IFNAR1P17181 557 aa16.28■□□□□ 0.2
LIMK1-208ENST00000538333 RRP12Q5JTH9 1297 aaKnown RBP16.28■□□□□ 0.2
LIMK1-208ENST00000538333 SYNE3Q6ZMZ3 975 aa16.28■□□□□ 0.2
LIMK1-208ENST00000538333 ANO8Q9HCE9 1232 aaPredicted RBP16.28■□□□□ 0.2
LIMK1-208ENST00000538333 DUOX1Q9NRD9 1551 aa16.28■□□□□ 0.2
LIMK1-208ENST00000538333 FMNL1O95466 1100 aaPredicted RBP16.28■□□□□ 0.2
LIMK1-208ENST00000538333 U2AF2P26368 475 aaKnown RBP eCLIP16.28■□□□□ 0.2
LIMK1-208ENST00000538333 SART3Q15020 963 aaKnown RBP16.28■□□□□ 0.2
LIMK1-208ENST00000538333 AXDND1Q5T1B0 1012 aaPredicted RBP16.28■□□□□ 0.2
LIMK1-208ENST00000538333 FAM182BQ5T319 152 aa16.28■□□□□ 0.2
LIMK1-208ENST00000538333 ARHGEF1Q92888 912 aaKnown RBP16.28■□□□□ 0.2
LIMK1-208ENST00000538333 ZNF830Q96NB3 372 aaPredicted RBP16.28■□□□□ 0.2
LIMK1-208ENST00000538333 ZKSCAN3Q9BRR0 538 aa16.28■□□□□ 0.2
LIMK1-208ENST00000538333 RTCBQ9Y3I0 505 aaKnown RBP16.28■□□□□ 0.2
LIMK1-208ENST00000538333 A0A1B0GVL5 298 aa16.27■□□□□ 0.2
LIMK1-208ENST00000538333 UBE2Q2LH0YL09 131 aa16.27■□□□□ 0.2
LIMK1-208ENST00000538333 TM4SF1P30408 202 aa16.27■□□□□ 0.2
LIMK1-208ENST00000538333 NDUFA8P51970 172 aa16.27■□□□□ 0.2
LIMK1-208ENST00000538333 RCAN1P53805 252 aa16.27■□□□□ 0.2
LIMK1-208ENST00000538333 WTAPQ15007 396 aa16.27■□□□□ 0.2
LIMK1-208ENST00000538333 IQCB1Q15051 598 aa16.27■□□□□ 0.2
LIMK1-208ENST00000538333 TTC12Q9H892 705 aaPredicted RBP16.27■□□□□ 0.2
LIMK1-208ENST00000538333 SPATA31A6Q5VVP1 1343 aa16.27■□□□□ 0.19
LIMK1-208ENST00000538333 SMIM22K7EJ46 135 aa16.27■□□□□ 0.19
LIMK1-208ENST00000538333 KIAA2012Q0VF49 1180 aa16.27■□□□□ 0.19
LIMK1-208ENST00000538333 SLC39A14Q15043 492 aa16.27■□□□□ 0.19
LIMK1-208ENST00000538333 SF3A1Q15459 793 aaKnown RBP16.27■□□□□ 0.19
LIMK1-208ENST00000538333 STX1AQ16623 288 aa16.27■□□□□ 0.19
LIMK1-208ENST00000538333 TPTE2Q6XPS3 522 aa16.27■□□□□ 0.19
LIMK1-208ENST00000538333 C11orf57Q6ZUT1 292 aaPredicted RBP16.27■□□□□ 0.19
LIMK1-208ENST00000538333 TMTC2Q8N394 836 aa16.27■□□□□ 0.19
LIMK1-208ENST00000538333 TOMM22Q9NS69 142 aa16.27■□□□□ 0.19
LIMK1-208ENST00000538333 MAST2Q6P0Q8 1798 aa16.27■□□□□ 0.19
LIMK1-208ENST00000538333 DYNLL1P63167 89 aaKnown RBP16.26■□□□□ 0.19
LIMK1-208ENST00000538333 SSRP1Q08945 709 aaKnown RBP16.26■□□□□ 0.19
LIMK1-208ENST00000538333 SEC23AQ15436 765 aa16.26■□□□□ 0.19
LIMK1-208ENST00000538333 BRIP1Q9BX63 1249 aa16.26■□□□□ 0.19
LIMK1-208ENST00000538333 SLC26A6Q9BXS9 759 aa16.26■□□□□ 0.19
LIMK1-208ENST00000538333 DLEC1Q9Y238 1755 aa16.26■□□□□ 0.19
LIMK1-208ENST00000538333 IRS2Q9Y4H2 1338 aa16.26■□□□□ 0.19
LIMK1-208ENST00000538333 CCDC88AQ3V6T2 1871 aa16.26■□□□□ 0.19
LIMK1-208ENST00000538333 MINDY4BA8MYZ0 360 aa16.26■□□□□ 0.19
LIMK1-208ENST00000538333 RTN1Q16799 776 aa16.26■□□□□ 0.19
LIMK1-208ENST00000538333 NBPF11Q86T75 865 aa16.26■□□□□ 0.19
LIMK1-208ENST00000538333 PLA2G4DQ86XP0 818 aa16.26■□□□□ 0.19
LIMK1-208ENST00000538333 STK11IPQ8N1F8 1099 aa16.26■□□□□ 0.19
LIMK1-208ENST00000538333 CCDC24Q8N4L8 307 aa16.26■□□□□ 0.19
LIMK1-208ENST00000538333 NSUN4Q96CB9 384 aaKnown RBP16.26■□□□□ 0.19
LIMK1-208ENST00000538333 ANKRD2Q9GZV1 360 aa16.26■□□□□ 0.19
LIMK1-208ENST00000538333 MYH6P13533 1939 aa16.25■□□□□ 0.19
LIMK1-208ENST00000538333 ERICH2A1L162 156 aa16.25■□□□□ 0.19
LIMK1-208ENST00000538333 ZBTB22O15209 634 aa16.25■□□□□ 0.19
LIMK1-208ENST00000538333 WDHD1O75717 1129 aaPredicted RBP16.25■□□□□ 0.19
LIMK1-208ENST00000538333 PTPAQ15257 358 aa16.25■□□□□ 0.19
LIMK1-208ENST00000538333 PIBF1Q8WXW3 757 aa16.25■□□□□ 0.19
LIMK1-208ENST00000538333 MAP3K14Q99558 947 aa16.25■□□□□ 0.19
LIMK1-208ENST00000538333 LAMB1P07942 1786 aa16.25■□□□□ 0.19
LIMK1-208ENST00000538333 FGRP09769 529 aa16.24■□□□□ 0.19
LIMK1-208ENST00000538333 CMA1P23946 247 aa16.24■□□□□ 0.19
LIMK1-208ENST00000538333 HIBADHP31937 336 aaKnown RBP16.24■□□□□ 0.19
LIMK1-208ENST00000538333 GUCY1A2P33402 732 aa16.24■□□□□ 0.19
LIMK1-208ENST00000538333 ZNF654Q8IZM8 581 aa16.24■□□□□ 0.19
LIMK1-208ENST00000538333 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.24■□□□□ 0.19
LIMK1-208ENST00000538333 KCNF1Q9H3M0 494 aa16.24■□□□□ 0.19
LIMK1-208ENST00000538333 KIAA1551Q9HCM1 1747 aa16.24■□□□□ 0.19
LIMK1-208ENST00000538333 MROH7-TTC4A0A0A0MT08 1334 aa16.24■□□□□ 0.19
LIMK1-208ENST00000538333 PPP6R2O75170 966 aa16.24■□□□□ 0.19
LIMK1-208ENST00000538333 TRIM29Q14134 588 aa16.24■□□□□ 0.19
LIMK1-208ENST00000538333 WASF1Q92558 559 aa16.24■□□□□ 0.19
LIMK1-208ENST00000538333 ESR2Q92731 530 aa16.24■□□□□ 0.19
LIMK1-208ENST00000538333 TFCP2L1Q9NZI6 479 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms