RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 METAP2P50579 478 aaKnown RBP eCLIP13.95□□□□□ -0.18
CPSF7-218ENST00000537641 FKBP4Q02790 459 aaKnown RBP eCLIP13.95□□□□□ -0.18
CPSF7-218ENST00000537641 GORABQ5T7V8 394 aa13.95□□□□□ -0.18
CPSF7-218ENST00000537641 CCDC102BQ68D86 513 aa13.95□□□□□ -0.18
CPSF7-218ENST00000537641 GIGYF2Q6Y7W6 1299 aaKnown RBP13.95□□□□□ -0.18
CPSF7-218ENST00000537641 KRBA2Q6ZNG9 492 aa13.95□□□□□ -0.18
CPSF7-218ENST00000537641 GPR161Q8N6U8 529 aaKnown RBP13.95□□□□□ -0.18
CPSF7-218ENST00000537641 ZBTB38Q8NAP3 1195 aaPredicted RBP13.95□□□□□ -0.18
CPSF7-218ENST00000537641 TMEM87BQ96K49 555 aa13.95□□□□□ -0.18
CPSF7-218ENST00000537641 MAP3K14Q99558 947 aa13.95□□□□□ -0.18
CPSF7-218ENST00000537641 CARD6Q9BX69 1037 aa13.95□□□□□ -0.18
CPSF7-218ENST00000537641 UBXN6Q9BZV1 441 aa13.95□□□□□ -0.18
CPSF7-218ENST00000537641 ST7Q9NRC1 585 aa13.95□□□□□ -0.18
CPSF7-218ENST00000537641 PPP2R2CQ9Y2T4 447 aa13.95□□□□□ -0.18
CPSF7-218ENST00000537641 ZNF330Q9Y3S2 320 aaPredicted RBP13.95□□□□□ -0.18
CPSF7-218ENST00000537641 TIAM2Q8IVF5 1701 aa13.95□□□□□ -0.18
CPSF7-218ENST00000537641 CHD4Q14839 1912 aa13.95□□□□□ -0.18
CPSF7-218ENST00000537641 GPAA1O43292 621 aa13.95□□□□□ -0.18
CPSF7-218ENST00000537641 STX10O60499 249 aa13.95□□□□□ -0.18
CPSF7-218ENST00000537641 NID2Q14112 1375 aa13.95□□□□□ -0.18
CPSF7-218ENST00000537641 METTL16Q86W50 562 aaKnown RBP13.95□□□□□ -0.18
CPSF7-218ENST00000537641 XAGE2Q96GT9 111 aa13.95□□□□□ -0.18
CPSF7-218ENST00000537641 UTP14AQ9BVJ6 771 aaKnown RBP13.95□□□□□ -0.18
CPSF7-218ENST00000537641 CDHR2Q9BYE9 1310 aa13.95□□□□□ -0.18
CPSF7-218ENST00000537641 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.95□□□□□ -0.184e-7■■■□□ 16.7
CPSF7-218ENST00000537641 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.95□□□□□ -0.18
CPSF7-218ENST00000537641 AKAP11Q9UKA4 1901 aa13.95□□□□□ -0.18
CPSF7-218ENST00000537641 CSF1RP07333 972 aa13.94□□□□□ -0.18
CPSF7-218ENST00000537641 CASQ1P31415 396 aa13.94□□□□□ -0.18
CPSF7-218ENST00000537641 PNOCQ13519 176 aa13.94□□□□□ -0.18
CPSF7-218ENST00000537641 GNL2Q13823 731 aaKnown RBP13.94□□□□□ -0.18
CPSF7-218ENST00000537641 TRIM29Q14134 588 aa13.94□□□□□ -0.18
CPSF7-218ENST00000537641 HSP90AB3PQ58FF7 597 aa13.94□□□□□ -0.18
CPSF7-218ENST00000537641 CNNM3Q8NE01 707 aa13.94□□□□□ -0.18
CPSF7-218ENST00000537641 PUS3Q9BZE2 481 aaKnown RBP13.94□□□□□ -0.18
CPSF7-218ENST00000537641 GJB4Q9NTQ9 266 aa13.94□□□□□ -0.18
CPSF7-218ENST00000537641 RIC1Q4ADV7 1423 aa13.93□□□□□ -0.18
CPSF7-218ENST00000537641 TMEM232C9JQI7 657 aa13.93□□□□□ -0.18
CPSF7-218ENST00000537641 CYP19A1P11511 503 aaPredicted RBP13.93□□□□□ -0.18
CPSF7-218ENST00000537641 MAP3K9P80192 1104 aa13.93□□□□□ -0.18
CPSF7-218ENST00000537641 JAKMIP3Q5VZ66 844 aa13.93□□□□□ -0.18
CPSF7-218ENST00000537641 TRIML1Q8N9V2 468 aa13.93□□□□□ -0.18
CPSF7-218ENST00000537641 SYTL4Q96C24 671 aaPredicted RBP13.93□□□□□ -0.18
CPSF7-218ENST00000537641 BAG1Q99933 345 aaPredicted RBP13.93□□□□□ -0.18
CPSF7-218ENST00000537641 PUS7LQ9H0K6 701 aaKnown RBP13.93□□□□□ -0.18
CPSF7-218ENST00000537641 MRFAP1Q9Y605 127 aa13.93□□□□□ -0.18
CPSF7-218ENST00000537641 NRAPQ86VF7 1730 aa13.93□□□□□ -0.18
CPSF7-218ENST00000537641 ARAP2Q8WZ64 1704 aa13.93□□□□□ -0.18
CPSF7-218ENST00000537641 EXOC5O00471 708 aa13.93□□□□□ -0.18
CPSF7-218ENST00000537641 FANCGO15287 622 aa13.93□□□□□ -0.18
CPSF7-218ENST00000537641 ADORA1P30542 326 aa13.93□□□□□ -0.18
CPSF7-218ENST00000537641 ZAP70P43403 619 aa13.93□□□□□ -0.18
CPSF7-218ENST00000537641 PPP2R3AQ06190 1150 aa13.93□□□□□ -0.18
CPSF7-218ENST00000537641 ISM2Q6H9L7 571 aa13.93□□□□□ -0.18
CPSF7-218ENST00000537641 APOA5Q6Q788 366 aa13.93□□□□□ -0.18
CPSF7-218ENST00000537641 RSRC2Q7L4I2 434 aaKnown RBP13.93□□□□□ -0.18
CPSF7-218ENST00000537641 RAB11FIP4Q86YS3 637 aa13.93□□□□□ -0.18
CPSF7-218ENST00000537641 TXLNBQ8N3L3 684 aa13.93□□□□□ -0.18
CPSF7-218ENST00000537641 ENOX1Q8TC92 643 aaKnown RBP13.93□□□□□ -0.18
CPSF7-218ENST00000537641 FAM89AQ96GI7 184 aa13.93□□□□□ -0.18
CPSF7-218ENST00000537641 ZNF512BQ96KM6 892 aaPredicted RBP13.93□□□□□ -0.18
CPSF7-218ENST00000537641 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.93□□□□□ -0.18
CPSF7-218ENST00000537641 INTS13Q9NVM9 706 aa13.93□□□□□ -0.18
CPSF7-218ENST00000537641 FANCLQ9NW38 375 aa13.93□□□□□ -0.18
CPSF7-218ENST00000537641 PODXL2Q9NZ53 605 aa13.93□□□□□ -0.18
CPSF7-218ENST00000537641 KCNH3Q9ULD8 1083 aa13.93□□□□□ -0.18
CPSF7-218ENST00000537641 ZNF18P17022 549 aa13.92□□□□□ -0.18
CPSF7-218ENST00000537641 ADD2P35612 726 aa13.92□□□□□ -0.18
CPSF7-218ENST00000537641 IFIT5Q13325 482 aaKnown RBP13.92□□□□□ -0.18
CPSF7-218ENST00000537641 NT5DC1Q5TFE4 455 aa13.92□□□□□ -0.18
CPSF7-218ENST00000537641 CC2D1AQ6P1N0 951 aaPredicted RBP13.92□□□□□ -0.18
CPSF7-218ENST00000537641 KRI1Q8N9T8 703 aaKnown RBP13.92□□□□□ -0.18
CPSF7-218ENST00000537641 MLKLQ8NB16 471 aa13.92□□□□□ -0.18
CPSF7-218ENST00000537641 WASF1Q92558 559 aa13.92□□□□□ -0.18
CPSF7-218ENST00000537641 RABGGTAQ92696 567 aa13.92□□□□□ -0.18
CPSF7-218ENST00000537641 GOLGA1Q92805 767 aa13.92□□□□□ -0.18
CPSF7-218ENST00000537641 PCDHA5Q9Y5H7 936 aa13.92□□□□□ -0.18
CPSF7-218ENST00000537641 ERICH4A6NGS2 130 aa13.91□□□□□ -0.18
CPSF7-218ENST00000537641 ZBTB43O43298 467 aa13.91□□□□□ -0.18
CPSF7-218ENST00000537641 IARSP41252 1262 aaKnown RBP13.91□□□□□ -0.18
CPSF7-218ENST00000537641 TTF1Q15361 905 aaPredicted RBP13.91□□□□□ -0.18
CPSF7-218ENST00000537641 NTRK3Q16288 839 aa13.91□□□□□ -0.18
CPSF7-218ENST00000537641 LONRF3Q496Y0 759 aa13.91□□□□□ -0.18
CPSF7-218ENST00000537641 TAF7LQ5H9L4 462 aa13.91□□□□□ -0.18
CPSF7-218ENST00000537641 CT47A1Q5JQC4 288 aaPredicted RBP13.91□□□□□ -0.18
CPSF7-218ENST00000537641 SPECC1LQ69YQ0 1117 aa13.91□□□□□ -0.18
CPSF7-218ENST00000537641 CYB5R4Q7L1T6 521 aa13.91□□□□□ -0.18
CPSF7-218ENST00000537641 SGMS1Q86VZ5 419 aa13.91□□□□□ -0.18
CPSF7-218ENST00000537641 NLRP10Q86W26 655 aa13.91□□□□□ -0.18
CPSF7-218ENST00000537641 KIFC2Q96AC6 838 aa13.91□□□□□ -0.18
CPSF7-218ENST00000537641 NBPF3Q9H094 633 aa13.91□□□□□ -0.18
CPSF7-218ENST00000537641 MAN1B1Q9UKM7 699 aa13.91□□□□□ -0.18
CPSF7-218ENST00000537641 CICQ96RK0 1608 aaPredicted RBP13.91□□□□□ -0.18
CPSF7-218ENST00000537641 GOLGA8AA7E2F4 631 aa13.9□□□□□ -0.18
CPSF7-218ENST00000537641 TBC1D8O95759 1140 aa13.9□□□□□ -0.18
CPSF7-218ENST00000537641 GNG11P61952 73 aa13.9□□□□□ -0.18
CPSF7-218ENST00000537641 MDM2Q00987 491 aaPredicted RBP13.9□□□□□ -0.18
CPSF7-218ENST00000537641 SCARF1Q14162 830 aa13.9□□□□□ -0.18
CPSF7-218ENST00000537641 TBC1D10CQ8IV04 446 aa13.9□□□□□ -0.18
CPSF7-218ENST00000537641 TC2NQ8N9U0 490 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms