RNA–Protein interactions for RNA: ENST00000537619.6

PTPRR-205, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 1,927 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-205ENST00000537619 MAGEB6P1A0A0J9YX57 407 aa10.85□□□□□ -0.67
PTPRR-205ENST00000537619 YEATS4O95619 227 aa10.85□□□□□ -0.67
PTPRR-205ENST00000537619 RPS8P62241 208 aaKnown RBP10.85□□□□□ -0.67
PTPRR-205ENST00000537619 PLCB2Q00722 1185 aa10.85□□□□□ -0.67
PTPRR-205ENST00000537619 AXDND1Q5T1B0 1012 aaPredicted RBP10.85□□□□□ -0.67
PTPRR-205ENST00000537619 NBPF5PQ86XG9 351 aaPredicted RBP10.85□□□□□ -0.67
PTPRR-205ENST00000537619 ERCC4Q92889 916 aaPredicted RBP10.85□□□□□ -0.67
PTPRR-205ENST00000537619 SETDB2Q96T68 719 aa10.85□□□□□ -0.67
PTPRR-205ENST00000537619 KRT23Q9C075 422 aa10.85□□□□□ -0.67
PTPRR-205ENST00000537619 CNNM2Q9H8M5 875 aa10.85□□□□□ -0.67
PTPRR-205ENST00000537619 TFCP2L1Q9NZI6 479 aa10.85□□□□□ -0.67
PTPRR-205ENST00000537619 DUOX1Q9NRD9 1551 aa10.85□□□□□ -0.67
PTPRR-205ENST00000537619 A0A1B0GVL5 298 aa10.84□□□□□ -0.67
PTPRR-205ENST00000537619 A0A1W2PQ27 194 aa10.84□□□□□ -0.67
PTPRR-205ENST00000537619 A0A1W2PQ64 194 aa10.84□□□□□ -0.67
PTPRR-205ENST00000537619 A0A1W2PQD8 194 aa10.84□□□□□ -0.67
PTPRR-205ENST00000537619 GTF2E1P29083 439 aaPredicted RBP10.84□□□□□ -0.67
PTPRR-205ENST00000537619 NDUFA8P51970 172 aa10.84□□□□□ -0.67
PTPRR-205ENST00000537619 IQCB1Q15051 598 aa10.84□□□□□ -0.67
PTPRR-205ENST00000537619 STK38Q15208 465 aa10.84□□□□□ -0.67
PTPRR-205ENST00000537619 ANO1Q5XXA6 986 aa10.84□□□□□ -0.67
PTPRR-205ENST00000537619 ADALQ6DHV7 355 aa10.84□□□□□ -0.67
PTPRR-205ENST00000537619 CCDC73Q6ZRK6 1079 aa10.84□□□□□ -0.67
PTPRR-205ENST00000537619 TXNRD3Q86VQ6 643 aa10.84□□□□□ -0.67
PTPRR-205ENST00000537619 VPS37DQ86XT2 251 aa10.84□□□□□ -0.67
PTPRR-205ENST00000537619 MRPS27Q92552 414 aaKnown RBP10.84□□□□□ -0.67
PTPRR-205ENST00000537619 NACAP1Q9BZK3 213 aa10.84□□□□□ -0.67
PTPRR-205ENST00000537619 NYXQ9GZU5 481 aa10.84□□□□□ -0.67
PTPRR-205ENST00000537619 KCNF1Q9H3M0 494 aa10.84□□□□□ -0.67
PTPRR-205ENST00000537619 ANAPC4Q9UJX5 808 aa10.84□□□□□ -0.67
PTPRR-205ENST00000537619 TAOK2Q9UL54 1235 aa10.84□□□□□ -0.67
PTPRR-205ENST00000537619 SPTLC2O15270 562 aa10.84□□□□□ -0.67
PTPRR-205ENST00000537619 WDHD1O75717 1129 aaPredicted RBP10.84□□□□□ -0.67
PTPRR-205ENST00000537619 CDKL5O76039 1030 aa10.84□□□□□ -0.67
PTPRR-205ENST00000537619 FMNL1O95466 1100 aaPredicted RBP10.84□□□□□ -0.67
PTPRR-205ENST00000537619 SEC23AQ15436 765 aa10.84□□□□□ -0.67
PTPRR-205ENST00000537619 SASS6Q6UVJ0 657 aa10.84□□□□□ -0.67
PTPRR-205ENST00000537619 NBPF11Q86T75 865 aa10.84□□□□□ -0.67
PTPRR-205ENST00000537619 RGS22Q8NE09 1264 aa10.84□□□□□ -0.67
PTPRR-205ENST00000537619 SHISA4Q96DD7 197 aa10.84□□□□□ -0.67
PTPRR-205ENST00000537619 NLRP3Q96P20 1036 aa10.84□□□□□ -0.67
PTPRR-205ENST00000537619 SLC26A6Q9BXS9 759 aa10.84□□□□□ -0.67
PTPRR-205ENST00000537619 TOMM22Q9NS69 142 aa10.84□□□□□ -0.67
PTPRR-205ENST00000537619 GNL3LQ9NVN8 582 aaKnown RBP10.84□□□□□ -0.67
PTPRR-205ENST00000537619 RTCBQ9Y3I0 505 aaKnown RBP10.84□□□□□ -0.67
PTPRR-205ENST00000537619 SLC12A7Q9Y666 1083 aa10.84□□□□□ -0.67
PTPRR-205ENST00000537619 STK36Q9NRP7 1315 aa10.83□□□□□ -0.67
PTPRR-205ENST00000537619 SBF2Q86WG5 1849 aa10.83□□□□□ -0.68
PTPRR-205ENST00000537619 CCDC69A6NI79 296 aa10.83□□□□□ -0.68
PTPRR-205ENST00000537619 MINDY4BA8MYZ0 360 aa10.83□□□□□ -0.68
PTPRR-205ENST00000537619 ZPR1O75312 459 aa10.83□□□□□ -0.68
PTPRR-205ENST00000537619 IFNAR1P17181 557 aa10.83□□□□□ -0.68
PTPRR-205ENST00000537619 IARSP41252 1262 aaKnown RBP10.83□□□□□ -0.68
PTPRR-205ENST00000537619 WTAPQ15007 396 aa10.83□□□□□ -0.68
PTPRR-205ENST00000537619 PTPAQ15257 358 aa10.83□□□□□ -0.68
PTPRR-205ENST00000537619 CAVIN4Q5BKX8 364 aa10.83□□□□□ -0.68
PTPRR-205ENST00000537619 C17orf53Q8N3J3 647 aaPredicted RBP10.83□□□□□ -0.68
PTPRR-205ENST00000537619 KCNG4Q8TDN1 519 aa10.83□□□□□ -0.68
PTPRR-205ENST00000537619 NSUN4Q96CB9 384 aaKnown RBP10.83□□□□□ -0.68
PTPRR-205ENST00000537619 LRRC4BQ9NT99 713 aa10.83□□□□□ -0.68
PTPRR-205ENST00000537619 BAZ2AQ9UIF9 1905 aaKnown RBP10.83□□□□□ -0.68
PTPRR-205ENST00000537619 KINO60870 393 aaKnown RBP10.82□□□□□ -0.68
PTPRR-205ENST00000537619 U2AF2P26368 475 aaKnown RBP eCLIP10.82□□□□□ -0.68
PTPRR-205ENST00000537619 MARCKSP29966 332 aaPredicted RBP10.82□□□□□ -0.68
PTPRR-205ENST00000537619 PRDX5P30044 214 aa10.82□□□□□ -0.68
PTPRR-205ENST00000537619 ZNF165P49910 485 aa10.82□□□□□ -0.68
PTPRR-205ENST00000537619 MECOMQ03112 1051 aa10.82□□□□□ -0.68
PTPRR-205ENST00000537619 CMTR1Q8N1G2 835 aaKnown RBP10.82□□□□□ -0.68
PTPRR-205ENST00000537619 SPC24Q8NBT2 197 aa10.82□□□□□ -0.68
PTPRR-205ENST00000537619 MAP3K14Q99558 947 aa10.82□□□□□ -0.68
PTPRR-205ENST00000537619 JAG2Q9Y219 1238 aa10.82□□□□□ -0.68
PTPRR-205ENST00000537619 CTAGE5O15320 804 aa10.82□□□□□ -0.68
PTPRR-205ENST00000537619 SSRP1Q08945 709 aaKnown RBP10.82□□□□□ -0.68
PTPRR-205ENST00000537619 CHAF1AQ13111 956 aaPredicted RBP10.82□□□□□ -0.68
PTPRR-205ENST00000537619 SLC39A14Q15043 492 aa10.82□□□□□ -0.68
PTPRR-205ENST00000537619 SF3A1Q15459 793 aaKnown RBP10.82□□□□□ -0.68
PTPRR-205ENST00000537619 STX1AQ16623 288 aa10.82□□□□□ -0.68
PTPRR-205ENST00000537619 RTN1Q16799 776 aa10.82□□□□□ -0.68
PTPRR-205ENST00000537619 CPLX2Q6PUV4 134 aaKnown RBP10.82□□□□□ -0.68
PTPRR-205ENST00000537619 PLA2G4DQ86XP0 818 aa10.82□□□□□ -0.68
PTPRR-205ENST00000537619 ZNF654Q8IZM8 581 aa10.82□□□□□ -0.68
PTPRR-205ENST00000537619 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.82□□□□□ -0.68
PTPRR-205ENST00000537619 BRIP1Q9BX63 1249 aa10.82□□□□□ -0.68
PTPRR-205ENST00000537619 PYCARDQ9ULZ3 195 aa10.82□□□□□ -0.68
PTPRR-205ENST00000537619 TNKSO95271 1327 aa10.82□□□□□ -0.68
PTPRR-205ENST00000537619 SPATA31A6Q5VVP1 1343 aa10.82□□□□□ -0.68
PTPRR-205ENST00000537619 PRDM1O75626 825 aa10.81□□□□□ -0.68
PTPRR-205ENST00000537619 PFKFB1P16118 471 aa10.81□□□□□ -0.68
PTPRR-205ENST00000537619 HIBADHP31937 336 aaKnown RBP10.81□□□□□ -0.68
PTPRR-205ENST00000537619 ZNF75DP51815 510 aa10.81□□□□□ -0.68
PTPRR-205ENST00000537619 NFIXQ14938 502 aa10.81□□□□□ -0.68
PTPRR-205ENST00000537619 PDS5AQ29RF7 1337 aaKnown RBP10.81□□□□□ -0.68
PTPRR-205ENST00000537619 MAST2Q6P0Q8 1798 aa10.81□□□□□ -0.68
PTPRR-205ENST00000537619 CTR9Q6PD62 1173 aa10.81□□□□□ -0.68
PTPRR-205ENST00000537619 FAM196AQ6ZSG2 479 aa10.81□□□□□ -0.68
PTPRR-205ENST00000537619 DHX40Q8IX18 779 aaKnown RBP10.81□□□□□ -0.68
PTPRR-205ENST00000537619 GJD4Q96KN9 370 aaPredicted RBP10.81□□□□□ -0.68
PTPRR-205ENST00000537619 MTA3Q9BTC8 594 aa10.81□□□□□ -0.68
PTPRR-205ENST00000537619 RNF41Q9H4P4 317 aaPredicted RBP10.81□□□□□ -0.68
PTPRR-205ENST00000537619 MYH13Q9UKX3 1938 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms