RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 NLRP6P59044 892 aa6.08□□□□□ -1.44
PTPRD-213ENST00000537002 SF3A3Q12874 501 aaKnown RBP eCLIP6.08□□□□□ -1.44
PTPRD-213ENST00000537002 CREB3L3Q68CJ9 461 aa6.08□□□□□ -1.44
PTPRD-213ENST00000537002 ANKS4BQ8N8V4 417 aa6.08□□□□□ -1.44
PTPRD-213ENST00000537002 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.08□□□□□ -1.44
PTPRD-213ENST00000537002 VWDEQ8N2E2 1590 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 AKR1B15C9JRZ8 316 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-213ENST00000537002 GOLGA8KD6RF30 607 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 SSRP1Q08945 709 aaKnown RBP6.07□□□□□ -1.44
PTPRD-213ENST00000537002 TRIM14Q14142 442 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 NME9Q86XW9 330 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 AKR1B10O60218 316 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 MRPL12P52815 198 aaKnown RBP6.07□□□□□ -1.44
PTPRD-213ENST00000537002 FBF1Q8TES7 1133 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 NUCKS1Q9H1E3 243 aaKnown RBP6.07□□□□□ -1.44
PTPRD-213ENST00000537002 FAM204AQ9H8W3 233 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 AMOTL2Q9Y2J4 779 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 FAN1Q9Y2M0 1017 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 CCT5P48643 541 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 PRPF4BQ13523 1007 aaKnown RBP6.07□□□□□ -1.44
PTPRD-213ENST00000537002 CEP85LQ5SZL2 805 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 E4F1Q66K89 784 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-213ENST00000537002 EGFL6Q8IUX8 553 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 MLH3Q9UHC1 1453 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 KLF18A0A0U1RQI7 1052 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 TRIM66O15016 1216 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 MTX1Q13505 466 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 PNMA8AQ86V59 439 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-213ENST00000537002 IQCDQ96DY2 449 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 DESI2Q9BSY9 194 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 C19orf44Q9H6X5 657 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 CACNA1FO60840 1977 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 USP42Q9H9J4 1324 aaKnown RBP6.07□□□□□ -1.44
PTPRD-213ENST00000537002 TRIM21P19474 475 aaKnown RBP6.07□□□□□ -1.44
PTPRD-213ENST00000537002 ELF1P32519 619 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 CYLC1P35663 651 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-213ENST00000537002 TSGA10IPQ3SY00 556 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.07□□□□□ -1.44
PTPRD-213ENST00000537002 PARD6BQ9BYG5 372 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 BICC1Q9H694 974 aaKnown RBP6.07□□□□□ -1.44
PTPRD-213ENST00000537002 TBX22Q9Y458 520 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 GLI2P10070 1586 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 UGGT1Q9NYU2 1555 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 TACC1O75410 805 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 SASH1O94885 1247 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 LUC7L3O95232 432 aaKnown RBP6.07□□□□□ -1.44
PTPRD-213ENST00000537002 IDEP14735 1019 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 SPAG1Q07617 926 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 GOLGA8FQ08AF8 430 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 GOLGA8DPQ0D2H9 430 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 KRT24Q2M2I5 525 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 KANK3Q6NY19 840 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 SND1Q7KZF4 910 aaKnown RBP eCLIP6.07□□□□□ -1.44
PTPRD-213ENST00000537002 CNGA4Q8IV77 575 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 PARP3Q9Y6F1 533 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 QRICH2Q9H0J4 1663 aa6.07□□□□□ -1.44
PTPRD-213ENST00000537002 IDI1Q13907 227 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 CCDC122Q5T0U0 273 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 LRRC59Q96AG4 307 aaKnown RBP6.06□□□□□ -1.44
PTPRD-213ENST00000537002 SIRT1Q96EB6 747 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 TRIM47Q96LD4 638 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 JPH2Q9BR39 696 aaPredicted RBP6.06□□□□□ -1.44
PTPRD-213ENST00000537002 SAMD15Q9P1V8 674 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 LRRC7Q96NW7 1537 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 CNPY4Q8N129 248 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 CCDC85AQ96PX6 553 aaPredicted RBP6.06□□□□□ -1.44
PTPRD-213ENST00000537002 NACAP1Q9BZK3 213 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 PPP2R2CQ9Y2T4 447 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 SLC12A7Q9Y666 1083 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 MAP3K15Q6ZN16 1313 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 PRPHP41219 470 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 CCDC144BQ3MJ40 725 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 ADALQ6DHV7 355 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 PACS2Q86VP3 889 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 MICU3Q86XE3 530 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 ATP7BP35670 1465 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 SALL3Q9BXA9 1300 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 ADGRB3O60242 1522 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 IDH1O75874 414 aaKnown RBP6.06□□□□□ -1.44
PTPRD-213ENST00000537002 FSBPO95073 299 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 TRAF1Q13077 416 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 IGSF22Q8N9C0 903 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 TRIML1Q8N9V2 468 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 DHX58Q96C10 678 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 HOOK2Q96ED9 719 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 SLC26A6Q9BXS9 759 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 BAIAP2L1Q9UHR4 511 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 KRT86O43790 486 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 IARSP41252 1262 aaKnown RBP6.06□□□□□ -1.44
PTPRD-213ENST00000537002 ARHGEF25Q86VW2 580 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 ARMC2Q8NEN0 867 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 GSTTP1A0A1W2PQM5 241 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 CCDC160A6NGH7 325 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 E7EVH7 732 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 METAP2P50579 478 aaKnown RBP eCLIP6.06□□□□□ -1.44
PTPRD-213ENST00000537002 KRT83P78385 493 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 UBXN1Q04323 297 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 CHST3Q7LGC8 479 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 KIAA1468Q9P260 1216 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 L1RE1Q9UN81 338 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms