RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 TEX35Q5T0J7 233 aa9.04□□□□□ -0.96
CPSF7-216ENST00000536548 NAA16Q6N069 864 aaPredicted RBP9.04□□□□□ -0.96
CPSF7-216ENST00000536548 FILIP1Q7Z7B0 1213 aa9.04□□□□□ -0.96
CPSF7-216ENST00000536548 CEP57L1Q8IYX8 460 aa9.04□□□□□ -0.96
CPSF7-216ENST00000536548 ZC3H15Q8WU90 426 aaKnown RBP9.04□□□□□ -0.96
CPSF7-216ENST00000536548 OTUD5Q96G74 571 aa9.04□□□□□ -0.96
CPSF7-216ENST00000536548 LARP6Q9BRS8 491 aaKnown RBP9.04□□□□□ -0.96
CPSF7-216ENST00000536548 LLPHQ9BRT6 129 aaKnown RBP9.04□□□□□ -0.96
CPSF7-216ENST00000536548 GBA2Q9HCG7 927 aaPredicted RBP9.04□□□□□ -0.96
CPSF7-216ENST00000536548 NRBP1Q9UHY1 535 aa9.04□□□□□ -0.96
CPSF7-216ENST00000536548 CHMP3Q9Y3E7 222 aa9.04□□□□□ -0.96
CPSF7-216ENST00000536548 MUC3AQ02505 3323 aa9.04□□□□□ -0.96
CPSF7-216ENST00000536548 RFX7Q2KHR2 1363 aa9.03□□□□□ -0.96
CPSF7-216ENST00000536548 CACNA1FO60840 1977 aa9.03□□□□□ -0.96
CPSF7-216ENST00000536548 ADM5C9JUS6 153 aa9.03□□□□□ -0.96
CPSF7-216ENST00000536548 ATP8B1O43520 1251 aa9.03□□□□□ -0.96
CPSF7-216ENST00000536548 KINO60870 393 aaKnown RBP9.03□□□□□ -0.96
CPSF7-216ENST00000536548 PIP4K2AP48426 406 aaPredicted RBP9.03□□□□□ -0.96
CPSF7-216ENST00000536548 SLC20A2Q08357 652 aa9.03□□□□□ -0.96
CPSF7-216ENST00000536548 SNW1Q13573 536 aaKnown RBP9.03□□□□□ -0.96
CPSF7-216ENST00000536548 ZRSR1Q15695 479 aaKnown RBP9.03□□□□□ -0.96
CPSF7-216ENST00000536548 AOC3Q16853 763 aa9.03□□□□□ -0.96
CPSF7-216ENST00000536548 BEND3Q5T5X7 828 aa9.03□□□□□ -0.96
CPSF7-216ENST00000536548 FERMT3Q86UX7 667 aa9.03□□□□□ -0.96
CPSF7-216ENST00000536548 NIM1KQ8IY84 436 aa9.03□□□□□ -0.96
CPSF7-216ENST00000536548 CCAR2Q8N163 923 aaKnown RBP9.03□□□□□ -0.96
CPSF7-216ENST00000536548 C2orf69Q8N8R5 385 aa9.03□□□□□ -0.96
CPSF7-216ENST00000536548 SRRTQ9BXP5 876 aaKnown RBP9.03□□□□□ -0.96
CPSF7-216ENST00000536548 ZNF215Q9UL58 517 aaPredicted RBP9.03□□□□□ -0.96
CPSF7-216ENST00000536548 RBBP6Q7Z6E9 1792 aaKnown RBP9.02□□□□□ -0.97
CPSF7-216ENST00000536548 H0YGN5 161 aa9.02□□□□□ -0.97
CPSF7-216ENST00000536548 PPIP5K2O43314 1243 aa9.02□□□□□ -0.97
CPSF7-216ENST00000536548 NR1I2O75469 434 aa9.02□□□□□ -0.97
CPSF7-216ENST00000536548 EGFRP00533 1210 aa9.02□□□□□ -0.97
CPSF7-216ENST00000536548 IL6STP40189 918 aaPredicted RBP9.02□□□□□ -0.97
CPSF7-216ENST00000536548 CCZ1BP86790 482 aa9.02□□□□□ -0.97
CPSF7-216ENST00000536548 CCZ1P86791 482 aaPredicted RBP9.02□□□□□ -0.97
CPSF7-216ENST00000536548 NMIQ13287 307 aaPredicted RBP9.02□□□□□ -0.97
CPSF7-216ENST00000536548 CCDC144BQ3MJ40 725 aa9.02□□□□□ -0.97
CPSF7-216ENST00000536548 KMT5BQ4FZB7 885 aa9.02□□□□□ -0.97
CPSF7-216ENST00000536548 CCDC144CPQ8IYA2 1237 aa9.02□□□□□ -0.97
CPSF7-216ENST00000536548 BBXQ8WY36 941 aaPredicted RBP9.02□□□□□ -0.97
CPSF7-216ENST00000536548 NECTIN2Q92692 538 aa9.02□□□□□ -0.97
CPSF7-216ENST00000536548 GTF3C6Q969F1 213 aa9.02□□□□□ -0.97
CPSF7-216ENST00000536548 DNAJC2Q99543 621 aaKnown RBP9.02□□□□□ -0.97
CPSF7-216ENST00000536548 NOL10Q9BSC4 688 aaKnown RBP9.02□□□□□ -0.97
CPSF7-216ENST00000536548 OSBPL5Q9H0X9 879 aaPredicted RBP9.02□□□□□ -0.97
CPSF7-216ENST00000536548 R3HDMLQ9H3Y0 253 aa9.02□□□□□ -0.97
CPSF7-216ENST00000536548 L2HGDHQ9H9P8 463 aa9.02□□□□□ -0.97
CPSF7-216ENST00000536548 TFIP11Q9UBB9 837 aaKnown RBP9.02□□□□□ -0.97
CPSF7-216ENST00000536548 RCOR1Q9UKL0 485 aa9.02□□□□□ -0.97
CPSF7-216ENST00000536548 U3KPZ7 1027 aaPredicted RBP9.02□□□□□ -0.97
CPSF7-216ENST00000536548 PITPNM2Q9BZ72 1349 aa9.02□□□□□ -0.97
CPSF7-216ENST00000536548 MRC1P22897 1456 aa9.02□□□□□ -0.97
CPSF7-216ENST00000536548 MED23Q9ULK4 1368 aa9.01□□□□□ -0.97
CPSF7-216ENST00000536548 GPR25O00155 361 aa9.01□□□□□ -0.97
CPSF7-216ENST00000536548 RNMTO43148 476 aaKnown RBP9.01□□□□□ -0.97
CPSF7-216ENST00000536548 RAD17O75943 681 aa9.01□□□□□ -0.97
CPSF7-216ENST00000536548 HMGB1P09429 215 aaKnown RBP9.01□□□□□ -0.97
CPSF7-216ENST00000536548 HSP90B1P14625 803 aaKnown RBP9.01□□□□□ -0.97
CPSF7-216ENST00000536548 FAM160A1Q05DH4 1040 aa9.01□□□□□ -0.97
CPSF7-216ENST00000536548 G3BP1Q13283 466 aaKnown RBP eCLIP9.01□□□□□ -0.97
CPSF7-216ENST00000536548 TOB2Q14106 344 aaPredicted RBP9.01□□□□□ -0.97
CPSF7-216ENST00000536548 FBXO38Q6PIJ6 1188 aa9.01□□□□□ -0.97
CPSF7-216ENST00000536548 CHRDL2Q6WN34 429 aa9.01□□□□□ -0.97
CPSF7-216ENST00000536548 TPTE2Q6XPS3 522 aa9.01□□□□□ -0.97
CPSF7-216ENST00000536548 SAMD7Q7Z3H4 446 aa9.01□□□□□ -0.97
CPSF7-216ENST00000536548 KRT26Q7Z3Y9 468 aa9.01□□□□□ -0.97
CPSF7-216ENST00000536548 AACSQ86V21 672 aa9.01□□□□□ -0.97
CPSF7-216ENST00000536548 DZIP3Q86Y13 1208 aaKnown RBP9.01□□□□□ -0.97
CPSF7-216ENST00000536548 RASAL3Q86YV0 1011 aa9.01□□□□□ -0.97
CPSF7-216ENST00000536548 CCAR1Q8IX12 1150 aaKnown RBP9.01□□□□□ -0.97
CPSF7-216ENST00000536548 BRF1Q92994 677 aa9.01□□□□□ -0.97
CPSF7-216ENST00000536548 ZNF496Q96IT1 587 aaPredicted RBP9.01□□□□□ -0.97
CPSF7-216ENST00000536548 PGBD1Q96JS3 809 aa9.01□□□□□ -0.97
CPSF7-216ENST00000536548 BPIFA3Q9BQP9 254 aa9.01□□□□□ -0.97
CPSF7-216ENST00000536548 FSD1Q9BTV5 496 aa9.01□□□□□ -0.97
CPSF7-216ENST00000536548 C9orf78Q9NZ63 289 aaPredicted RBP9.01□□□□□ -0.97
CPSF7-216ENST00000536548 CNOT7Q9UIV1 285 aaKnown RBP9.01□□□□□ -0.97
CPSF7-216ENST00000536548 IGSF3O75054 1194 aa9□□□□□ -0.97
CPSF7-216ENST00000536548 NBPF7P0C2Y1 421 aaPredicted RBP9□□□□□ -0.97
CPSF7-216ENST00000536548 H2AFXP16104 143 aaPredicted RBP9□□□□□ -0.97
CPSF7-216ENST00000536548 MNX1P50219 401 aaPredicted RBP9□□□□□ -0.97
CPSF7-216ENST00000536548 GPS2Q13227 327 aa9□□□□□ -0.97
CPSF7-216ENST00000536548 ELF2Q15723 593 aa9□□□□□ -0.97
CPSF7-216ENST00000536548 FAM173BQ6P4H8 233 aa9□□□□□ -0.97
CPSF7-216ENST00000536548 TMCO3Q6UWJ1 677 aa9□□□□□ -0.97
CPSF7-216ENST00000536548 TICAM2Q86XR7 235 aa9□□□□□ -0.97
CPSF7-216ENST00000536548 TXLNBQ8N3L3 684 aa9□□□□□ -0.97
CPSF7-216ENST00000536548 IL17REQ8NFR9 667 aa9□□□□□ -0.97
CPSF7-216ENST00000536548 NEK1Q96PY6 1258 aa9□□□□□ -0.97
CPSF7-216ENST00000536548 PHAXQ9H814 394 aaKnown RBP9□□□□□ -0.97
CPSF7-216ENST00000536548 ZNRF3Q9ULT6 936 aa9□□□□□ -0.97
CPSF7-216ENST00000536548 NIP7Q9Y221 180 aaKnown RBP eCLIP9□□□□□ -0.97
CPSF7-216ENST00000536548 PHLPP2Q6ZVD8 1323 aa9□□□□□ -0.97
CPSF7-216ENST00000536548 CBFA2T2O43439 604 aa8.99□□□□□ -0.97
CPSF7-216ENST00000536548 MYO1BO43795 1136 aa8.99□□□□□ -0.97
CPSF7-216ENST00000536548 SFPQP23246 707 aaKnown RBP eCLIP8.99□□□□□ -0.97
CPSF7-216ENST00000536548 CYP2C19P33261 490 aa8.99□□□□□ -0.97
CPSF7-216ENST00000536548 EIF4A1P60842 406 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms