RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 MANSC4A6NHS7 340 aaPredicted RBP17.44■□□□□ 0.38
UBE3B-206ENST00000536398 IGF2BP3O00425 579 aaKnown RBP eCLIP17.44■□□□□ 0.38
UBE3B-206ENST00000536398 CAPN15O75808 1086 aa17.44■□□□□ 0.38
UBE3B-206ENST00000536398 DCAF15Q66K64 600 aa17.44■□□□□ 0.38
UBE3B-206ENST00000536398 ZSCAN29Q8IWY8 852 aaPredicted RBP17.44■□□□□ 0.38
UBE3B-206ENST00000536398 HOOK2Q96ED9 719 aa17.44■□□□□ 0.38
UBE3B-206ENST00000536398 OTUD5Q96G74 571 aa17.44■□□□□ 0.38
UBE3B-206ENST00000536398 PTPN18Q99952 460 aa17.44■□□□□ 0.38
UBE3B-206ENST00000536398 AATFQ9NY61 560 aaKnown RBP eCLIP17.44■□□□□ 0.38
UBE3B-206ENST00000536398 PCDHB15Q9Y5E8 787 aa17.44■□□□□ 0.38
UBE3B-206ENST00000536398 ATRNL1Q5VV63 1379 aa17.43■□□□□ 0.38
UBE3B-206ENST00000536398 IFIT2P09913 472 aaKnown RBP17.43■□□□□ 0.38
UBE3B-206ENST00000536398 IFNL1Q8IU54 200 aa17.43■□□□□ 0.38
UBE3B-206ENST00000536398 MS4A4AQ96JQ5 239 aa17.43■□□□□ 0.38
UBE3B-206ENST00000536398 ZNF112Q9UJU3 913 aa17.43■□□□□ 0.38
UBE3B-206ENST00000536398 IDH1O75874 414 aaKnown RBP17.42■□□□□ 0.38
UBE3B-206ENST00000536398 DYNLL1P63167 89 aaKnown RBP17.42■□□□□ 0.38
UBE3B-206ENST00000536398 TEX11Q8IYF3 940 aa17.42■□□□□ 0.38
UBE3B-206ENST00000536398 CRBNQ96SW2 442 aa17.42■□□□□ 0.38
UBE3B-206ENST00000536398 SPDYE5A6NIY4 337 aa17.41■□□□□ 0.38
UBE3B-206ENST00000536398 PHF20L1A8MW92 1017 aa17.41■□□□□ 0.38
UBE3B-206ENST00000536398 CYP7A1P22680 504 aa17.41■□□□□ 0.38
UBE3B-206ENST00000536398 BRI3BPQ8WY22 251 aa17.41■□□□□ 0.38
UBE3B-206ENST00000536398 EDC3Q96F86 508 aaKnown RBP17.41■□□□□ 0.38
UBE3B-206ENST00000536398 MYO5AQ9Y4I1 1855 aaKnown RBP17.41■□□□□ 0.38
UBE3B-206ENST00000536398 TESPA1A2RU30 521 aaPredicted RBP17.4■□□□□ 0.38
UBE3B-206ENST00000536398 IRF6O14896 467 aa17.4■□□□□ 0.38
UBE3B-206ENST00000536398 INHBEP58166 350 aa17.4■□□□□ 0.38
UBE3B-206ENST00000536398 PPP4CP60510 307 aa17.4■□□□□ 0.38
UBE3B-206ENST00000536398 MAGEB6Q8N7X4 407 aa17.4■□□□□ 0.38
UBE3B-206ENST00000536398 DNAJC2Q99543 621 aaKnown RBP17.4■□□□□ 0.38
UBE3B-206ENST00000536398 LRRCC1Q9C099 1032 aa17.4■□□□□ 0.38
UBE3B-206ENST00000536398 DCTPP1Q9H773 170 aa17.4■□□□□ 0.38
UBE3B-206ENST00000536398 AK9Q5TCS8 1911 aa17.4■□□□□ 0.38
UBE3B-206ENST00000536398 FAM196BA6NMK8 535 aa17.39■□□□□ 0.37
UBE3B-206ENST00000536398 NPM3O75607 178 aaKnown RBP17.39■□□□□ 0.37
UBE3B-206ENST00000536398 BAG3O95817 575 aa17.39■□□□□ 0.37
UBE3B-206ENST00000536398 MAP3K10Q02779 954 aa17.39■□□□□ 0.37
UBE3B-206ENST00000536398 ERO1BQ86YB8 467 aa17.39■□□□□ 0.37
UBE3B-206ENST00000536398 MAPKAPK5Q8IW41 473 aa17.39■□□□□ 0.37
UBE3B-206ENST00000536398 MIGA1Q8NAN2 632 aa17.39■□□□□ 0.37
UBE3B-206ENST00000536398 TGFBRAP1Q8WUH2 860 aa17.39■□□□□ 0.37
UBE3B-206ENST00000536398 ZNF296Q8WUU4 475 aaPredicted RBP17.39■□□□□ 0.37
UBE3B-206ENST00000536398 NOL10Q9BSC4 688 aaKnown RBP17.39■□□□□ 0.37
UBE3B-206ENST00000536398 OSBPL5Q9H0X9 879 aaPredicted RBP17.39■□□□□ 0.37
UBE3B-206ENST00000536398 BOLA2Q9H3K6 86 aa17.39■□□□□ 0.37
UBE3B-206ENST00000536398 CCL15-CCL14A0A0B4J2E2 113 aa17.38■□□□□ 0.37
UBE3B-206ENST00000536398 GPR25O00155 361 aa17.38■□□□□ 0.37
UBE3B-206ENST00000536398 GOLIM4O00461 696 aa17.38■□□□□ 0.37
UBE3B-206ENST00000536398 MAP4K4O95819 1239 aaPredicted RBP17.38■□□□□ 0.37
UBE3B-206ENST00000536398 GTF2A2P52657 109 aa17.38■□□□□ 0.37
UBE3B-206ENST00000536398 DGKZQ13574 1117 aa17.38■□□□□ 0.37
UBE3B-206ENST00000536398 CCL15Q16663 113 aa17.38■□□□□ 0.37
UBE3B-206ENST00000536398 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.38■□□□□ 0.37
UBE3B-206ENST00000536398 MCOLN1Q9GZU1 580 aa17.38■□□□□ 0.37
UBE3B-206ENST00000536398 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.38■□□□□ 0.37
UBE3B-206ENST00000536398 MAP3K12Q12852 859 aa17.37■□□□□ 0.37
UBE3B-206ENST00000536398 PPIL2Q13356 520 aa17.37■□□□□ 0.37
UBE3B-206ENST00000536398 SLFNL1Q499Z3 407 aa17.37■□□□□ 0.37
UBE3B-206ENST00000536398 NOL9Q5SY16 702 aaKnown RBP17.37■□□□□ 0.37
UBE3B-206ENST00000536398 FAM43AQ8N2R8 423 aa17.37■□□□□ 0.37
UBE3B-206ENST00000536398 ABHD8Q96I13 439 aa17.37■□□□□ 0.37
UBE3B-206ENST00000536398 CFHR5Q9BXR6 569 aa17.37■□□□□ 0.37
UBE3B-206ENST00000536398 ALDH1A1P00352 501 aa17.36■□□□□ 0.37
UBE3B-206ENST00000536398 ATP5JP18859 108 aa17.36■□□□□ 0.37
UBE3B-206ENST00000536398 PPATQ06203 517 aa17.36■□□□□ 0.37
UBE3B-206ENST00000536398 CRHR2Q13324 411 aa17.36■□□□□ 0.37
UBE3B-206ENST00000536398 RRP1BQ14684 758 aaKnown RBP17.36■□□□□ 0.37
UBE3B-206ENST00000536398 SAP30BPQ9UHR5 308 aaKnown RBP17.36■□□□□ 0.37
UBE3B-206ENST00000536398 MAST2Q6P0Q8 1798 aa17.35■□□□□ 0.37
UBE3B-206ENST00000536398 TBC1D12O60347 775 aa17.35■□□□□ 0.37
UBE3B-206ENST00000536398 IGSF3O75054 1194 aa17.35■□□□□ 0.37
UBE3B-206ENST00000536398 CHGBP05060 677 aa17.35■□□□□ 0.37
UBE3B-206ENST00000536398 PDE6AP16499 860 aa17.35■□□□□ 0.37
UBE3B-206ENST00000536398 PLCG2P16885 1265 aa17.35■□□□□ 0.37
UBE3B-206ENST00000536398 SLC4A8Q2Y0W8 1093 aa17.35■□□□□ 0.37
UBE3B-206ENST00000536398 SLC9C2Q5TAH2 1124 aa17.35■□□□□ 0.37
UBE3B-206ENST00000536398 OTUD7BQ6GQQ9 843 aa17.35■□□□□ 0.37
UBE3B-206ENST00000536398 CCDC84Q86UT8 332 aaPredicted RBP17.35■□□□□ 0.37
UBE3B-206ENST00000536398 SCYL3Q8IZE3 742 aa17.35■□□□□ 0.37
UBE3B-206ENST00000536398 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.35■□□□□ 0.37
UBE3B-206ENST00000536398 PALD1Q9ULE6 856 aa17.35■□□□□ 0.37
UBE3B-206ENST00000536398 FLT1P17948 1338 aa17.35■□□□□ 0.37
UBE3B-206ENST00000536398 BTBD19C9JJ37 291 aa17.34■□□□□ 0.37
UBE3B-206ENST00000536398 CETPP11597 493 aa17.34■□□□□ 0.37
UBE3B-206ENST00000536398 PTPRAP18433 802 aa17.34■□□□□ 0.37
UBE3B-206ENST00000536398 SNAPC2Q13487 334 aa17.34■□□□□ 0.37
UBE3B-206ENST00000536398 TTF1Q15361 905 aaPredicted RBP17.34■□□□□ 0.37
UBE3B-206ENST00000536398 TSHZ3Q63HK5 1081 aa17.34■□□□□ 0.37
UBE3B-206ENST00000536398 DOCK2Q92608 1830 aa17.34■□□□□ 0.37
UBE3B-206ENST00000536398 HAUS7Q99871 368 aa17.34■□□□□ 0.37
UBE3B-206ENST00000536398 PAG1Q9NWQ8 432 aa17.34■□□□□ 0.37
UBE3B-206ENST00000536398 LAMB1P07942 1786 aa17.33■□□□□ 0.37
UBE3B-206ENST00000536398 ZNF532Q9HCE3 1301 aa17.33■□□□□ 0.36
UBE3B-206ENST00000536398 TCRBV5S4A2TA0A5A2 114 aa17.33■□□□□ 0.36
UBE3B-206ENST00000536398 FKTNO75072 461 aa17.33■□□□□ 0.36
UBE3B-206ENST00000536398 MOGSQ13724 837 aa17.33■□□□□ 0.36
UBE3B-206ENST00000536398 NOM1Q5C9Z4 860 aaKnown RBP17.33■□□□□ 0.36
UBE3B-206ENST00000536398 RIOK1Q9BRS2 568 aaKnown RBP17.33■□□□□ 0.36
UBE3B-206ENST00000536398 PICK1Q9NRD5 415 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms