RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 AKAP2Q9Y2D5 859 aa13.94□□□□□ -0.18
CLSTN3-206ENST00000535668 SZT2Q5T011 3432 aa13.93□□□□□ -0.18
CLSTN3-206ENST00000535668 GJB1P08034 283 aa13.93□□□□□ -0.18
CLSTN3-206ENST00000535668 GNAI3P08754 354 aa13.93□□□□□ -0.18
CLSTN3-206ENST00000535668 RHBDL3P58872 404 aa13.93□□□□□ -0.18
CLSTN3-206ENST00000535668 IRF5Q13568 498 aa13.93□□□□□ -0.18
CLSTN3-206ENST00000535668 RASGRF1Q13972 1273 aa13.93□□□□□ -0.18
CLSTN3-206ENST00000535668 ZFPM1Q8IX07 1006 aa13.93□□□□□ -0.18
CLSTN3-206ENST00000535668 PXYLP1Q8TE99 480 aa13.93□□□□□ -0.18
CLSTN3-206ENST00000535668 TBC1D2Q9BYX2 928 aa13.93□□□□□ -0.18
CLSTN3-206ENST00000535668 LRRFIP2Q9Y608 721 aaKnown RBP13.93□□□□□ -0.18
CLSTN3-206ENST00000535668 MYH2Q9UKX2 1941 aa13.92□□□□□ -0.18
CLSTN3-206ENST00000535668 CCER2I3L3R5 266 aa13.92□□□□□ -0.18
CLSTN3-206ENST00000535668 OSBPP22059 807 aa13.92□□□□□ -0.18
CLSTN3-206ENST00000535668 PSMC4P43686 418 aa13.92□□□□□ -0.18
CLSTN3-206ENST00000535668 GJA8P48165 433 aa13.92□□□□□ -0.18
CLSTN3-206ENST00000535668 RGS3P49796 1198 aa13.92□□□□□ -0.18
CLSTN3-206ENST00000535668 ZNF384Q8TF68 577 aa13.92□□□□□ -0.18
CLSTN3-206ENST00000535668 PTPRFP10586 1907 aa13.92□□□□□ -0.18
CLSTN3-206ENST00000535668 GRK4P32298 578 aa13.91□□□□□ -0.18
CLSTN3-206ENST00000535668 FXR1P51114 621 aaKnown RBP eCLIP13.91□□□□□ -0.18
CLSTN3-206ENST00000535668 TCP10Q12799 353 aa13.91□□□□□ -0.18
CLSTN3-206ENST00000535668 MVPQ14764 893 aaKnown RBP13.91□□□□□ -0.18
CLSTN3-206ENST00000535668 METTL16Q86W50 562 aaKnown RBP13.91□□□□□ -0.18
CLSTN3-206ENST00000535668 SHISA4Q96DD7 197 aa13.91□□□□□ -0.18
CLSTN3-206ENST00000535668 MEIS3Q99687 375 aa13.91□□□□□ -0.18
CLSTN3-206ENST00000535668 MROH7-TTC4A0A0A0MT08 1334 aa13.9□□□□□ -0.18
CLSTN3-206ENST00000535668 PHIPQ8WWQ0 1821 aa13.9□□□□□ -0.18
CLSTN3-206ENST00000535668 DOCK2Q92608 1830 aa13.9□□□□□ -0.18
CLSTN3-206ENST00000535668 A0A1B0GUL7 405 aa13.9□□□□□ -0.18
CLSTN3-206ENST00000535668 ARID4AP29374 1257 aaPredicted RBP13.9□□□□□ -0.18
CLSTN3-206ENST00000535668 SLC4A8Q2Y0W8 1093 aa13.9□□□□□ -0.18
CLSTN3-206ENST00000535668 SLAIN1Q8ND83 568 aa13.9□□□□□ -0.18
CLSTN3-206ENST00000535668 XAGE2Q96GT9 111 aa13.9□□□□□ -0.18
CLSTN3-206ENST00000535668 OSBPL5Q9H0X9 879 aaPredicted RBP13.9□□□□□ -0.18
CLSTN3-206ENST00000535668 SIL1Q9H173 461 aa13.9□□□□□ -0.18
CLSTN3-206ENST00000535668 PRO3102Q9H379 93 aa13.9□□□□□ -0.18
CLSTN3-206ENST00000535668 GPR108Q9NPR9 543 aa13.9□□□□□ -0.18
CLSTN3-206ENST00000535668 CPA4Q9UI42 421 aa13.9□□□□□ -0.18
CLSTN3-206ENST00000535668 PA2G4Q9UQ80 394 aaKnown RBP13.9□□□□□ -0.18
CLSTN3-206ENST00000535668 ZHX2Q9Y6X8 837 aa13.9□□□□□ -0.18
CLSTN3-206ENST00000535668 LAMA3Q16787 3333 aa13.9□□□□□ -0.18
CLSTN3-206ENST00000535668 DDTLA6NHG4 134 aaPredicted RBP13.89□□□□□ -0.19
CLSTN3-206ENST00000535668 ADORA1P30542 326 aa13.89□□□□□ -0.19
CLSTN3-206ENST00000535668 FCGRTP55899 365 aa13.89□□□□□ -0.19
CLSTN3-206ENST00000535668 TIMM10P62072 90 aa13.89□□□□□ -0.19
CLSTN3-206ENST00000535668 PROCA1Q8NCQ7 364 aaPredicted RBP13.89□□□□□ -0.19
CLSTN3-206ENST00000535668 SH3TC2Q8TF17 1288 aa13.89□□□□□ -0.19
CLSTN3-206ENST00000535668 NSUN4Q96CB9 384 aaKnown RBP13.89□□□□□ -0.19
CLSTN3-206ENST00000535668 ZNF512BQ96KM6 892 aaPredicted RBP13.89□□□□□ -0.19
CLSTN3-206ENST00000535668 DDX4Q9NQI0 724 aaKnown RBP13.89□□□□□ -0.19
CLSTN3-206ENST00000535668 PICK1Q9NRD5 415 aa13.89□□□□□ -0.19
CLSTN3-206ENST00000535668 ZSWIM8A7E2V4 1837 aa13.89□□□□□ -0.19
CLSTN3-206ENST00000535668 IPO8O15397 1037 aaKnown RBP13.88□□□□□ -0.19
CLSTN3-206ENST00000535668 SRGAP3O43295 1099 aa13.88□□□□□ -0.19
CLSTN3-206ENST00000535668 LDHCP07864 332 aa13.88□□□□□ -0.19
CLSTN3-206ENST00000535668 MECOMQ03112 1051 aa13.88□□□□□ -0.19
CLSTN3-206ENST00000535668 SH3D19Q5HYK7 790 aa13.88□□□□□ -0.19
CLSTN3-206ENST00000535668 TMED8Q6PL24 325 aaPredicted RBP13.88□□□□□ -0.19
CLSTN3-206ENST00000535668 GINM1Q9NU53 330 aa13.88□□□□□ -0.19
CLSTN3-206ENST00000535668 HMG20BQ9P0W2 317 aa13.88□□□□□ -0.19
CLSTN3-206ENST00000535668 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.88□□□□□ -0.19
CLSTN3-206ENST00000535668 AGTPBP1Q9UPW5 1226 aa13.88□□□□□ -0.19
CLSTN3-206ENST00000535668 AK9Q5TCS8 1911 aa13.88□□□□□ -0.19
CLSTN3-206ENST00000535668 MYPNQ86TC9 1320 aa13.88□□□□□ -0.19
CLSTN3-206ENST00000535668 MGAMO43451 1857 aa13.87□□□□□ -0.19
CLSTN3-206ENST00000535668 DOCK1Q14185 1865 aa13.87□□□□□ -0.19
CLSTN3-206ENST00000535668 BTDP43251 543 aa13.87□□□□□ -0.19
CLSTN3-206ENST00000535668 PPP4CP60510 307 aa13.87□□□□□ -0.19
CLSTN3-206ENST00000535668 GSTO1P78417 241 aa13.87□□□□□ -0.19
CLSTN3-206ENST00000535668 MTFR1Q15390 333 aa13.87□□□□□ -0.19
CLSTN3-206ENST00000535668 FAM110CQ1W6H9 321 aa13.87□□□□□ -0.19
CLSTN3-206ENST00000535668 ERICH6Q7L0X2 663 aa13.87□□□□□ -0.19
CLSTN3-206ENST00000535668 DZIP1Q86YF9 867 aaKnown RBP13.87□□□□□ -0.19
CLSTN3-206ENST00000535668 RAET1EQ8TD07 263 aa13.87□□□□□ -0.19
CLSTN3-206ENST00000535668 PAK6Q9NQU5 681 aaPredicted RBP13.87□□□□□ -0.19
CLSTN3-206ENST00000535668 HERC5Q9UII4 1024 aaKnown RBP13.87□□□□□ -0.19
CLSTN3-206ENST00000535668 A0A1W2PPC1 479 aa13.86□□□□□ -0.19
CLSTN3-206ENST00000535668 FMNL1O95466 1100 aaPredicted RBP13.86□□□□□ -0.19
CLSTN3-206ENST00000535668 SGPL1O95470 568 aa13.86□□□□□ -0.19
CLSTN3-206ENST00000535668 CYP2C8P10632 490 aa13.86□□□□□ -0.19
CLSTN3-206ENST00000535668 CCL5P13501 91 aa13.86□□□□□ -0.19
CLSTN3-206ENST00000535668 GCLCP48506 637 aaPredicted RBP13.86□□□□□ -0.19
CLSTN3-206ENST00000535668 UBXN2AP68543 259 aa13.86□□□□□ -0.19
CLSTN3-206ENST00000535668 PRKCZQ05513 592 aa13.86□□□□□ -0.19
CLSTN3-206ENST00000535668 TFCP2Q12800 502 aa13.86□□□□□ -0.19
CLSTN3-206ENST00000535668 ATF7IPQ6VMQ6 1270 aa13.86□□□□□ -0.19
CLSTN3-206ENST00000535668 SPATA5Q8NB90 893 aa13.86□□□□□ -0.19
CLSTN3-206ENST00000535668 CRISPLD2Q9H0B8 497 aa13.86□□□□□ -0.19
CLSTN3-206ENST00000535668 DHX36Q9H2U1 1008 aaKnown RBP13.86□□□□□ -0.19
CLSTN3-206ENST00000535668 COLQQ9Y215 455 aaPredicted RBP13.86□□□□□ -0.19
CLSTN3-206ENST00000535668 DOCK3Q8IZD9 2030 aa13.86□□□□□ -0.19
CLSTN3-206ENST00000535668 H0YGN5 161 aa13.85□□□□□ -0.19
CLSTN3-206ENST00000535668 GNAI2P04899 355 aa13.85□□□□□ -0.19
CLSTN3-206ENST00000535668 UQCRFS1P1P0C7P4 283 aa13.85□□□□□ -0.19
CLSTN3-206ENST00000535668 TRIM27P14373 513 aa13.85□□□□□ -0.19
CLSTN3-206ENST00000535668 POLA2Q14181 598 aa13.85□□□□□ -0.19
CLSTN3-206ENST00000535668 WDR18Q9BV38 432 aa13.85□□□□□ -0.19
CLSTN3-206ENST00000535668 ABCF2Q9UG63 623 aa13.85□□□□□ -0.19
CLSTN3-206ENST00000535668 PNMA3Q9UL41 463 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms