RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 FAM83AQ86UY5 434 aa18.64■□□□□ 0.58
CNN1-202ENST00000535659 LDHDQ86WU2 507 aa18.64■□□□□ 0.58
CNN1-202ENST00000535659 IFNL3Q8IZI9 196 aa18.64■□□□□ 0.58
CNN1-202ENST00000535659 FAM151AQ8WW52 585 aa18.64■□□□□ 0.58
CNN1-202ENST00000535659 NACAP1Q9BZK3 213 aa18.64■□□□□ 0.58
CNN1-202ENST00000535659 DCP1AQ9NPI6 582 aaPredicted RBP18.64■□□□□ 0.58
CNN1-202ENST00000535659 MKRN1Q9UHC7 482 aaKnown RBP18.64■□□□□ 0.58
CNN1-202ENST00000535659 TCP10Q12799 353 aa18.64■□□□□ 0.57
CNN1-202ENST00000535659 RASA3Q14644 834 aa18.64■□□□□ 0.57
CNN1-202ENST00000535659 ZFPM1Q8IX07 1006 aa18.64■□□□□ 0.57
CNN1-202ENST00000535659 DDRGK1Q96HY6 314 aa18.64■□□□□ 0.57
CNN1-202ENST00000535659 DEFB129Q9H1M3 183 aa18.64■□□□□ 0.57
CNN1-202ENST00000535659 SCAF8Q9UPN6 1271 aaKnown RBP18.64■□□□□ 0.57
CNN1-202ENST00000535659 C8orf34Q49A92 452 aa18.63■□□□□ 0.57
CNN1-202ENST00000535659 SULF1Q8IWU6 871 aa18.63■□□□□ 0.57
CNN1-202ENST00000535659 DSCC1Q9BVC3 393 aa18.63■□□□□ 0.57
CNN1-202ENST00000535659 OSBPL5Q9H0X9 879 aaPredicted RBP18.63■□□□□ 0.57
CNN1-202ENST00000535659 ECM29Q5VYK3 1845 aa18.63■□□□□ 0.57
CNN1-202ENST00000535659 FLT1P17948 1338 aa18.62■□□□□ 0.57
CNN1-202ENST00000535659 CNTNAP1P78357 1384 aa18.62■□□□□ 0.57
CNN1-202ENST00000535659 KIF3CO14782 793 aa18.62■□□□□ 0.57
CNN1-202ENST00000535659 FOXP2O15409 715 aa18.62■□□□□ 0.57
CNN1-202ENST00000535659 ALX1Q15699 326 aa18.62■□□□□ 0.57
CNN1-202ENST00000535659 CDC37L1Q7L3B6 337 aa18.62■□□□□ 0.57
CNN1-202ENST00000535659 KRT26Q7Z3Y9 468 aa18.62■□□□□ 0.57
CNN1-202ENST00000535659 EIF5BO60841 1220 aaKnown RBP18.61■□□□□ 0.57
CNN1-202ENST00000535659 FGAP02671 866 aa18.61■□□□□ 0.57
CNN1-202ENST00000535659 PTH1RQ03431 593 aa18.61■□□□□ 0.57
CNN1-202ENST00000535659 MAP1SQ66K74 1059 aaPredicted RBP18.61■□□□□ 0.57
CNN1-202ENST00000535659 USP48Q86UV5 1035 aa18.61■□□□□ 0.57
CNN1-202ENST00000535659 MAP4K1Q92918 833 aa18.61■□□□□ 0.57
CNN1-202ENST00000535659 LSG1Q9H089 658 aaKnown RBP18.61■□□□□ 0.57
CNN1-202ENST00000535659 DHX36Q9H2U1 1008 aaKnown RBP18.61■□□□□ 0.57
CNN1-202ENST00000535659 EPB41L4AQ9HCS5 686 aaPredicted RBP18.61■□□□□ 0.57
CNN1-202ENST00000535659 ANO2Q9NQ90 1003 aa18.61■□□□□ 0.57
CNN1-202ENST00000535659 MCM9Q9NXL9 1143 aa18.61■□□□□ 0.57
CNN1-202ENST00000535659 PPP2R3BQ9Y5P8 575 aa18.61■□□□□ 0.57
CNN1-202ENST00000535659 USP17L12C9JPN9 530 aa18.6■□□□□ 0.57
CNN1-202ENST00000535659 USP17L21D6R901 530 aa18.6■□□□□ 0.57
CNN1-202ENST00000535659 REC8O95072 547 aa18.6■□□□□ 0.57
CNN1-202ENST00000535659 TDO2P48775 406 aa18.6■□□□□ 0.57
CNN1-202ENST00000535659 ZSCAN29Q8IWY8 852 aaPredicted RBP18.6■□□□□ 0.57
CNN1-202ENST00000535659 TMEM39BQ9GZU3 492 aa18.6■□□□□ 0.57
CNN1-202ENST00000535659 NAPBQ9H115 298 aa18.6■□□□□ 0.57
CNN1-202ENST00000535659 SAP30BPQ9UHR5 308 aaKnown RBP18.6■□□□□ 0.57
CNN1-202ENST00000535659 PALD1Q9ULE6 856 aa18.6■□□□□ 0.57
CNN1-202ENST00000535659 POLR3DP05423 398 aaPredicted RBP18.59■□□□□ 0.57
CNN1-202ENST00000535659 SBK1Q52WX2 424 aa18.59■□□□□ 0.57
CNN1-202ENST00000535659 CHADLQ6NUI6 762 aa18.59■□□□□ 0.57
CNN1-202ENST00000535659 CTR9Q6PD62 1173 aa18.59■□□□□ 0.57
CNN1-202ENST00000535659 SH3BP5LQ7L8J4 393 aa18.59■□□□□ 0.57
CNN1-202ENST00000535659 DDTLA6NHG4 134 aaPredicted RBP18.59■□□□□ 0.57
CNN1-202ENST00000535659 TTC6Q86TZ1 520 aa18.59■□□□□ 0.57
CNN1-202ENST00000535659 AMOTL1Q8IY63 956 aa18.59■□□□□ 0.57
CNN1-202ENST00000535659 TEPSINQ96N21 525 aa18.59■□□□□ 0.57
CNN1-202ENST00000535659 GLIS2Q9BZE0 524 aaPredicted RBP18.59■□□□□ 0.57
CNN1-202ENST00000535659 CTNNA3Q9UI47 895 aa18.59■□□□□ 0.57
CNN1-202ENST00000535659 U3KPZ7 1027 aaPredicted RBP18.59■□□□□ 0.57
CNN1-202ENST00000535659 ADM5C9JUS6 153 aa18.58■□□□□ 0.56
CNN1-202ENST00000535659 C12orf60Q5U649 245 aa18.58■□□□□ 0.56
CNN1-202ENST00000535659 PRAMEF18Q5VWM3 479 aa18.58■□□□□ 0.56
CNN1-202ENST00000535659 PI4KBQ9UBF8 816 aa18.58■□□□□ 0.56
CNN1-202ENST00000535659 ARPP21Q9UBL0 812 aaPredicted RBP18.58■□□□□ 0.56
CNN1-202ENST00000535659 FOCADQ5VW36 1801 aa18.57■□□□□ 0.56
CNN1-202ENST00000535659 CDK5RAP2Q96SN8 1893 aa18.57■□□□□ 0.56
CNN1-202ENST00000535659 MINDY4BA8MYZ0 360 aa18.57■□□□□ 0.56
CNN1-202ENST00000535659 SEC24BO95487 1268 aa18.57■□□□□ 0.56
CNN1-202ENST00000535659 PLCD1P51178 756 aa18.57■□□□□ 0.56
CNN1-202ENST00000535659 SUPT20HL1Q3ZLR7 823 aa18.57■□□□□ 0.56
CNN1-202ENST00000535659 NBPF12Q5TAG4 269 aaPredicted RBP18.57■□□□□ 0.56
CNN1-202ENST00000535659 FOXP4Q8IVH2 680 aaPredicted RBP18.57■□□□□ 0.56
CNN1-202ENST00000535659 ZMYM6O95789 1325 aa18.57■□□□□ 0.56
CNN1-202ENST00000535659 ATRNL1Q5VV63 1379 aa18.57■□□□□ 0.56
CNN1-202ENST00000535659 EPB41L2O43491 1005 aaKnown RBP18.56■□□□□ 0.56
CNN1-202ENST00000535659 TOMM70O94826 608 aa18.56■□□□□ 0.56
CNN1-202ENST00000535659 HLA-DOAP06340 250 aa18.56■□□□□ 0.56
CNN1-202ENST00000535659 CYP2D6P10635 497 aa18.56■□□□□ 0.56
CNN1-202ENST00000535659 SLC4A8Q2Y0W8 1093 aa18.56■□□□□ 0.56
CNN1-202ENST00000535659 DLK2Q6UY11 383 aa18.56■□□□□ 0.56
CNN1-202ENST00000535659 CDAN1Q8IWY9 1227 aa18.56■□□□□ 0.56
CNN1-202ENST00000535659 CSRNP1Q96S65 589 aa18.56■□□□□ 0.56
CNN1-202ENST00000535659 USP26Q9BXU7 913 aa18.56■□□□□ 0.56
CNN1-202ENST00000535659 RBM8AQ9Y5S9 174 aaKnown RBP18.56■□□□□ 0.56
CNN1-202ENST00000535659 COL2A1P02458 1487 aaPredicted RBP18.56■□□□□ 0.56
CNN1-202ENST00000535659 NAV1Q8NEY1 1877 aa18.56■□□□□ 0.56
CNN1-202ENST00000535659 POLR2AP24928 1970 aaKnown RBP18.56■□□□□ 0.56
CNN1-202ENST00000535659 CYP2D7A0A087X1C5 515 aa18.55■□□□□ 0.56
CNN1-202ENST00000535659 ZNF213O14771 459 aa18.54■□□□□ 0.56
CNN1-202ENST00000535659 ITGBL1O95965 494 aaPredicted RBP18.54■□□□□ 0.56
CNN1-202ENST00000535659 PPARAQ07869 468 aa18.54■□□□□ 0.56
CNN1-202ENST00000535659 NECTIN1Q15223 517 aa18.54■□□□□ 0.56
CNN1-202ENST00000535659 IMMTQ16891 758 aaKnown RBP18.54■□□□□ 0.56
CNN1-202ENST00000535659 RBM46Q8TBY0 533 aaKnown RBP18.54■□□□□ 0.56
CNN1-202ENST00000535659 HOOK2Q96ED9 719 aa18.54■□□□□ 0.56
CNN1-202ENST00000535659 CDCA5Q96FF9 252 aa18.54■□□□□ 0.56
CNN1-202ENST00000535659 BACH2Q9BYV9 841 aa18.54■□□□□ 0.56
CNN1-202ENST00000535659 ANAPC4Q9UJX5 808 aa18.54■□□□□ 0.56
CNN1-202ENST00000535659 MAP3K10Q02779 954 aa18.54■□□□□ 0.56
CNN1-202ENST00000535659 METTL16Q86W50 562 aaKnown RBP18.54■□□□□ 0.56
CNN1-202ENST00000535659 SMC1BQ8NDV3 1235 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms