RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 DOCK2Q92608 1830 aa26.45■■□□□ 1.82
SSPN-204ENST00000535504 SH3RF3Q8TEJ3 882 aaPredicted RBP26.45■■□□□ 1.82
SSPN-204ENST00000535504 FZD1Q9UP38 647 aa26.45■■□□□ 1.82
SSPN-204ENST00000535504 MYO5AQ9Y4I1 1855 aaKnown RBP26.45■■□□□ 1.82
SSPN-204ENST00000535504 MAGEB6P1A0A0J9YX57 407 aa26.44■■□□□ 1.82
SSPN-204ENST00000535504 PDE6AP16499 860 aa26.44■■□□□ 1.82
SSPN-204ENST00000535504 USP5P45974 858 aa26.44■■□□□ 1.82
SSPN-204ENST00000535504 MIGA1Q8NAN2 632 aa26.44■■□□□ 1.82
SSPN-204ENST00000535504 WRNIP1Q96S55 665 aa26.44■■□□□ 1.82
SSPN-204ENST00000535504 TRIM34Q9BYJ4 488 aa26.44■■□□□ 1.82
SSPN-204ENST00000535504 FAM155AB1AL88 458 aaPredicted RBP26.43■■□□□ 1.82
SSPN-204ENST00000535504 CA12O43570 354 aa26.43■■□□□ 1.82
SSPN-204ENST00000535504 MIGA2Q7L4E1 593 aa26.43■■□□□ 1.82
SSPN-204ENST00000535504 CDAN1Q8IWY9 1227 aa26.43■■□□□ 1.82
SSPN-204ENST00000535504 OSBPL5Q9H0X9 879 aaPredicted RBP26.43■■□□□ 1.82
SSPN-204ENST00000535504 DHX36Q9H2U1 1008 aaKnown RBP26.43■■□□□ 1.82
SSPN-204ENST00000535504 KIF23Q02241 960 aaPredicted RBP26.42■■□□□ 1.82
SSPN-204ENST00000535504 SREBF2Q12772 1141 aa26.42■■□□□ 1.82
SSPN-204ENST00000535504 B4GALNT3Q6L9W6 998 aa26.42■■□□□ 1.82
SSPN-204ENST00000535504 SMC5Q8IY18 1101 aa26.42■■□□□ 1.82
SSPN-204ENST00000535504 TGFBRAP1Q8WUH2 860 aa26.42■■□□□ 1.82
SSPN-204ENST00000535504 RFX7Q2KHR2 1363 aa26.42■■□□□ 1.82
SSPN-204ENST00000535504 THSD7BQ9C0I4 1608 aa26.42■■□□□ 1.82
SSPN-204ENST00000535504 ZNF532Q9HCE3 1301 aa26.41■■□□□ 1.82
SSPN-204ENST00000535504 HLA-DOAP06340 250 aa26.41■■□□□ 1.82
SSPN-204ENST00000535504 ZBTB48P10074 688 aaPredicted RBP26.41■■□□□ 1.82
SSPN-204ENST00000535504 ADGRA1Q86SQ6 560 aa26.41■■□□□ 1.82
SSPN-204ENST00000535504 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.41■■□□□ 1.82
SSPN-204ENST00000535504 EDC3Q96F86 508 aaKnown RBP26.41■■□□□ 1.82
SSPN-204ENST00000535504 CRNKL1Q9BZJ0 848 aaKnown RBP26.41■■□□□ 1.82
SSPN-204ENST00000535504 DDX4Q9NQI0 724 aaKnown RBP26.41■■□□□ 1.82
SSPN-204ENST00000535504 WBP1LQ9NX94 342 aa26.41■■□□□ 1.82
SSPN-204ENST00000535504 MKRN3Q13064 507 aaKnown RBP26.4■■□□□ 1.82
SSPN-204ENST00000535504 LNPKQ9C0E8 428 aa26.4■■□□□ 1.82
SSPN-204ENST00000535504 ELP3Q9H9T3 547 aa26.4■■□□□ 1.82
SSPN-204ENST00000535504 COL2A1P02458 1487 aaPredicted RBP26.39■■□□□ 1.82
SSPN-204ENST00000535504 CENPBP07199 599 aaPredicted RBP26.39■■□□□ 1.82
SSPN-204ENST00000535504 DYNLL1P63167 89 aaKnown RBP26.39■■□□□ 1.82
SSPN-204ENST00000535504 SPRYD7Q5W111 196 aa26.39■■□□□ 1.82
SSPN-204ENST00000535504 TSHZ3Q63HK5 1081 aa26.39■■□□□ 1.82
SSPN-204ENST00000535504 MAPKAPK5Q8IW41 473 aa26.39■■□□□ 1.82
SSPN-204ENST00000535504 ZFPM1Q8IX07 1006 aa26.39■■□□□ 1.82
SSPN-204ENST00000535504 DDRGK1Q96HY6 314 aa26.39■■□□□ 1.82
SSPN-204ENST00000535504 WNK4Q96J92 1243 aa26.39■■□□□ 1.82
SSPN-204ENST00000535504 ATRNL1Q5VV63 1379 aa26.38■■□□□ 1.81
SSPN-204ENST00000535504 NEFLP07196 543 aa26.38■■□□□ 1.81
SSPN-204ENST00000535504 ZFYP08048 801 aaPredicted RBP26.38■■□□□ 1.81
SSPN-204ENST00000535504 ADD2P35612 726 aa26.38■■□□□ 1.81
SSPN-204ENST00000535504 CTCFP49711 727 aaPredicted RBP26.38■■□□□ 1.81
SSPN-204ENST00000535504 VGLL4Q14135 290 aa26.38■■□□□ 1.81
SSPN-204ENST00000535504 UBE3CQ15386 1083 aa26.38■■□□□ 1.81
SSPN-204ENST00000535504 CHD1LQ86WJ1 897 aa26.38■■□□□ 1.81
SSPN-204ENST00000535504 CRACR2BQ8N4Y2 399 aaPredicted RBP26.38■■□□□ 1.81
SSPN-204ENST00000535504 KBTBD3Q8NAB2 608 aa26.38■■□□□ 1.81
SSPN-204ENST00000535504 CLMNQ96JQ2 1002 aa26.38■■□□□ 1.81
SSPN-204ENST00000535504 PI4KBQ9UBF8 816 aa26.38■■□□□ 1.81
SSPN-204ENST00000535504 FLT1P17948 1338 aa26.38■■□□□ 1.81
SSPN-204ENST00000535504 DDTLA6NHG4 134 aaPredicted RBP26.37■■□□□ 1.81
SSPN-204ENST00000535504 MANSC4A6NHS7 340 aaPredicted RBP26.37■■□□□ 1.81
SSPN-204ENST00000535504 IGHDP01880 384 aa26.37■■□□□ 1.81
SSPN-204ENST00000535504 INHBEP58166 350 aa26.37■■□□□ 1.81
SSPN-204ENST00000535504 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.37■■□□□ 1.81
SSPN-204ENST00000535504 OTUD7BQ6GQQ9 843 aa26.36■■□□□ 1.81
SSPN-204ENST00000535504 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.36■■□□□ 1.81
SSPN-204ENST00000535504 AMOTL1Q8IY63 956 aa26.36■■□□□ 1.81
SSPN-204ENST00000535504 OPTNQ96CV9 577 aa26.36■■□□□ 1.81
SSPN-204ENST00000535504 FSD1Q9BTV5 496 aa26.36■■□□□ 1.81
SSPN-204ENST00000535504 PICK1Q9NRD5 415 aa26.36■■□□□ 1.81
SSPN-204ENST00000535504 HERC5Q9UII4 1024 aaKnown RBP26.36■■□□□ 1.81
SSPN-204ENST00000535504 MYH7P12883 1935 aa26.35■■□□□ 1.81
SSPN-204ENST00000535504 NUCB1Q02818 461 aa26.35■■□□□ 1.81
SSPN-204ENST00000535504 ERO1BQ86YB8 467 aa26.35■■□□□ 1.81
SSPN-204ENST00000535504 OTUD7AQ8TE49 926 aaPredicted RBP26.35■■□□□ 1.81
SSPN-204ENST00000535504 TBC1D12O60347 775 aa26.34■■□□□ 1.81
SSPN-204ENST00000535504 PDE1AP54750 535 aa26.34■■□□□ 1.81
SSPN-204ENST00000535504 TTC6Q86TZ1 520 aa26.34■■□□□ 1.81
SSPN-204ENST00000535504 ZKSCAN4Q969J2 545 aaPredicted RBP26.34■■□□□ 1.81
SSPN-204ENST00000535504 OTOFQ9HC10 1997 aa26.33■■□□□ 1.81
SSPN-204ENST00000535504 TCRBV5S4A2TA0A5A2 114 aa26.33■■□□□ 1.81
SSPN-204ENST00000535504 SH3BP5LQ7L8J4 393 aa26.33■■□□□ 1.81
SSPN-204ENST00000535504 PI4K2BQ8TCG2 481 aa26.33■■□□□ 1.81
SSPN-204ENST00000535504 OTUD5Q96G74 571 aa26.33■■□□□ 1.81
SSPN-204ENST00000535504 ZIC5Q96T25 663 aa26.33■■□□□ 1.81
SSPN-204ENST00000535504 RIOK1Q9BRS2 568 aaKnown RBP26.33■■□□□ 1.81
SSPN-204ENST00000535504 STAP2Q9UGK3 403 aa26.33■■□□□ 1.81
SSPN-204ENST00000535504 ZNF112Q9UJU3 913 aa26.33■■□□□ 1.81
SSPN-204ENST00000535504 SPDYE5A6NIY4 337 aa26.32■■□□□ 1.8
SSPN-204ENST00000535504 FOXN1O15353 648 aa26.32■■□□□ 1.8
SSPN-204ENST00000535504 MBD4O95243 580 aa26.32■■□□□ 1.8
SSPN-204ENST00000535504 ALDH1A1P00352 501 aa26.32■■□□□ 1.8
SSPN-204ENST00000535504 POLR3DP05423 398 aaPredicted RBP26.32■■□□□ 1.8
SSPN-204ENST00000535504 GTF2A2P52657 109 aa26.32■■□□□ 1.8
SSPN-204ENST00000535504 FOXP4Q8IVH2 680 aaPredicted RBP26.32■■□□□ 1.8
SSPN-204ENST00000535504 SAGE1Q9NXZ1 904 aa26.32■■□□□ 1.8
SSPN-204ENST00000535504 SAP30BPQ9UHR5 308 aaKnown RBP26.32■■□□□ 1.8
SSPN-204ENST00000535504 RNF113AO15541 343 aaKnown RBP26.31■■□□□ 1.8
SSPN-204ENST00000535504 CTNND1O60716 968 aaKnown RBP26.31■■□□□ 1.8
SSPN-204ENST00000535504 INPP5BP32019 993 aa26.31■■□□□ 1.8
SSPN-204ENST00000535504 NOL9Q5SY16 702 aaKnown RBP26.31■■□□□ 1.8
SSPN-204ENST00000535504 SCYL3Q8IZE3 742 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms