RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 TFF2Q03403 129 aa9.81□□□□□ -0.84
CPSF7-214ENST00000535222 CACNB2Q08289 660 aaPredicted RBP9.81□□□□□ -0.84
CPSF7-214ENST00000535222 CCDC85BQ15834 202 aaPredicted RBP9.81□□□□□ -0.84
CPSF7-214ENST00000535222 TRMT44Q8IYL2 757 aaKnown RBP9.81□□□□□ -0.84
CPSF7-214ENST00000535222 TTLL11Q8NHH1 800 aa9.81□□□□□ -0.84
CPSF7-214ENST00000535222 TRIM43Q96BQ3 446 aaPredicted RBP9.81□□□□□ -0.84
CPSF7-214ENST00000535222 ZNF341Q9BYN7 854 aa9.81□□□□□ -0.84
CPSF7-214ENST00000535222 ANKRD2Q9GZV1 360 aa9.81□□□□□ -0.84
CPSF7-214ENST00000535222 EPHB4P54760 987 aa9.8□□□□□ -0.84
CPSF7-214ENST00000535222 CCDC191Q8NCU4 936 aa9.8□□□□□ -0.84
CPSF7-214ENST00000535222 PDLIM7Q9NR12 457 aa9.8□□□□□ -0.84
CPSF7-214ENST00000535222 PLXNB2O15031 1838 aa9.79□□□□□ -0.84
CPSF7-214ENST00000535222 ATRXP46100 2492 aa9.79□□□□□ -0.84
CPSF7-214ENST00000535222 CHD6Q8TD26 2715 aa9.79□□□□□ -0.84
CPSF7-214ENST00000535222 CFAP47Q6ZTR5 3102 aa9.79□□□□□ -0.84
CPSF7-214ENST00000535222 DNM1LO00429 736 aa9.79□□□□□ -0.84
CPSF7-214ENST00000535222 POU3F3P20264 500 aaPredicted RBP9.79□□□□□ -0.84
CPSF7-214ENST00000535222 RASIP1Q5U651 963 aa9.79□□□□□ -0.84
CPSF7-214ENST00000535222 ANKRD13CQ8N6S4 541 aa9.79□□□□□ -0.84
CPSF7-214ENST00000535222 HERVK_113Q902F9 699 aa9.79□□□□□ -0.84
CPSF7-214ENST00000535222 USP6NLQ92738 828 aa9.79□□□□□ -0.84
CPSF7-214ENST00000535222 CCDC85AQ96PX6 553 aaPredicted RBP9.79□□□□□ -0.84
CPSF7-214ENST00000535222 MRIQ9BWK5 157 aa9.79□□□□□ -0.84
CPSF7-214ENST00000535222 AFG3L2Q9Y4W6 797 aa9.79□□□□□ -0.84
CPSF7-214ENST00000535222 BRWD1Q9NSI6 2320 aa9.78□□□□□ -0.84
CPSF7-214ENST00000535222 RLFQ13129 1914 aa9.78□□□□□ -0.84
CPSF7-214ENST00000535222 PRRC2BQ5JSZ5 2229 aaKnown RBP9.78□□□□□ -0.84
CPSF7-214ENST00000535222 DNAH14Q0VDD8 3507 aa9.78□□□□□ -0.84
CPSF7-214ENST00000535222 ITGB8P26012 769 aa9.78□□□□□ -0.84
CPSF7-214ENST00000535222 CCND3P30281 292 aaPredicted RBP9.78□□□□□ -0.84
CPSF7-214ENST00000535222 ATN1P54259 1190 aaPredicted RBP9.78□□□□□ -0.84
CPSF7-214ENST00000535222 CTSWP56202 376 aa9.78□□□□□ -0.84
CPSF7-214ENST00000535222 HDLBPQ00341 1268 aaKnown RBP9.78□□□□□ -0.84
CPSF7-214ENST00000535222 SLC39A5Q6ZMH5 540 aa9.78□□□□□ -0.84
CPSF7-214ENST00000535222 ERMP1Q7Z2K6 904 aa9.78□□□□□ -0.84
CPSF7-214ENST00000535222 SH3RF1Q7Z6J0 888 aa9.78□□□□□ -0.84
CPSF7-214ENST00000535222 SMCR8Q8TEV9 937 aaPredicted RBP9.78□□□□□ -0.84
CPSF7-214ENST00000535222 LPAR1Q92633 364 aa9.78□□□□□ -0.84
CPSF7-214ENST00000535222 PBX4Q9BYU1 374 aa9.78□□□□□ -0.84
CPSF7-214ENST00000535222 CD320Q9NPF0 282 aa9.78□□□□□ -0.84
CPSF7-214ENST00000535222 COG5Q9UP83 839 aa9.78□□□□□ -0.84
CPSF7-214ENST00000535222 NUDCQ9Y266 331 aa9.78□□□□□ -0.84
CPSF7-214ENST00000535222 CRKP46108 304 aa9.77□□□□□ -0.85
CPSF7-214ENST00000535222 GCLCP48506 637 aaPredicted RBP9.77□□□□□ -0.85
CPSF7-214ENST00000535222 GREM2Q9H772 168 aa9.77□□□□□ -0.85
CPSF7-214ENST00000535222 SPINK5Q9NQ38 1064 aaPredicted RBP9.77□□□□□ -0.85
CPSF7-214ENST00000535222 TSPYL4Q9UJ04 414 aa9.77□□□□□ -0.85
CPSF7-214ENST00000535222 TTF2Q9UNY4 1162 aaKnown RBP9.77□□□□□ -0.85
CPSF7-214ENST00000535222 DAGLAQ9Y4D2 1042 aa9.77□□□□□ -0.85
CPSF7-214ENST00000535222 KIAA0355O15063 1070 aa9.76□□□□□ -0.85
CPSF7-214ENST00000535222 MIGA2Q7L4E1 593 aa9.76□□□□□ -0.85
CPSF7-214ENST00000535222 CHPF2Q9P2E5 772 aa9.76□□□□□ -0.85
CPSF7-214ENST00000535222 MORF4L1Q9UBU8 362 aa9.76□□□□□ -0.85
CPSF7-214ENST00000535222 AGTPBP1Q9UPW5 1226 aa9.76□□□□□ -0.85
CPSF7-214ENST00000535222 ATP11BQ9Y2G3 1177 aa9.76□□□□□ -0.85
CPSF7-214ENST00000535222 FAM186AA6NE01 2351 aa9.76□□□□□ -0.85
CPSF7-214ENST00000535222 MSCO60682 206 aa9.75□□□□□ -0.85
CPSF7-214ENST00000535222 PTPRAP18433 802 aa9.75□□□□□ -0.85
CPSF7-214ENST00000535222 IGFBP4P22692 258 aa9.75□□□□□ -0.85
CPSF7-214ENST00000535222 PBX2P40425 430 aa9.75□□□□□ -0.85
CPSF7-214ENST00000535222 MFSD14BQ5SR56 506 aa9.75□□□□□ -0.85
CPSF7-214ENST00000535222 ZNF804AQ7Z570 1209 aa9.75□□□□□ -0.85
CPSF7-214ENST00000535222 SOCS4Q8WXH5 440 aa9.75□□□□□ -0.85
CPSF7-214ENST00000535222 PHOX2BQ99453 314 aa9.75□□□□□ -0.85
CPSF7-214ENST00000535222 DBF4Q9UBU7 674 aaPredicted RBP9.75□□□□□ -0.85
CPSF7-214ENST00000535222 ZHX2Q9Y6X8 837 aa9.75□□□□□ -0.85
CPSF7-214ENST00000535222 AK9Q5TCS8 1911 aa9.75□□□□□ -0.85
CPSF7-214ENST00000535222 PHF20L1A8MW92 1017 aa9.74□□□□□ -0.85
CPSF7-214ENST00000535222 IGHA2P01877 340 aa9.74□□□□□ -0.85
CPSF7-214ENST00000535222 CYP2B6P20813 491 aa9.74□□□□□ -0.85
CPSF7-214ENST00000535222 IGHMBP2P38935 993 aaKnown RBP9.74□□□□□ -0.85
CPSF7-214ENST00000535222 CACNB3P54284 484 aa9.74□□□□□ -0.85
CPSF7-214ENST00000535222 CHRNDQ07001 517 aa9.74□□□□□ -0.85
CPSF7-214ENST00000535222 TDRD7Q8NHU6 1098 aaKnown RBP9.74□□□□□ -0.85
CPSF7-214ENST00000535222 ZDHHC15Q96MV8 337 aa9.74□□□□□ -0.85
CPSF7-214ENST00000535222 NUDT12Q9BQG2 462 aa9.74□□□□□ -0.85
CPSF7-214ENST00000535222 PRDM5Q9NQX1 630 aaPredicted RBP9.74□□□□□ -0.85
CPSF7-214ENST00000535222 HYPKQ9NX55 129 aa9.74□□□□□ -0.85
CPSF7-214ENST00000535222 CWC25Q9NXE8 425 aaPredicted RBP9.74□□□□□ -0.85
CPSF7-214ENST00000535222 PNMA3Q9UL41 463 aa9.74□□□□□ -0.85
CPSF7-214ENST00000535222 TACC3Q9Y6A5 838 aa9.74□□□□□ -0.85
CPSF7-214ENST00000535222 FRMPD3Q5JV73 1810 aa9.74□□□□□ -0.85
CPSF7-214ENST00000535222 PTPRFP10586 1907 aa9.74□□□□□ -0.85
CPSF7-214ENST00000535222 DLG5Q8TDM6 1919 aa9.74□□□□□ -0.85
CPSF7-214ENST00000535222 SNAP23O00161 211 aa9.73□□□□□ -0.85
CPSF7-214ENST00000535222 HOXB7P09629 217 aa9.73□□□□□ -0.85
CPSF7-214ENST00000535222 ALADP13716 330 aa9.73□□□□□ -0.85
CPSF7-214ENST00000535222 ZKSCAN1P17029 563 aaPredicted RBP9.73□□□□□ -0.85
CPSF7-214ENST00000535222 MAP3K10Q02779 954 aa9.73□□□□□ -0.85
CPSF7-214ENST00000535222 FPGSQ05932 587 aa9.73□□□□□ -0.85
CPSF7-214ENST00000535222 TRIM60Q495X7 471 aa9.73□□□□□ -0.85
CPSF7-214ENST00000535222 CC2D1BQ5T0F9 858 aaKnown RBP9.73□□□□□ -0.85
CPSF7-214ENST00000535222 APOBEC3HQ6NTF7 200 aaKnown RBP9.73□□□□□ -0.85
CPSF7-214ENST00000535222 FAM151AQ8WW52 585 aa9.73□□□□□ -0.85
CPSF7-214ENST00000535222 PLEKHF1Q96S99 279 aa9.73□□□□□ -0.85
CPSF7-214ENST00000535222 DDX20Q9UHI6 824 aaKnown RBP9.73□□□□□ -0.85
CPSF7-214ENST00000535222 ACACBO00763 2458 aa9.73□□□□□ -0.85
CPSF7-214ENST00000535222 PLXNA1Q9UIW2 1896 aa9.72□□□□□ -0.85
CPSF7-214ENST00000535222 GVINP1Q7Z2Y8 2422 aa9.72□□□□□ -0.85
CPSF7-214ENST00000535222 WDR87Q6ZQQ6 2873 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms