RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 DOCK1Q14185 1865 aa13.71□□□□□ -0.21
VAMP1-204ENST00000535180 PI4KAP2A4QPH2 592 aa13.7□□□□□ -0.22
VAMP1-204ENST00000535180 HIBADHP31937 336 aaKnown RBP13.7□□□□□ -0.22
VAMP1-204ENST00000535180 GRIN2CQ14957 1233 aa13.7□□□□□ -0.22
VAMP1-204ENST00000535180 NEUROD2Q15784 382 aa13.7□□□□□ -0.22
VAMP1-204ENST00000535180 LHX8Q68G74 356 aa13.7□□□□□ -0.22
VAMP1-204ENST00000535180 PI4KAP1Q8N8J0 262 aa13.7□□□□□ -0.22
VAMP1-204ENST00000535180 TRIM35Q9UPQ4 493 aa13.7□□□□□ -0.22
VAMP1-204ENST00000535180 PTPRAP18433 802 aa13.69□□□□□ -0.22
VAMP1-204ENST00000535180 GYG1P46976 350 aa13.69□□□□□ -0.22
VAMP1-204ENST00000535180 CASP7P55210 303 aa13.69□□□□□ -0.22
VAMP1-204ENST00000535180 FAM84BQ96KN1 310 aaPredicted RBP13.69□□□□□ -0.22
VAMP1-204ENST00000535180 MBIPQ9NS73 344 aa13.69□□□□□ -0.22
VAMP1-204ENST00000535180 THEGQ9P2T0 379 aa13.69□□□□□ -0.22
VAMP1-204ENST00000535180 MYH13Q9UKX3 1938 aa13.68□□□□□ -0.22
VAMP1-204ENST00000535180 PLIN1O60240 522 aa13.68□□□□□ -0.22
VAMP1-204ENST00000535180 MRPS5P82675 430 aaKnown RBP13.68□□□□□ -0.22
VAMP1-204ENST00000535180 IFIT5Q13325 482 aaKnown RBP13.68□□□□□ -0.22
VAMP1-204ENST00000535180 SCYL3Q8IZE3 742 aa13.68□□□□□ -0.22
VAMP1-204ENST00000535180 TBC1D22AQ8WUA7 517 aa13.68□□□□□ -0.22
VAMP1-204ENST00000535180 SENP6Q9GZR1 1112 aaPredicted RBP13.68□□□□□ -0.22
VAMP1-204ENST00000535180 PNMA3Q9UL41 463 aa13.68□□□□□ -0.22
VAMP1-204ENST00000535180 AGTPBP1Q9UPW5 1226 aa13.68□□□□□ -0.22
VAMP1-204ENST00000535180 LOC285556D6RIA3 1793 aa13.68□□□□□ -0.22
VAMP1-204ENST00000535180 ELL2O00472 640 aaPredicted RBP13.67□□□□□ -0.22
VAMP1-204ENST00000535180 XRCC5P13010 732 aaKnown RBP13.67□□□□□ -0.22
VAMP1-204ENST00000535180 CYP2B6P20813 491 aa13.67□□□□□ -0.22
VAMP1-204ENST00000535180 GCLCP48506 637 aaPredicted RBP13.67□□□□□ -0.22
VAMP1-204ENST00000535180 CACNB2Q08289 660 aaPredicted RBP13.67□□□□□ -0.22
VAMP1-204ENST00000535180 UBE4AQ14139 1066 aa13.67□□□□□ -0.22
VAMP1-204ENST00000535180 GCKRQ14397 625 aa13.67□□□□□ -0.22
VAMP1-204ENST00000535180 HHIPL2Q6UWX4 724 aa13.67□□□□□ -0.22
VAMP1-204ENST00000535180 LRFN3Q9BTN0 628 aa13.67□□□□□ -0.22
VAMP1-204ENST00000535180 PICK1Q9NRD5 415 aa13.67□□□□□ -0.22
VAMP1-204ENST00000535180 PHF20L1A8MW92 1017 aa13.66□□□□□ -0.22
VAMP1-204ENST00000535180 ALYREFQ86V81 257 aaKnown RBP13.66□□□□□ -0.22
VAMP1-204ENST00000535180 TRMT44Q8IYL2 757 aaKnown RBP13.66□□□□□ -0.22
VAMP1-204ENST00000535180 MAST3O60307 1309 aa13.65□□□□□ -0.22
VAMP1-204ENST00000535180 PLXNA1Q9UIW2 1896 aa13.65□□□□□ -0.22
VAMP1-204ENST00000535180 CCND3P30281 292 aaPredicted RBP13.65□□□□□ -0.22
VAMP1-204ENST00000535180 ATN1P54259 1190 aaPredicted RBP13.65□□□□□ -0.22
VAMP1-204ENST00000535180 RTP1P59025 263 aa13.65□□□□□ -0.22
VAMP1-204ENST00000535180 TCP10Q12799 353 aa13.65□□□□□ -0.22
VAMP1-204ENST00000535180 TREML2Q5T2D2 321 aa13.65□□□□□ -0.22
VAMP1-204ENST00000535180 CCDC30Q5VVM6 783 aa13.65□□□□□ -0.22
VAMP1-204ENST00000535180 IL27Q8NEV9 243 aa13.65□□□□□ -0.22
VAMP1-204ENST00000535180 PPM1EQ8WY54 764 aa13.65□□□□□ -0.22
VAMP1-204ENST00000535180 BADQ92934 168 aa13.65□□□□□ -0.22
VAMP1-204ENST00000535180 CHMP4AQ9BY43 222 aa13.65□□□□□ -0.22
VAMP1-204ENST00000535180 CHAF1AQ13111 956 aaPredicted RBP13.64□□□□□ -0.23
VAMP1-204ENST00000535180 PDE3AQ14432 1141 aa13.64□□□□□ -0.23
VAMP1-204ENST00000535180 AKNAD1Q5T1N1 836 aa13.64□□□□□ -0.23
VAMP1-204ENST00000535180 LDHAL6AQ6ZMR3 332 aa13.64□□□□□ -0.23
VAMP1-204ENST00000535180 NUDT12Q9BQG2 462 aa13.64□□□□□ -0.23
VAMP1-204ENST00000535180 IQSEC3Q9UPP2 1182 aaPredicted RBP13.64□□□□□ -0.23
VAMP1-204ENST00000535180 ATAD5Q96QE3 1844 aa13.64□□□□□ -0.23
VAMP1-204ENST00000535180 CACNA1FO60840 1977 aa13.63□□□□□ -0.23
VAMP1-204ENST00000535180 TRIM75PA6NK02 468 aa13.63□□□□□ -0.23
VAMP1-204ENST00000535180 ZNF853P0CG23 659 aa13.63□□□□□ -0.23
VAMP1-204ENST00000535180 ZKSCAN1P17029 563 aaPredicted RBP13.63□□□□□ -0.23
VAMP1-204ENST00000535180 FOXO4P98177 505 aa13.63□□□□□ -0.23
VAMP1-204ENST00000535180 FBXO33Q7Z6M2 555 aa13.63□□□□□ -0.23
VAMP1-204ENST00000535180 PROCA1Q8NCQ7 364 aaPredicted RBP13.63□□□□□ -0.23
VAMP1-204ENST00000535180 ZNF576Q9H609 170 aa13.63□□□□□ -0.23
VAMP1-204ENST00000535180 SPINK5Q9NQ38 1064 aaPredicted RBP13.63□□□□□ -0.23
VAMP1-204ENST00000535180 CNNM1Q9NRU3 951 aa13.63□□□□□ -0.23
VAMP1-204ENST00000535180 SUGT1Q9Y2Z0 365 aa13.63□□□□□ -0.23
VAMP1-204ENST00000535180 ATRNL1Q5VV63 1379 aa13.62□□□□□ -0.23
VAMP1-204ENST00000535180 NFIAQ12857 509 aa13.62□□□□□ -0.23
VAMP1-204ENST00000535180 POTEEQ6S8J3 1075 aa13.62□□□□□ -0.23
VAMP1-204ENST00000535180 SOCS4Q8WXH5 440 aa13.62□□□□□ -0.23
VAMP1-204ENST00000535180 ZNF594Q96JF6 807 aaPredicted RBP13.62□□□□□ -0.23
VAMP1-204ENST00000535180 GAS2L1Q99501 681 aaPredicted RBP13.62□□□□□ -0.23
VAMP1-204ENST00000535180 MYH16Q9H6N6 1097 aa13.62□□□□□ -0.23
VAMP1-204ENST00000535180 ATP11BQ9Y2G3 1177 aa13.62□□□□□ -0.23
VAMP1-204ENST00000535180 CHMP3Q9Y3E7 222 aa13.62□□□□□ -0.23
VAMP1-204ENST00000535180 CTNND1O60716 968 aaKnown RBP13.61□□□□□ -0.23
VAMP1-204ENST00000535180 FRAT2O75474 233 aaPredicted RBP13.61□□□□□ -0.23
VAMP1-204ENST00000535180 DNAJB2P25686 324 aa13.61□□□□□ -0.23
VAMP1-204ENST00000535180 CDC42EP5Q6NZY7 148 aa13.61□□□□□ -0.23
VAMP1-204ENST00000535180 VPS37DQ86XT2 251 aa13.61□□□□□ -0.23
VAMP1-204ENST00000535180 CCDC146Q8IYE0 955 aa13.61□□□□□ -0.23
VAMP1-204ENST00000535180 C8orf58Q8NAV2 365 aa13.61□□□□□ -0.23
VAMP1-204ENST00000535180 RNPC3Q96LT9 517 aaKnown RBP13.61□□□□□ -0.23
VAMP1-204ENST00000535180 NECAB3Q96P71 396 aaPredicted RBP13.61□□□□□ -0.23
VAMP1-204ENST00000535180 PRDM5Q9NQX1 630 aaPredicted RBP13.61□□□□□ -0.23
VAMP1-204ENST00000535180 MORF4L1Q9UBU8 362 aa13.61□□□□□ -0.23
VAMP1-204ENST00000535180 FAM198AQ9UFP1 575 aa13.61□□□□□ -0.23
VAMP1-204ENST00000535180 LRRFIP2Q9Y608 721 aaKnown RBP13.61□□□□□ -0.23
VAMP1-204ENST00000535180 REV3LO60673 3130 aa13.61□□□□□ -0.23
VAMP1-204ENST00000535180 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.6□□□□□ -0.23
VAMP1-204ENST00000535180 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.6□□□□□ -0.23
VAMP1-204ENST00000535180 DNM1LO00429 736 aa13.6□□□□□ -0.23
VAMP1-204ENST00000535180 MAP3K10Q02779 954 aa13.6□□□□□ -0.23
VAMP1-204ENST00000535180 PABPC4Q13310 644 aaKnown RBP eCLIP13.6□□□□□ -0.23
VAMP1-204ENST00000535180 CCDC57Q2TAC2 916 aa13.6□□□□□ -0.23
VAMP1-204ENST00000535180 TAF7LQ5H9L4 462 aa13.6□□□□□ -0.23
VAMP1-204ENST00000535180 TMEM31Q5JXX7 168 aa13.6□□□□□ -0.23
VAMP1-204ENST00000535180 USP6NLQ92738 828 aa13.6□□□□□ -0.23
VAMP1-204ENST00000535180 EPHX3Q9H6B9 360 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms