RNA–Protein interactions for RNA: ENST00000535021.5

LPCAT3-202, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-202ENST00000535021 PSMA5P28066 241 aa10.56□□□□□ -0.72
LPCAT3-202ENST00000535021 ZNF280AP59817 542 aaPredicted RBP10.56□□□□□ -0.72
LPCAT3-202ENST00000535021 ADCK5Q3MIX3 580 aa10.56□□□□□ -0.72
LPCAT3-202ENST00000535021 CFAP100Q494V2 611 aa10.56□□□□□ -0.72
LPCAT3-202ENST00000535021 SBK1Q52WX2 424 aa10.56□□□□□ -0.72
LPCAT3-202ENST00000535021 CDC42EP5Q6NZY7 148 aa10.56□□□□□ -0.72
LPCAT3-202ENST00000535021 MTMR14Q8NCE2 650 aa10.56□□□□□ -0.72
LPCAT3-202ENST00000535021 DPF2Q92785 391 aa10.56□□□□□ -0.72
LPCAT3-202ENST00000535021 DDRGK1Q96HY6 314 aa10.56□□□□□ -0.72
LPCAT3-202ENST00000535021 JAKMIP1Q96N16 626 aaKnown RBP10.56□□□□□ -0.72
LPCAT3-202ENST00000535021 NBPF3Q9H094 633 aa10.56□□□□□ -0.72
LPCAT3-202ENST00000535021 ZSWIM6Q9HCJ5 1215 aa10.56□□□□□ -0.72
LPCAT3-202ENST00000535021 ARPP21Q9UBL0 812 aaPredicted RBP10.56□□□□□ -0.72
LPCAT3-202ENST00000535021 ANAPC4Q9UJX5 808 aa10.56□□□□□ -0.72
LPCAT3-202ENST00000535021 MYH1P12882 1939 aa10.56□□□□□ -0.72
LPCAT3-202ENST00000535021 E7EWF7 191 aa10.55□□□□□ -0.72
LPCAT3-202ENST00000535021 WDHD1O75717 1129 aaPredicted RBP10.55□□□□□ -0.72
LPCAT3-202ENST00000535021 USP5P45974 858 aa10.55□□□□□ -0.72
LPCAT3-202ENST00000535021 GMPSP49915 693 aaPredicted RBP10.55□□□□□ -0.72
LPCAT3-202ENST00000535021 RBM5P52756 815 aaKnown RBP eCLIP10.55□□□□□ -0.72
LPCAT3-202ENST00000535021 HAND2P61296 217 aa10.55□□□□□ -0.72
LPCAT3-202ENST00000535021 PPARAQ07869 468 aa10.55□□□□□ -0.72
LPCAT3-202ENST00000535021 GPR162Q16538 588 aa10.55□□□□□ -0.72
LPCAT3-202ENST00000535021 CTR9Q6PD62 1173 aa10.55□□□□□ -0.72
LPCAT3-202ENST00000535021 TBC1D10CQ8IV04 446 aa10.55□□□□□ -0.72
LPCAT3-202ENST00000535021 OGFOD1Q8N543 542 aa10.55□□□□□ -0.72
LPCAT3-202ENST00000535021 TGFBRAP1Q8WUH2 860 aa10.55□□□□□ -0.72
LPCAT3-202ENST00000535021 SNX21Q969T3 373 aa10.55□□□□□ -0.72
LPCAT3-202ENST00000535021 ZBED3Q96IU2 234 aaPredicted RBP10.55□□□□□ -0.72
LPCAT3-202ENST00000535021 USP40Q9NVE5 1235 aa10.55□□□□□ -0.72
LPCAT3-202ENST00000535021 RNF181Q9P0P0 153 aa10.55□□□□□ -0.72
LPCAT3-202ENST00000535021 PCDHAC2Q9Y5I4 1007 aa10.55□□□□□ -0.72
LPCAT3-202ENST00000535021 FLT1P17948 1338 aa10.55□□□□□ -0.72
LPCAT3-202ENST00000535021 ROBO3Q96MS0 1386 aa10.54□□□□□ -0.72
LPCAT3-202ENST00000535021 USP17L12C9JPN9 530 aa10.54□□□□□ -0.72
LPCAT3-202ENST00000535021 USP17L21D6R901 530 aa10.54□□□□□ -0.72
LPCAT3-202ENST00000535021 ST18O60284 1047 aa10.54□□□□□ -0.72
LPCAT3-202ENST00000535021 CASTP20810 708 aaKnown RBP10.54□□□□□ -0.72
LPCAT3-202ENST00000535021 NEK4P51957 841 aa10.54□□□□□ -0.72
LPCAT3-202ENST00000535021 C9orf131Q5VYM1 1079 aa10.54□□□□□ -0.72
LPCAT3-202ENST00000535021 RUFY3Q7L099 469 aa10.54□□□□□ -0.72
LPCAT3-202ENST00000535021 MAPKAPK5Q8IW41 473 aa10.54□□□□□ -0.72
LPCAT3-202ENST00000535021 GPC2Q8N158 579 aa10.54□□□□□ -0.72
LPCAT3-202ENST00000535021 STAG1Q8WVM7 1258 aa10.54□□□□□ -0.72
LPCAT3-202ENST00000535021 PRMT6Q96LA8 375 aaPredicted RBP10.54□□□□□ -0.72
LPCAT3-202ENST00000535021 TTC14Q96N46 770 aa10.54□□□□□ -0.72
LPCAT3-202ENST00000535021 NEK1Q96PY6 1258 aa10.54□□□□□ -0.72
LPCAT3-202ENST00000535021 IDI2Q9BXS1 227 aa10.54□□□□□ -0.72
LPCAT3-202ENST00000535021 UPF3BQ9BZI7 483 aaKnown RBP10.54□□□□□ -0.72
LPCAT3-202ENST00000535021 CYP46A1Q9Y6A2 500 aa10.54□□□□□ -0.72
LPCAT3-202ENST00000535021 GJA3Q9Y6H8 435 aa10.54□□□□□ -0.72
LPCAT3-202ENST00000535021 GOLGB1Q14789 3259 aaKnown RBP10.54□□□□□ -0.72
LPCAT3-202ENST00000535021 ZC3H4Q9UPT8 1303 aaKnown RBP10.54□□□□□ -0.72
LPCAT3-202ENST00000535021 CD2BP2O95400 341 aaKnown RBP10.53□□□□□ -0.72
LPCAT3-202ENST00000535021 HMGB1P09429 215 aaKnown RBP10.53□□□□□ -0.72
LPCAT3-202ENST00000535021 FGRP09769 529 aa10.53□□□□□ -0.72
LPCAT3-202ENST00000535021 RPS6KB1P23443 525 aa10.53□□□□□ -0.72
LPCAT3-202ENST00000535021 CTDSPL2Q05D32 466 aa10.53□□□□□ -0.72
LPCAT3-202ENST00000535021 COL9A3Q14050 684 aaPredicted RBP10.53□□□□□ -0.72
LPCAT3-202ENST00000535021 DLGAP5Q15398 846 aa10.53□□□□□ -0.72
LPCAT3-202ENST00000535021 AKNAD1Q5T1N1 836 aa10.53□□□□□ -0.72
LPCAT3-202ENST00000535021 C12orf60Q5U649 245 aa10.53□□□□□ -0.72
LPCAT3-202ENST00000535021 BLOC1S2Q6QNY1 142 aa10.53□□□□□ -0.72
LPCAT3-202ENST00000535021 MB21D2Q8IYB1 491 aaPredicted RBP10.53□□□□□ -0.72
LPCAT3-202ENST00000535021 NCOA7Q8NI08 942 aa10.53□□□□□ -0.72
LPCAT3-202ENST00000535021 RNF41Q9H4P4 317 aaPredicted RBP10.53□□□□□ -0.72
LPCAT3-202ENST00000535021 MYOZ2Q9NPC6 264 aa10.53□□□□□ -0.72
LPCAT3-202ENST00000535021 DDX4Q9NQI0 724 aaKnown RBP10.53□□□□□ -0.72
LPCAT3-202ENST00000535021 MCM9Q9NXL9 1143 aa10.53□□□□□ -0.72
LPCAT3-202ENST00000535021 TACC3Q9Y6A5 838 aa10.53□□□□□ -0.72
LPCAT3-202ENST00000535021 COL2A1P02458 1487 aaPredicted RBP10.53□□□□□ -0.72
LPCAT3-202ENST00000535021 NEDD4P46934 1319 aa10.53□□□□□ -0.72
LPCAT3-202ENST00000535021 SIPA1L1O43166 1804 aa10.52□□□□□ -0.73
LPCAT3-202ENST00000535021 CYP2D7A0A087X1C5 515 aa10.52□□□□□ -0.73
LPCAT3-202ENST00000535021 SHTN1A0MZ66 631 aa10.52□□□□□ -0.73
LPCAT3-202ENST00000535021 MINDY4BA8MYZ0 360 aa10.52□□□□□ -0.73
LPCAT3-202ENST00000535021 SMIM22K7EJ46 135 aa10.52□□□□□ -0.73
LPCAT3-202ENST00000535021 CYP2D6P10635 497 aa10.52□□□□□ -0.73
LPCAT3-202ENST00000535021 PCP11498 1178 aaKnown RBP10.52□□□□□ -0.73
LPCAT3-202ENST00000535021 PRKAR2AP13861 404 aaKnown RBP10.52□□□□□ -0.73
LPCAT3-202ENST00000535021 CPA1P15085 419 aa10.52□□□□□ -0.73
LPCAT3-202ENST00000535021 NFIAQ12857 509 aa10.52□□□□□ -0.73
LPCAT3-202ENST00000535021 BECN1Q14457 450 aa10.52□□□□□ -0.73
LPCAT3-202ENST00000535021 MFSD6Q6ZSS7 791 aa10.52□□□□□ -0.73
LPCAT3-202ENST00000535021 MICALL2Q8IY33 904 aa10.52□□□□□ -0.73
LPCAT3-202ENST00000535021 AMOTL1Q8IY63 956 aa10.52□□□□□ -0.73
LPCAT3-202ENST00000535021 TBC1D2Q9BYX2 928 aa10.52□□□□□ -0.73
LPCAT3-202ENST00000535021 OSBPL5Q9H0X9 879 aaPredicted RBP10.52□□□□□ -0.73
LPCAT3-202ENST00000535021 ALDH8A1Q9H2A2 487 aaPredicted RBP10.52□□□□□ -0.73
LPCAT3-202ENST00000535021 TDRD3Q9H7E2 651 aaKnown RBP10.52□□□□□ -0.73
LPCAT3-202ENST00000535021 CNNM2Q9H8M5 875 aa10.52□□□□□ -0.73
LPCAT3-202ENST00000535021 FAM198AQ9UFP1 575 aa10.52□□□□□ -0.73
LPCAT3-202ENST00000535021 CNOT7Q9UIV1 285 aaKnown RBP10.52□□□□□ -0.73
LPCAT3-202ENST00000535021 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.52□□□□□ -0.73
LPCAT3-202ENST00000535021 WDR19Q8NEZ3 1342 aa10.52□□□□□ -0.73
LPCAT3-202ENST00000535021 WNT10BO00744 389 aa10.51□□□□□ -0.73
LPCAT3-202ENST00000535021 ENTPD3O75355 529 aa10.51□□□□□ -0.73
LPCAT3-202ENST00000535021 POLR3DP05423 398 aaPredicted RBP10.51□□□□□ -0.73
LPCAT3-202ENST00000535021 SLC3A2P08195 630 aaKnown RBP10.51□□□□□ -0.73
LPCAT3-202ENST00000535021 MCM2P49736 904 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms