RNA–Protein interactions for RNA: ENST00000534839.1

TNC-209, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-209ENST00000534839 DEFB129Q9H1M3 183 aa13.35□□□□□ -0.27
TNC-209ENST00000534839 TIMELESSQ9UNS1 1208 aa13.35□□□□□ -0.27
TNC-209ENST00000534839 CEMIPQ8WUJ3 1361 aa13.34□□□□□ -0.27
TNC-209ENST00000534839 TLL1O43897 1013 aa13.34□□□□□ -0.27
TNC-209ENST00000534839 USP2O75604 605 aaPredicted RBP13.34□□□□□ -0.27
TNC-209ENST00000534839 ANKRD13AQ8IZ07 590 aa13.34□□□□□ -0.27
TNC-209ENST00000534839 TBC1D2Q9BYX2 928 aa13.34□□□□□ -0.27
TNC-209ENST00000534839 USP17L3A6NCW0 530 aa13.33□□□□□ -0.28
TNC-209ENST00000534839 USP17L4A6NCW7 530 aa13.33□□□□□ -0.28
TNC-209ENST00000534839 FMNL1O95466 1100 aaPredicted RBP13.33□□□□□ -0.28
TNC-209ENST00000534839 NDUFV2P19404 249 aa13.33□□□□□ -0.28
TNC-209ENST00000534839 PRKCZQ05513 592 aa13.33□□□□□ -0.28
TNC-209ENST00000534839 USP17L1Q7RTZ2 530 aa13.33□□□□□ -0.28
TNC-209ENST00000534839 ASB2Q96Q27 587 aa13.33□□□□□ -0.28
TNC-209ENST00000534839 COL1A1P02452 1464 aaPredicted RBP13.33□□□□□ -0.28
TNC-209ENST00000534839 PIEZO1Q92508 2521 aa13.33□□□□□ -0.28
TNC-209ENST00000534839 MOXD2PA6NHM9 499 aa13.32□□□□□ -0.28
TNC-209ENST00000534839 IREB2P48200 963 aaKnown RBP13.32□□□□□ -0.28
TNC-209ENST00000534839 C17orf99Q6UX52 265 aa13.32□□□□□ -0.28
TNC-209ENST00000534839 OGFOD1Q8N543 542 aa13.32□□□□□ -0.28
TNC-209ENST00000534839 ATXN2LQ8WWM7 1075 aaKnown RBP13.32□□□□□ -0.28
TNC-209ENST00000534839 PAK6Q9NQU5 681 aaPredicted RBP13.32□□□□□ -0.28
TNC-209ENST00000534839 RRP7AQ9Y3A4 280 aaKnown RBP13.32□□□□□ -0.28
TNC-209ENST00000534839 NR1I2O75469 434 aa13.31□□□□□ -0.28
TNC-209ENST00000534839 WDHD1O75717 1129 aaPredicted RBP13.31□□□□□ -0.28
TNC-209ENST00000534839 INHAP05111 366 aa13.31□□□□□ -0.28
TNC-209ENST00000534839 GTF2A2P52657 109 aa13.31□□□□□ -0.28
TNC-209ENST00000534839 USP46P62068 366 aa13.31□□□□□ -0.28
TNC-209ENST00000534839 CPA4Q9UI42 421 aa13.31□□□□□ -0.28
TNC-209ENST00000534839 GABRQQ9UN88 632 aa13.31□□□□□ -0.28
TNC-209ENST00000534839 UFL1O94874 794 aa13.3□□□□□ -0.28
TNC-209ENST00000534839 MYL6BP14649 208 aa13.3□□□□□ -0.28
TNC-209ENST00000534839 NBPF12Q5TAG4 269 aaPredicted RBP13.3□□□□□ -0.28
TNC-209ENST00000534839 PODNQ7Z5L7 613 aa13.3□□□□□ -0.28
TNC-209ENST00000534839 HELBQ8NG08 1087 aaPredicted RBP13.3□□□□□ -0.28
TNC-209ENST00000534839 THAP11Q96EK4 314 aa13.3□□□□□ -0.28
TNC-209ENST00000534839 PCDHGC3Q9UN70 934 aa13.3□□□□□ -0.28
TNC-209ENST00000534839 ADGRA2Q96PE1 1338 aa13.3□□□□□ -0.28
TNC-209ENST00000534839 ELNP15502 786 aa13.29□□□□□ -0.28
TNC-209ENST00000534839 DACT2Q5SW24 774 aa13.29□□□□□ -0.28
TNC-209ENST00000534839 ANKLE1Q8NAG6 615 aa13.29□□□□□ -0.28
TNC-209ENST00000534839 ZBED3Q96IU2 234 aaPredicted RBP13.29□□□□□ -0.28
TNC-209ENST00000534839 NECAB3Q96P71 396 aaPredicted RBP13.29□□□□□ -0.28
TNC-209ENST00000534839 EPHX3Q9H6B9 360 aa13.29□□□□□ -0.28
TNC-209ENST00000534839 C11orf49Q9H6J7 331 aa13.29□□□□□ -0.28
TNC-209ENST00000534839 PODXL2Q9NZ53 605 aa13.29□□□□□ -0.28
TNC-209ENST00000534839 OTOFQ9HC10 1997 aa13.29□□□□□ -0.28
TNC-209ENST00000534839 BTBD19C9JJ37 291 aa13.28□□□□□ -0.28
TNC-209ENST00000534839 ADCY3O60266 1144 aa13.28□□□□□ -0.28
TNC-209ENST00000534839 SUPT20HL1Q3ZLR7 823 aa13.28□□□□□ -0.28
TNC-209ENST00000534839 RNF19BQ6ZMZ0 732 aa13.28□□□□□ -0.28
TNC-209ENST00000534839 GAS2L2Q8NHY3 880 aa13.28□□□□□ -0.28
TNC-209ENST00000534839 TMEM31Q5JXX7 168 aa13.27□□□□□ -0.29
TNC-209ENST00000534839 ZCCHC17Q9NP64 241 aaKnown RBP13.27□□□□□ -0.29
TNC-209ENST00000534839 PPP2R3BQ9Y5P8 575 aa13.27□□□□□ -0.29
TNC-209ENST00000534839 DDX60LQ5H9U9 1706 aaKnown RBP13.26□□□□□ -0.29
TNC-209ENST00000534839 MYSM1Q5VVJ2 828 aa13.26□□□□□ -0.29
TNC-209ENST00000534839 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.26□□□□□ -0.29
TNC-209ENST00000534839 MORC1Q86VD1 984 aa13.26□□□□□ -0.29
TNC-209ENST00000534839 THEGQ9P2T0 379 aa13.26□□□□□ -0.29
TNC-209ENST00000534839 GGA1Q9UJY5 639 aa13.26□□□□□ -0.29
TNC-209ENST00000534839 BDP1A6H8Y1 2624 aa13.26□□□□□ -0.29
TNC-209ENST00000534839 SH3TC1Q8TE82 1336 aa13.25□□□□□ -0.29
TNC-209ENST00000534839 MRPS5P82675 430 aaKnown RBP13.25□□□□□ -0.29
TNC-209ENST00000534839 BRICD5Q6PL45 260 aa13.25□□□□□ -0.29
TNC-209ENST00000534839 NLRP10Q86W26 655 aa13.25□□□□□ -0.29
TNC-209ENST00000534839 IL27Q8NEV9 243 aa13.25□□□□□ -0.29
TNC-209ENST00000534839 PPM1EQ8WY54 764 aa13.25□□□□□ -0.29
TNC-209ENST00000534839 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.25□□□□□ -0.29
TNC-209ENST00000534839 TRMT112Q9UI30 125 aaKnown RBP13.25□□□□□ -0.29
TNC-209ENST00000534839 ZNF804BA4D1E1 1349 aa13.24□□□□□ -0.29
TNC-209ENST00000534839 PFASO15067 1338 aa13.24□□□□□ -0.29
TNC-209ENST00000534839 FDX1P10109 184 aa13.24□□□□□ -0.29
TNC-209ENST00000534839 ZNF428Q96B54 188 aa13.24□□□□□ -0.29
TNC-209ENST00000534839 ANKIB1Q9P2G1 1089 aa13.24□□□□□ -0.29
TNC-209ENST00000534839 PCDHB15Q9Y5E8 787 aa13.24□□□□□ -0.29
TNC-209ENST00000534839 MYO3BQ8WXR4 1341 aa13.23□□□□□ -0.29
TNC-209ENST00000534839 CETPP11597 493 aa13.23□□□□□ -0.29
TNC-209ENST00000534839 FLT3LGP49771 235 aa13.23□□□□□ -0.29
TNC-209ENST00000534839 RPS8P62241 208 aaKnown RBP13.23□□□□□ -0.29
TNC-209ENST00000534839 SMAD3P84022 425 aaKnown RBP13.23□□□□□ -0.29
TNC-209ENST00000534839 VGLL4Q14135 290 aa13.23□□□□□ -0.29
TNC-209ENST00000534839 GRIN2CQ14957 1233 aa13.23□□□□□ -0.29
TNC-209ENST00000534839 SF3B3Q15393 1217 aaKnown RBP13.23□□□□□ -0.29
TNC-209ENST00000534839 SHHQ15465 462 aa13.23□□□□□ -0.29
TNC-209ENST00000534839 KIAA0825Q8IV33 1275 aa13.23□□□□□ -0.29
TNC-209ENST00000534839 FAM160A2Q8N612 972 aaPredicted RBP13.23□□□□□ -0.29
TNC-209ENST00000534839 SPSB2Q99619 263 aa13.23□□□□□ -0.29
TNC-209ENST00000534839 LIMD1Q9UGP4 676 aa13.23□□□□□ -0.29
TNC-209ENST00000534839 PCDHAC2Q9Y5I4 1007 aa13.23□□□□□ -0.29
TNC-209ENST00000534839 COL3A1P02461 1466 aaPredicted RBP13.23□□□□□ -0.29
TNC-209ENST00000534839 FCGRTP55899 365 aa13.22□□□□□ -0.29
TNC-209ENST00000534839 DDRGK1Q96HY6 314 aa13.22□□□□□ -0.29
TNC-209ENST00000534839 LBHD1Q9BQE6 289 aaPredicted RBP13.22□□□□□ -0.29
TNC-209ENST00000534839 C11orf16Q9NQ32 467 aa13.22□□□□□ -0.29
TNC-209ENST00000534839 MUC6Q6W4X9 2439 aa13.22□□□□□ -0.29
TNC-209ENST00000534839 CLRN2A0PK11 232 aa13.21□□□□□ -0.29
TNC-209ENST00000534839 SPTLC1O15269 473 aa13.21□□□□□ -0.29
TNC-209ENST00000534839 ADH1BP00325 375 aa13.21□□□□□ -0.29
TNC-209ENST00000534839 MMP14P50281 582 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms