RNA–Protein interactions for RNA: ENST00000534390.2

PAX6-230, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-230ENST00000534390 ADGRA1Q86SQ6 560 aa19.34■□□□□ 0.69
PAX6-230ENST00000534390 TNS4Q8IZW8 715 aa19.34■□□□□ 0.69
PAX6-230ENST00000534390 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.34■□□□□ 0.69
PAX6-230ENST00000534390 ZKSCAN4Q969J2 545 aaPredicted RBP19.34■□□□□ 0.69
PAX6-230ENST00000534390 BOLA2Q9H3K6 86 aa19.34■□□□□ 0.69
PAX6-230ENST00000534390 DCTPP1Q9H773 170 aa19.34■□□□□ 0.69
PAX6-230ENST00000534390 PRDM10Q9NQV6 1147 aa19.34■□□□□ 0.69
PAX6-230ENST00000534390 RNF186Q9NXI6 227 aa19.34■□□□□ 0.69
PAX6-230ENST00000534390 RFX7Q2KHR2 1363 aa19.33■□□□□ 0.69
PAX6-230ENST00000534390 ZBTB48P10074 688 aaPredicted RBP19.33■□□□□ 0.68
PAX6-230ENST00000534390 PLCG2P16885 1265 aa19.33■□□□□ 0.68
PAX6-230ENST00000534390 TTF1Q15361 905 aaPredicted RBP19.33■□□□□ 0.68
PAX6-230ENST00000534390 MIGA1Q8NAN2 632 aa19.33■□□□□ 0.68
PAX6-230ENST00000534390 OTUD5Q96G74 571 aa19.33■□□□□ 0.68
PAX6-230ENST00000534390 SUPT16HQ9Y5B9 1047 aaKnown RBP19.33■□□□□ 0.68
PAX6-230ENST00000534390 MANSC4A6NHS7 340 aaPredicted RBP19.32■□□□□ 0.68
PAX6-230ENST00000534390 CNKSR2Q8WXI2 1034 aa19.32■□□□□ 0.68
PAX6-230ENST00000534390 ZBTB47Q9UFB7 747 aaPredicted RBP19.32■□□□□ 0.68
PAX6-230ENST00000534390 DDTLA6NHG4 134 aaPredicted RBP19.31■□□□□ 0.68
PAX6-230ENST00000534390 MAP4K4O95819 1239 aaPredicted RBP19.31■□□□□ 0.68
PAX6-230ENST00000534390 INPP5BP32019 993 aa19.31■□□□□ 0.68
PAX6-230ENST00000534390 GJA5P36382 358 aa19.31■□□□□ 0.68
PAX6-230ENST00000534390 DYNLL1P63167 89 aaKnown RBP19.31■□□□□ 0.68
PAX6-230ENST00000534390 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.31■□□□□ 0.68
PAX6-230ENST00000534390 EDC3Q96F86 508 aaKnown RBP19.31■□□□□ 0.68
PAX6-230ENST00000534390 GPATCH3Q96I76 525 aa19.31■□□□□ 0.68
PAX6-230ENST00000534390 PAG1Q9NWQ8 432 aa19.31■□□□□ 0.68
PAX6-230ENST00000534390 SAGE1Q9NXZ1 904 aa19.31■□□□□ 0.68
PAX6-230ENST00000534390 SNCAIPQ9Y6H5 919 aa19.31■□□□□ 0.68
PAX6-230ENST00000534390 ATP5JP18859 108 aa19.3■□□□□ 0.68
PAX6-230ENST00000534390 SH3BP5LQ7L8J4 393 aa19.3■□□□□ 0.68
PAX6-230ENST00000534390 MAPKAPK5Q8IW41 473 aa19.3■□□□□ 0.68
PAX6-230ENST00000534390 TGFBRAP1Q8WUH2 860 aa19.3■□□□□ 0.68
PAX6-230ENST00000534390 OSBPL5Q9H0X9 879 aaPredicted RBP19.3■□□□□ 0.68
PAX6-230ENST00000534390 TM4SF4P48230 202 aa19.29■□□□□ 0.68
PAX6-230ENST00000534390 SLC9C2Q5TAH2 1124 aa19.29■□□□□ 0.68
PAX6-230ENST00000534390 TSHZ3Q63HK5 1081 aa19.29■□□□□ 0.68
PAX6-230ENST00000534390 IGSF3O75054 1194 aa19.28■□□□□ 0.68
PAX6-230ENST00000534390 TBC1D8O95759 1140 aa19.28■□□□□ 0.68
PAX6-230ENST00000534390 SLURP2P0DP57 97 aa19.28■□□□□ 0.68
PAX6-230ENST00000534390 PDE6AP16499 860 aa19.28■□□□□ 0.68
PAX6-230ENST00000534390 SLC4A8Q2Y0W8 1093 aa19.28■□□□□ 0.68
PAX6-230ENST00000534390 ERO1BQ86YB8 467 aa19.28■□□□□ 0.68
PAX6-230ENST00000534390 EXOC6Q8TAG9 804 aa19.28■□□□□ 0.68
PAX6-230ENST00000534390 HAUS7Q99871 368 aa19.28■□□□□ 0.68
PAX6-230ENST00000534390 ECHDC1Q9NTX5 307 aa19.28■□□□□ 0.68
PAX6-230ENST00000534390 SAP30BPQ9UHR5 308 aaKnown RBP19.28■□□□□ 0.68
PAX6-230ENST00000534390 FLT1P17948 1338 aa19.27■□□□□ 0.68
PAX6-230ENST00000534390 CDK5RAP2Q96SN8 1893 aa19.27■□□□□ 0.68
PAX6-230ENST00000534390 CASP8AP2Q9UKL3 1982 aa19.27■□□□□ 0.68
PAX6-230ENST00000534390 SPDYE5A6NIY4 337 aa19.27■□□□□ 0.68
PAX6-230ENST00000534390 FAM196BA6NMK8 535 aa19.27■□□□□ 0.68
PAX6-230ENST00000534390 USP5P45974 858 aa19.27■□□□□ 0.68
PAX6-230ENST00000534390 PPP4CP60510 307 aa19.27■□□□□ 0.68
PAX6-230ENST00000534390 IFNL1Q8IU54 200 aa19.27■□□□□ 0.68
PAX6-230ENST00000534390 TRIM34Q9BYJ4 488 aa19.27■□□□□ 0.68
PAX6-230ENST00000534390 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.27■□□□□ 0.68
PAX6-230ENST00000534390 PICK1Q9NRD5 415 aa19.27■□□□□ 0.68
PAX6-230ENST00000534390 ATRNL1Q5VV63 1379 aa19.27■□□□□ 0.68
PAX6-230ENST00000534390 ZNF532Q9HCE3 1301 aa19.26■□□□□ 0.67
PAX6-230ENST00000534390 CCL15-CCL14A0A0B4J2E2 113 aa19.26■□□□□ 0.67
PAX6-230ENST00000534390 MAGEB6P1A0A0J9YX57 407 aa19.26■□□□□ 0.67
PAX6-230ENST00000534390 NPM3O75607 178 aaKnown RBP19.26■□□□□ 0.67
PAX6-230ENST00000534390 GTF2A2P52657 109 aa19.26■□□□□ 0.67
PAX6-230ENST00000534390 INHBEP58166 350 aa19.26■□□□□ 0.67
PAX6-230ENST00000534390 IRX6P78412 446 aaPredicted RBP19.26■□□□□ 0.67
PAX6-230ENST00000534390 CCL15Q16663 113 aa19.26■□□□□ 0.67
PAX6-230ENST00000534390 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.26■□□□□ 0.67
PAX6-230ENST00000534390 IGF2BP3O00425 579 aaKnown RBP eCLIP19.25■□□□□ 0.67
PAX6-230ENST00000534390 ANKRD45Q5TZF3 282 aa19.25■□□□□ 0.67
PAX6-230ENST00000534390 OTUD7BQ6GQQ9 843 aa19.25■□□□□ 0.67
PAX6-230ENST00000534390 CERS3Q8IU89 383 aa19.25■□□□□ 0.67
PAX6-230ENST00000534390 ZNF112Q9UJU3 913 aa19.25■□□□□ 0.67
PAX6-230ENST00000534390 FOCADQ5VW36 1801 aa19.25■□□□□ 0.67
PAX6-230ENST00000534390 COL2A1P02458 1487 aaPredicted RBP19.24■□□□□ 0.67
PAX6-230ENST00000534390 ALDH1A1P00352 501 aa19.24■□□□□ 0.67
PAX6-230ENST00000534390 PPIL2Q13356 520 aa19.24■□□□□ 0.67
PAX6-230ENST00000534390 SNAPC2Q13487 334 aa19.24■□□□□ 0.67
PAX6-230ENST00000534390 CRACR2BQ8N4Y2 399 aaPredicted RBP19.24■□□□□ 0.67
PAX6-230ENST00000534390 PALD1Q9ULE6 856 aa19.24■□□□□ 0.67
PAX6-230ENST00000534390 PHF20L1A8MW92 1017 aa19.23■□□□□ 0.67
PAX6-230ENST00000534390 IRF6O14896 467 aa19.23■□□□□ 0.67
PAX6-230ENST00000534390 CAPN15O75808 1086 aa19.23■□□□□ 0.67
PAX6-230ENST00000534390 HLA-DOAP06340 250 aa19.23■□□□□ 0.67
PAX6-230ENST00000534390 PPATQ06203 517 aa19.23■□□□□ 0.67
PAX6-230ENST00000534390 HDAC1Q13547 482 aaPredicted RBP19.23■□□□□ 0.67
PAX6-230ENST00000534390 AAMPQ13685 434 aa19.23■□□□□ 0.67
PAX6-230ENST00000534390 NOL9Q5SY16 702 aaKnown RBP19.23■□□□□ 0.67
PAX6-230ENST00000534390 TMED8Q6PL24 325 aaPredicted RBP19.23■□□□□ 0.67
PAX6-230ENST00000534390 SCYL3Q8IZE3 742 aa19.23■□□□□ 0.67
PAX6-230ENST00000534390 OTUD7AQ8TE49 926 aaPredicted RBP19.23■□□□□ 0.67
PAX6-230ENST00000534390 BRI3BPQ8WY22 251 aa19.23■□□□□ 0.67
PAX6-230ENST00000534390 DHX36Q9H2U1 1008 aaKnown RBP19.23■□□□□ 0.67
PAX6-230ENST00000534390 LAMB1P07942 1786 aa19.23■□□□□ 0.67
PAX6-230ENST00000534390 DOCK1Q14185 1865 aa19.22■□□□□ 0.67
PAX6-230ENST00000534390 MYH7P12883 1935 aa19.22■□□□□ 0.67
PAX6-230ENST00000534390 CETPP11597 493 aa19.22■□□□□ 0.67
PAX6-230ENST00000534390 SLFNL1Q499Z3 407 aa19.22■□□□□ 0.67
PAX6-230ENST00000534390 GCC1Q96CN9 775 aa19.22■□□□□ 0.67
PAX6-230ENST00000534390 MS4A4AQ96JQ5 239 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms