RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 OTOP1Q7RTM1 612 aa16.45■□□□□ 0.22
CAPN1-228ENST00000534373 FAM43AQ8N2R8 423 aa16.45■□□□□ 0.22
CAPN1-228ENST00000534373 ZNF384Q8TF68 577 aa16.45■□□□□ 0.22
CAPN1-228ENST00000534373 C1orf115Q9H7X2 142 aa16.45■□□□□ 0.22
CAPN1-228ENST00000534373 LRP2BPQ9P2M1 347 aa16.45■□□□□ 0.22
CAPN1-228ENST00000534373 KCNH4Q9UQ05 1017 aa16.45■□□□□ 0.22
CAPN1-228ENST00000534373 TRIM17Q9Y577 477 aa16.45■□□□□ 0.22
CAPN1-228ENST00000534373 RFX7Q2KHR2 1363 aa16.45■□□□□ 0.22
CAPN1-228ENST00000534373 PHF20L1A8MW92 1017 aa16.44■□□□□ 0.22
CAPN1-228ENST00000534373 CEP85Q6P2H3 762 aa16.44■□□□□ 0.22
CAPN1-228ENST00000534373 PI16Q6UXB8 463 aa16.44■□□□□ 0.22
CAPN1-228ENST00000534373 TBC1D9Q6ZT07 1266 aa16.44■□□□□ 0.22
CAPN1-228ENST00000534373 ZSCAN29Q8IWY8 852 aaPredicted RBP16.44■□□□□ 0.22
CAPN1-228ENST00000534373 RAI14Q9P0K7 980 aa16.44■□□□□ 0.22
CAPN1-228ENST00000534373 AK9Q5TCS8 1911 aa16.44■□□□□ 0.22
CAPN1-228ENST00000534373 ATRNL1Q5VV63 1379 aa16.43■□□□□ 0.22
CAPN1-228ENST00000534373 BTBD19C9JJ37 291 aa16.43■□□□□ 0.22
CAPN1-228ENST00000534373 CXCL11O14625 94 aa16.43■□□□□ 0.22
CAPN1-228ENST00000534373 TBC1D12O60347 775 aa16.43■□□□□ 0.22
CAPN1-228ENST00000534373 TLR2O60603 784 aa16.43■□□□□ 0.22
CAPN1-228ENST00000534373 HSP90AB4PQ58FF6 505 aa16.43■□□□□ 0.22
CAPN1-228ENST00000534373 SH3BP5LQ7L8J4 393 aa16.43■□□□□ 0.22
CAPN1-228ENST00000534373 ERC1Q8IUD2 1116 aa16.43■□□□□ 0.22
CAPN1-228ENST00000534373 PANK1Q8TE04 598 aa16.43■□□□□ 0.22
CAPN1-228ENST00000534373 DBNDD2Q9BQY9 259 aa16.43■□□□□ 0.22
CAPN1-228ENST00000534373 CHMP4BQ9H444 224 aaKnown RBP16.43■□□□□ 0.22
CAPN1-228ENST00000534373 EFCC1Q9HA90 598 aa16.43■□□□□ 0.22
CAPN1-228ENST00000534373 DDTLA6NHG4 134 aaPredicted RBP16.42■□□□□ 0.22
CAPN1-228ENST00000534373 CTNND1O60716 968 aaKnown RBP16.42■□□□□ 0.22
CAPN1-228ENST00000534373 BAG3O95817 575 aa16.42■□□□□ 0.22
CAPN1-228ENST00000534373 ANKRD23Q86SG2 305 aa16.42■□□□□ 0.22
CAPN1-228ENST00000534373 SCYL3Q8IZE3 742 aa16.42■□□□□ 0.22
CAPN1-228ENST00000534373 CD99L2Q8TCZ2 262 aa16.42■□□□□ 0.22
CAPN1-228ENST00000534373 DDX4Q9NQI0 724 aaKnown RBP16.42■□□□□ 0.22
CAPN1-228ENST00000534373 PTPN22Q9Y2R2 807 aa16.42■□□□□ 0.22
CAPN1-228ENST00000534373 PLCG2P16885 1265 aa16.41■□□□□ 0.22
CAPN1-228ENST00000534373 PPP4CP60510 307 aa16.41■□□□□ 0.22
CAPN1-228ENST00000534373 PICALMQ13492 652 aa16.41■□□□□ 0.22
CAPN1-228ENST00000534373 TMED8Q6PL24 325 aaPredicted RBP16.41■□□□□ 0.22
CAPN1-228ENST00000534373 RPAP2Q8IXW5 612 aaPredicted RBP16.41■□□□□ 0.22
CAPN1-228ENST00000534373 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.41■□□□□ 0.22
CAPN1-228ENST00000534373 NOL10Q9BSC4 688 aaKnown RBP16.41■□□□□ 0.22
CAPN1-228ENST00000534373 PICK1Q9NRD5 415 aa16.41■□□□□ 0.22
CAPN1-228ENST00000534373 DDX19BQ9UMR2 479 aa16.41■□□□□ 0.22
CAPN1-228ENST00000534373 CYP2E1P05181 493 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-228ENST00000534373 SOX10P56693 466 aa16.4■□□□□ 0.22
CAPN1-228ENST00000534373 NAA16Q6N069 864 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-228ENST00000534373 EAF2Q96CJ1 260 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-228ENST00000534373 DBNLQ9UJU6 430 aaKnown RBP16.4■□□□□ 0.22
CAPN1-228ENST00000534373 COL2A1P02458 1487 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-228ENST00000534373 GNRH1P01148 92 aa16.39■□□□□ 0.21
CAPN1-228ENST00000534373 PTPRAP18433 802 aa16.39■□□□□ 0.21
CAPN1-228ENST00000534373 KIF22Q14807 665 aa16.39■□□□□ 0.21
CAPN1-228ENST00000534373 FASTKD5Q7L8L6 764 aaKnown RBP16.39■□□□□ 0.21
CAPN1-228ENST00000534373 CCDC8Q9H0W5 538 aaPredicted RBP16.39■□□□□ 0.21
CAPN1-228ENST00000534373 OSBPL5Q9H0X9 879 aaPredicted RBP16.39■□□□□ 0.21
CAPN1-228ENST00000534373 DHX36Q9H2U1 1008 aaKnown RBP16.39■□□□□ 0.21
CAPN1-228ENST00000534373 SNRKQ9NRH2 765 aa16.39■□□□□ 0.21
CAPN1-228ENST00000534373 RCAN3Q9UKA8 241 aa16.39■□□□□ 0.21
CAPN1-228ENST00000534373 ZHX2Q9Y6X8 837 aa16.39■□□□□ 0.21
CAPN1-228ENST00000534373 PDHXO00330 501 aa16.38■□□□□ 0.21
CAPN1-228ENST00000534373 HMMRO75330 724 aa16.38■□□□□ 0.21
CAPN1-228ENST00000534373 ZAP70P43403 619 aa16.38■□□□□ 0.21
CAPN1-228ENST00000534373 MOGSQ13724 837 aa16.38■□□□□ 0.21
CAPN1-228ENST00000534373 C17orf99Q6UX52 265 aa16.38■□□□□ 0.21
CAPN1-228ENST00000534373 CERS3Q8IU89 383 aa16.38■□□□□ 0.21
CAPN1-228ENST00000534373 TEX11Q8IYF3 940 aa16.38■□□□□ 0.21
CAPN1-228ENST00000534373 ZBTB40Q9NUA8 1239 aa16.38■□□□□ 0.21
CAPN1-228ENST00000534373 AFG3L2Q9Y4W6 797 aa16.38■□□□□ 0.21
CAPN1-228ENST00000534373 A0A0G2JLL6 359 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-228ENST00000534373 LACTBP83111 547 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-228ENST00000534373 PRRT2Q7Z6L0 340 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-228ENST00000534373 TBC1D2Q9BYX2 928 aa16.37■□□□□ 0.21
CAPN1-228ENST00000534373 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.37■□□□□ 0.21
CAPN1-228ENST00000534373 PI4KBQ9UBF8 816 aa16.37■□□□□ 0.21
CAPN1-228ENST00000534373 HERC5Q9UII4 1024 aaKnown RBP16.37■□□□□ 0.21
CAPN1-228ENST00000534373 EXOC6BQ9Y2D4 811 aa16.37■□□□□ 0.21
CAPN1-228ENST00000534373 SLC45A1Q9Y2W3 748 aa16.37■□□□□ 0.21
CAPN1-228ENST00000534373 DOCK2Q92608 1830 aa16.37■□□□□ 0.21
CAPN1-228ENST00000534373 PRMT2P55345 433 aa16.36■□□□□ 0.21
CAPN1-228ENST00000534373 RHPN1Q8TCX5 695 aa16.36■□□□□ 0.21
CAPN1-228ENST00000534373 SH3RF3Q8TEJ3 882 aaPredicted RBP16.36■□□□□ 0.21
CAPN1-228ENST00000534373 ARMC5Q96C12 935 aa16.36■□□□□ 0.21
CAPN1-228ENST00000534373 AATFQ9NY61 560 aaKnown RBP eCLIP16.36■□□□□ 0.216e-6■■■■■ 54.7
CAPN1-228ENST00000534373 TLR7Q9NYK1 1049 aaKnown RBP16.36■□□□□ 0.21
CAPN1-228ENST00000534373 COG6Q9Y2V7 657 aa16.36■□□□□ 0.21
CAPN1-228ENST00000534373 RAB11FIP3O75154 756 aa16.35■□□□□ 0.21
CAPN1-228ENST00000534373 CAP1Q01518 475 aa16.35■□□□□ 0.21
CAPN1-228ENST00000534373 PDE3AQ14432 1141 aa16.35■□□□□ 0.21
CAPN1-228ENST00000534373 GPAT2Q6NUI2 795 aa16.35■□□□□ 0.21
CAPN1-228ENST00000534373 NBPF11Q86T75 865 aa16.35■□□□□ 0.21
CAPN1-228ENST00000534373 AACSQ86V21 672 aa16.35■□□□□ 0.21
CAPN1-228ENST00000534373 FOXP4Q8IVH2 680 aaPredicted RBP16.35■□□□□ 0.21
CAPN1-228ENST00000534373 CLASRPQ8N2M8 674 aaKnown RBP16.35■□□□□ 0.21
CAPN1-228ENST00000534373 KIF1BPQ96EK5 621 aa16.35■□□□□ 0.21
CAPN1-228ENST00000534373 PARK7Q99497 189 aaKnown RBP16.35■□□□□ 0.21
CAPN1-228ENST00000534373 CAP2P40123 477 aa16.34■□□□□ 0.21
CAPN1-228ENST00000534373 MAP3K12Q12852 859 aa16.34■□□□□ 0.21
CAPN1-228ENST00000534373 METTL16Q86W50 562 aaKnown RBP16.34■□□□□ 0.21
CAPN1-228ENST00000534373 PIH1D3Q9NQM4 214 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms