RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 FXR1P51114 621 aaKnown RBP eCLIP17.28■□□□□ 0.36
SF3B2-215ENST00000534307 RHBDL3P58872 404 aa17.28■□□□□ 0.36
SF3B2-215ENST00000534307 SH3BP5LQ7L8J4 393 aa17.28■□□□□ 0.36
SF3B2-215ENST00000534307 EAF2Q96CJ1 260 aaPredicted RBP17.28■□□□□ 0.36
SF3B2-215ENST00000534307 ZBTB40Q9NUA8 1239 aa17.28■□□□□ 0.36
SF3B2-215ENST00000534307 COG6Q9Y2V7 657 aa17.28■□□□□ 0.36
SF3B2-215ENST00000534307 FKTNO75072 461 aa17.27■□□□□ 0.36
SF3B2-215ENST00000534307 RGS3P49796 1198 aa17.27■□□□□ 0.36
SF3B2-215ENST00000534307 MIGA2Q7L4E1 593 aa17.27■□□□□ 0.36
SF3B2-215ENST00000534307 SIRT2Q8IXJ6 389 aa17.27■□□□□ 0.36
SF3B2-215ENST00000534307 BRI3BPQ8WY22 251 aa17.27■□□□□ 0.36
SF3B2-215ENST00000534307 OTUD5Q96G74 571 aa17.27■□□□□ 0.36
SF3B2-215ENST00000534307 ZNF341Q9BYN7 854 aa17.27■□□□□ 0.36
SF3B2-215ENST00000534307 DDX4Q9NQI0 724 aaKnown RBP17.27■□□□□ 0.36
SF3B2-215ENST00000534307 TLR7Q9NYK1 1049 aaKnown RBP17.27■□□□□ 0.36
SF3B2-215ENST00000534307 DDX19BQ9UMR2 479 aa17.27■□□□□ 0.36
SF3B2-215ENST00000534307 AK9Q5TCS8 1911 aa17.27■□□□□ 0.35
SF3B2-215ENST00000534307 INPP5BP32019 993 aa17.26■□□□□ 0.35
SF3B2-215ENST00000534307 TTC39AQ5SRH9 613 aa17.26■□□□□ 0.35
SF3B2-215ENST00000534307 ERO1BQ86YB8 467 aa17.26■□□□□ 0.35
SF3B2-215ENST00000534307 EXOC6BQ9Y2D4 811 aa17.26■□□□□ 0.35
SF3B2-215ENST00000534307 MYO5AQ9Y4I1 1855 aaKnown RBP17.26■□□□□ 0.35
SF3B2-215ENST00000534307 NPM3O75607 178 aaKnown RBP17.25■□□□□ 0.35
SF3B2-215ENST00000534307 CYP2E1P05181 493 aaPredicted RBP17.25■□□□□ 0.35
SF3B2-215ENST00000534307 GTF2A2P52657 109 aa17.25■□□□□ 0.35
SF3B2-215ENST00000534307 GSTO1P78417 241 aa17.25■□□□□ 0.35
SF3B2-215ENST00000534307 MAP3K10Q02779 954 aa17.25■□□□□ 0.35
SF3B2-215ENST00000534307 CCDC158Q5M9N0 1113 aa17.25■□□□□ 0.35
SF3B2-215ENST00000534307 C20orf194Q5TEA3 1177 aa17.25■□□□□ 0.35
SF3B2-215ENST00000534307 ERC1Q8IUD2 1116 aa17.25■□□□□ 0.35
SF3B2-215ENST00000534307 RPAP2Q8IXW5 612 aaPredicted RBP17.25■□□□□ 0.35
SF3B2-215ENST00000534307 SNRKQ9NRH2 765 aa17.25■□□□□ 0.35
SF3B2-215ENST00000534307 COL2A1P02458 1487 aaPredicted RBP17.24■□□□□ 0.35
SF3B2-215ENST00000534307 PHF20L1A8MW92 1017 aa17.24■□□□□ 0.35
SF3B2-215ENST00000534307 IRF6O14896 467 aa17.24■□□□□ 0.35
SF3B2-215ENST00000534307 MAP4K4O95819 1239 aaPredicted RBP17.24■□□□□ 0.35
SF3B2-215ENST00000534307 LDHCP07864 332 aa17.24■□□□□ 0.35
SF3B2-215ENST00000534307 CRHR2Q13324 411 aa17.24■□□□□ 0.35
SF3B2-215ENST00000534307 PPIL2Q13356 520 aa17.24■□□□□ 0.35
SF3B2-215ENST00000534307 NOL9Q5SY16 702 aaKnown RBP17.24■□□□□ 0.35
SF3B2-215ENST00000534307 CCDC8Q9H0W5 538 aaPredicted RBP17.24■□□□□ 0.35
SF3B2-215ENST00000534307 RAI14Q9P0K7 980 aa17.24■□□□□ 0.35
SF3B2-215ENST00000534307 CCL15-CCL14A0A0B4J2E2 113 aa17.23■□□□□ 0.35
SF3B2-215ENST00000534307 DDTLA6NHG4 134 aaPredicted RBP17.23■□□□□ 0.35
SF3B2-215ENST00000534307 ZAP70P43403 619 aa17.23■□□□□ 0.35
SF3B2-215ENST00000534307 PPATQ06203 517 aa17.23■□□□□ 0.35
SF3B2-215ENST00000534307 PDE3AQ14432 1141 aa17.23■□□□□ 0.35
SF3B2-215ENST00000534307 CCL15Q16663 113 aa17.23■□□□□ 0.35
SF3B2-215ENST00000534307 OTUD7BQ6GQQ9 843 aa17.23■□□□□ 0.35
SF3B2-215ENST00000534307 LRP2BPQ9P2M1 347 aa17.23■□□□□ 0.35
SF3B2-215ENST00000534307 LAMA3Q16787 3333 aa17.22■□□□□ 0.35
SF3B2-215ENST00000534307 IGSF3O75054 1194 aa17.22■□□□□ 0.35
SF3B2-215ENST00000534307 PICALMQ13492 652 aa17.22■□□□□ 0.35
SF3B2-215ENST00000534307 HSP90AB4PQ58FF6 505 aa17.22■□□□□ 0.35
SF3B2-215ENST00000534307 OTOP1Q7RTM1 612 aa17.22■□□□□ 0.35
SF3B2-215ENST00000534307 RHPN1Q8TCX5 695 aa17.22■□□□□ 0.35
SF3B2-215ENST00000534307 PIH1D3Q9NQM4 214 aaKnown RBP17.22■□□□□ 0.35
SF3B2-215ENST00000534307 TRIM17Q9Y577 477 aa17.22■□□□□ 0.35
SF3B2-215ENST00000534307 CDK5RAP2Q96SN8 1893 aa17.22■□□□□ 0.35
SF3B2-215ENST00000534307 FOCADQ5VW36 1801 aa17.21■□□□□ 0.35
SF3B2-215ENST00000534307 CUL9Q8IWT3 2517 aa17.21■□□□□ 0.35
SF3B2-215ENST00000534307 CETPP11597 493 aa17.21■□□□□ 0.35
SF3B2-215ENST00000534307 SNAPC2Q13487 334 aa17.21■□□□□ 0.35
SF3B2-215ENST00000534307 ADGRA1Q86SQ6 560 aa17.21■□□□□ 0.35
SF3B2-215ENST00000534307 FAM43AQ8N2R8 423 aa17.21■□□□□ 0.35
SF3B2-215ENST00000534307 KCNH4Q9UQ05 1017 aa17.21■□□□□ 0.35
SF3B2-215ENST00000534307 SLURP2P0DP57 97 aa17.2■□□□□ 0.34
SF3B2-215ENST00000534307 PPP4CP60510 307 aa17.2■□□□□ 0.34
SF3B2-215ENST00000534307 NAA16Q6N069 864 aaPredicted RBP17.2■□□□□ 0.34
SF3B2-215ENST00000534307 AACSQ86V21 672 aa17.2■□□□□ 0.34
SF3B2-215ENST00000534307 OSBPL5Q9H0X9 879 aaPredicted RBP17.2■□□□□ 0.34
SF3B2-215ENST00000534307 CHMP4BQ9H444 224 aaKnown RBP17.2■□□□□ 0.34
SF3B2-215ENST00000534307 ZCCHC17Q9NP64 241 aaKnown RBP17.2■□□□□ 0.34
SF3B2-215ENST00000534307 DOCK1Q14185 1865 aa17.2■□□□□ 0.34
SF3B2-215ENST00000534307 SIPA1L1O43166 1804 aa17.19■□□□□ 0.34
SF3B2-215ENST00000534307 PHIPQ8WWQ0 1821 aa17.19■□□□□ 0.34
SF3B2-215ENST00000534307 BTBD19C9JJ37 291 aa17.19■□□□□ 0.34
SF3B2-215ENST00000534307 HMMRO75330 724 aa17.19■□□□□ 0.34
SF3B2-215ENST00000534307 CAP1Q01518 475 aa17.19■□□□□ 0.34
SF3B2-215ENST00000534307 MOGSQ13724 837 aa17.19■□□□□ 0.34
SF3B2-215ENST00000534307 ZSCAN29Q8IWY8 852 aaPredicted RBP17.19■□□□□ 0.34
SF3B2-215ENST00000534307 SH3RF3Q8TEJ3 882 aaPredicted RBP17.19■□□□□ 0.34
SF3B2-215ENST00000534307 IL1RAPL2Q9NP60 686 aa17.19■□□□□ 0.34
SF3B2-215ENST00000534307 TBC1D12O60347 775 aa17.18■□□□□ 0.34
SF3B2-215ENST00000534307 TAF1CQ15572 869 aaPredicted RBP17.18■□□□□ 0.34
SF3B2-215ENST00000534307 TEX11Q8IYF3 940 aa17.18■□□□□ 0.34
SF3B2-215ENST00000534307 SCYL3Q8IZE3 742 aa17.18■□□□□ 0.34
SF3B2-215ENST00000534307 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.18■□□□□ 0.34
SF3B2-215ENST00000534307 KIF1BPQ96EK5 621 aa17.18■□□□□ 0.34
SF3B2-215ENST00000534307 NDUFB9Q9Y6M9 179 aa17.18■□□□□ 0.34
SF3B2-215ENST00000534307 ZSWIM8A7E2V4 1837 aa17.18■□□□□ 0.34
SF3B2-215ENST00000534307 PTPRFP10586 1907 aa17.17■□□□□ 0.34
SF3B2-215ENST00000534307 RAB11FIP3O75154 756 aa17.17■□□□□ 0.34
SF3B2-215ENST00000534307 EN2P19622 333 aaPredicted RBP17.17■□□□□ 0.34
SF3B2-215ENST00000534307 ARMC5Q96C12 935 aa17.17■□□□□ 0.34
SF3B2-215ENST00000534307 ANTXR1Q9H6X2 564 aa17.17■□□□□ 0.34
SF3B2-215ENST00000534307 AATFQ9NY61 560 aaKnown RBP eCLIP17.17■□□□□ 0.34
SF3B2-215ENST00000534307 PTPN22Q9Y2R2 807 aa17.17■□□□□ 0.34
SF3B2-215ENST00000534307 CXCL11O14625 94 aa17.16■□□□□ 0.34
SF3B2-215ENST00000534307 CTNND1O60716 968 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms