RNA–Protein interactions for RNA: ENST00000534055.1

AP001360.1-201, humanhuman

TSL 2 BASIC

Gene AP001360.1, Length 518 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001360.1-201ENST00000534055 CXXC1Q9P0U4 656 aaPredicted RBP12.6□□□□□ -0.39
AP001360.1-201ENST00000534055 LAS1LQ9Y4W2 734 aaKnown RBP12.6□□□□□ -0.39
AP001360.1-201ENST00000534055 DOCK3Q8IZD9 2030 aa12.6□□□□□ -0.39
AP001360.1-201ENST00000534055 SMIM22K7EJ46 135 aa12.59□□□□□ -0.39
AP001360.1-201ENST00000534055 ZEB1P37275 1124 aaPredicted RBP12.59□□□□□ -0.39
AP001360.1-201ENST00000534055 KCNQ1P51787 676 aa12.59□□□□□ -0.39
AP001360.1-201ENST00000534055 TFF2Q03403 129 aa12.59□□□□□ -0.39
AP001360.1-201ENST00000534055 MICALL1Q8N3F8 863 aa12.59□□□□□ -0.39
AP001360.1-201ENST00000534055 TEKT1Q969V4 418 aa12.59□□□□□ -0.39
AP001360.1-201ENST00000534055 C11orf16Q9NQ32 467 aa12.59□□□□□ -0.39
AP001360.1-201ENST00000534055 ZNF112Q9UJU3 913 aa12.59□□□□□ -0.39
AP001360.1-201ENST00000534055 NHLH1Q02575 133 aa12.58□□□□□ -0.4
AP001360.1-201ENST00000534055 SKIV2LQ15477 1246 aaKnown RBP12.58□□□□□ -0.4
AP001360.1-201ENST00000534055 CCDC129Q6ZRS4 1044 aa12.58□□□□□ -0.4
AP001360.1-201ENST00000534055 TRMT44Q8IYL2 757 aaKnown RBP12.58□□□□□ -0.4
AP001360.1-201ENST00000534055 PLEKHF1Q96S99 279 aa12.58□□□□□ -0.4
AP001360.1-201ENST00000534055 NUDT12Q9BQG2 462 aa12.58□□□□□ -0.4
AP001360.1-201ENST00000534055 PHAXQ9H814 394 aaKnown RBP12.58□□□□□ -0.4
AP001360.1-201ENST00000534055 AGTPBP1Q9UPW5 1226 aa12.58□□□□□ -0.4
AP001360.1-201ENST00000534055 AK9Q5TCS8 1911 aa12.58□□□□□ -0.4
AP001360.1-201ENST00000534055 TRIM75PA6NK02 468 aa12.57□□□□□ -0.4
AP001360.1-201ENST00000534055 HOXB7P09629 217 aa12.57□□□□□ -0.4
AP001360.1-201ENST00000534055 GCLCP48506 637 aaPredicted RBP12.57□□□□□ -0.4
AP001360.1-201ENST00000534055 RIPK4P57078 832 aa12.57□□□□□ -0.4
AP001360.1-201ENST00000534055 FKBP1CQ5VVH2 108 aa12.57□□□□□ -0.4
AP001360.1-201ENST00000534055 SOCS4Q8WXH5 440 aa12.57□□□□□ -0.4
AP001360.1-201ENST00000534055 UIMC1Q96RL1 719 aa12.57□□□□□ -0.4
AP001360.1-201ENST00000534055 METTL22Q9BUU2 404 aaPredicted RBP12.57□□□□□ -0.4
AP001360.1-201ENST00000534055 PLIN1O60240 522 aa12.56□□□□□ -0.4
AP001360.1-201ENST00000534055 PPP2R1AP30153 589 aa12.56□□□□□ -0.4
AP001360.1-201ENST00000534055 TCP10Q12799 353 aa12.56□□□□□ -0.4
AP001360.1-201ENST00000534055 SCYL3Q8IZE3 742 aa12.56□□□□□ -0.4
AP001360.1-201ENST00000534055 PNNQ9H307 717 aaKnown RBP12.56□□□□□ -0.4
AP001360.1-201ENST00000534055 PDLIM7Q9NR12 457 aa12.56□□□□□ -0.4
AP001360.1-201ENST00000534055 DNM1LO00429 736 aa12.55□□□□□ -0.4
AP001360.1-201ENST00000534055 DDX58O95786 925 aaKnown RBP12.55□□□□□ -0.4
AP001360.1-201ENST00000534055 XRCC5P13010 732 aaKnown RBP12.55□□□□□ -0.4
AP001360.1-201ENST00000534055 PTPRAP18433 802 aa12.55□□□□□ -0.4
AP001360.1-201ENST00000534055 CNGA1P29973 690 aa12.55□□□□□ -0.4
AP001360.1-201ENST00000534055 HDLBPQ00341 1268 aaKnown RBP12.55□□□□□ -0.4
AP001360.1-201ENST00000534055 LMOD3Q0VAK6 560 aa12.55□□□□□ -0.4
AP001360.1-201ENST00000534055 ADGRE1Q14246 886 aa12.55□□□□□ -0.4
AP001360.1-201ENST00000534055 TRIM60Q495X7 471 aa12.55□□□□□ -0.4
AP001360.1-201ENST00000534055 TREML2Q5T2D2 321 aa12.55□□□□□ -0.4
AP001360.1-201ENST00000534055 UBE3BQ7Z3V4 1068 aa12.55□□□□□ -0.4
AP001360.1-201ENST00000534055 SH3RF1Q7Z6J0 888 aa12.55□□□□□ -0.4
AP001360.1-201ENST00000534055 TIMELESSQ9UNS1 1208 aa12.55□□□□□ -0.4
AP001360.1-201ENST00000534055 AFG3L2Q9Y4W6 797 aa12.55□□□□□ -0.4
AP001360.1-201ENST00000534055 FRMPD3Q5JV73 1810 aa12.55□□□□□ -0.4
AP001360.1-201ENST00000534055 PLXNB2O15031 1838 aa12.54□□□□□ -0.4
AP001360.1-201ENST00000534055 ANKRD18BA2A2Z9 1011 aa12.54□□□□□ -0.4
AP001360.1-201ENST00000534055 EPHB4P54760 987 aa12.54□□□□□ -0.4
AP001360.1-201ENST00000534055 CHAF1AQ13111 956 aaPredicted RBP12.54□□□□□ -0.4
AP001360.1-201ENST00000534055 GRIK5Q16478 980 aa12.54□□□□□ -0.4
AP001360.1-201ENST00000534055 SLC39A5Q6ZMH5 540 aa12.54□□□□□ -0.4
AP001360.1-201ENST00000534055 TDRD7Q8NHU6 1098 aaKnown RBP12.54□□□□□ -0.4
AP001360.1-201ENST00000534055 FAM151AQ8WW52 585 aa12.54□□□□□ -0.4
AP001360.1-201ENST00000534055 ZDHHC15Q96MV8 337 aa12.54□□□□□ -0.4
AP001360.1-201ENST00000534055 TRIM43BA6NCK2 446 aa12.53□□□□□ -0.4
AP001360.1-201ENST00000534055 PRR33A8MZF0 331 aa12.53□□□□□ -0.4
AP001360.1-201ENST00000534055 MYCNP04198 464 aaPredicted RBP12.53□□□□□ -0.4
AP001360.1-201ENST00000534055 HIBADHP31937 336 aaKnown RBP12.53□□□□□ -0.4
AP001360.1-201ENST00000534055 RGS2P41220 211 aa12.53□□□□□ -0.4
AP001360.1-201ENST00000534055 FOXK2Q01167 660 aa12.53□□□□□ -0.4
AP001360.1-201ENST00000534055 CCL14Q16627 93 aa12.53□□□□□ -0.4
AP001360.1-201ENST00000534055 DUSP27Q5VZP5 1158 aa12.53□□□□□ -0.4
AP001360.1-201ENST00000534055 CCAR1Q8IX12 1150 aaKnown RBP12.53□□□□□ -0.4
AP001360.1-201ENST00000534055 KHSRPQ92945 711 aaKnown RBP eCLIP12.53□□□□□ -0.4
AP001360.1-201ENST00000534055 TRIM43Q96BQ3 446 aaPredicted RBP12.53□□□□□ -0.4
AP001360.1-201ENST00000534055 DDX20Q9UHI6 824 aaKnown RBP12.53□□□□□ -0.4
AP001360.1-201ENST00000534055 MAP3K2Q9Y2U5 619 aa12.53□□□□□ -0.4
AP001360.1-201ENST00000534055 A0A1B0GUL6 1792 aa12.52□□□□□ -0.41
AP001360.1-201ENST00000534055 KBTBD13C9JR72 458 aa12.52□□□□□ -0.41
AP001360.1-201ENST00000534055 MSCO60682 206 aa12.52□□□□□ -0.41
AP001360.1-201ENST00000534055 FRAT2O75474 233 aaPredicted RBP12.52□□□□□ -0.41
AP001360.1-201ENST00000534055 RAG1P15918 1043 aa12.52□□□□□ -0.41
AP001360.1-201ENST00000534055 PBX2P40425 430 aa12.52□□□□□ -0.41
AP001360.1-201ENST00000534055 GYG1P46976 350 aa12.52□□□□□ -0.41
AP001360.1-201ENST00000534055 FPGSQ05932 587 aa12.52□□□□□ -0.41
AP001360.1-201ENST00000534055 NEXNQ0ZGT2 675 aa12.52□□□□□ -0.41
AP001360.1-201ENST00000534055 PABPC4Q13310 644 aaKnown RBP eCLIP12.52□□□□□ -0.41
AP001360.1-201ENST00000534055 GJC2Q5T442 439 aaPredicted RBP12.52□□□□□ -0.41
AP001360.1-201ENST00000534055 APOBEC3HQ6NTF7 200 aaKnown RBP12.52□□□□□ -0.41
AP001360.1-201ENST00000534055 LPAR1Q92633 364 aa12.52□□□□□ -0.41
AP001360.1-201ENST00000534055 PBX4Q9BYU1 374 aa12.52□□□□□ -0.41
AP001360.1-201ENST00000534055 CWC22Q9HCG8 908 aaKnown RBP12.52□□□□□ -0.41
AP001360.1-201ENST00000534055 CHMP3Q9Y3E7 222 aa12.52□□□□□ -0.41
AP001360.1-201ENST00000534055 LRRFIP2Q9Y608 721 aaKnown RBP12.52□□□□□ -0.41
AP001360.1-201ENST00000534055 PTPRFP10586 1907 aa12.51□□□□□ -0.41
AP001360.1-201ENST00000534055 CHL1O00533 1208 aa12.51□□□□□ -0.41
AP001360.1-201ENST00000534055 CSPP1Q1MSJ5 1256 aa12.51□□□□□ -0.41
AP001360.1-201ENST00000534055 VPS37DQ86XT2 251 aa12.51□□□□□ -0.41
AP001360.1-201ENST00000534055 TBC1D22AQ8WUA7 517 aa12.51□□□□□ -0.41
AP001360.1-201ENST00000534055 FBXL18Q96ME1 805 aa12.51□□□□□ -0.41
AP001360.1-201ENST00000534055 APBA2Q99767 749 aa12.51□□□□□ -0.41
AP001360.1-201ENST00000534055 IQSEC3Q9UPP2 1182 aaPredicted RBP12.51□□□□□ -0.41
AP001360.1-201ENST00000534055 MAST3O60307 1309 aa12.51□□□□□ -0.41
AP001360.1-201ENST00000534055 PI4K2BG5E9Z4 385 aa12.5□□□□□ -0.41
AP001360.1-201ENST00000534055 IGKV5-2P06315 115 aa12.5□□□□□ -0.41
AP001360.1-201ENST00000534055 ITGB8P26012 769 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms