RNA–Protein interactions for RNA: ENST00000533990.1

XRRA1-218, Transcript of X-ray radiation resistance associated 1, human

TSL 3

Gene XRRA1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
XRRA1-218	ENST00000533990	PPAT	Q06203	517 aa		13.61	□□□□□ -0.23
XRRA1-218	ENST00000533990	NOL9	Q5SY16	702 aa	Known RBP	13.61	□□□□□ -0.23
XRRA1-218	ENST00000533990	FAM151A	Q8WW52	585 aa		13.61	□□□□□ -0.23
XRRA1-218	ENST00000533990	ZCCHC17	Q9NP64	241 aa	Known RBP	13.61	□□□□□ -0.23
XRRA1-218	ENST00000533990	MYPN	Q86TC9	1320 aa		13.61	□□□□□ -0.23
XRRA1-218	ENST00000533990	KIF16B	Q96L93	1317 aa		13.61	□□□□□ -0.23
XRRA1-218	ENST00000533990	FRMPD3	Q5JV73	1810 aa		13.6	□□□□□ -0.23
XRRA1-218	ENST00000533990	PEX10	O60683	326 aa		13.6	□□□□□ -0.23
XRRA1-218	ENST00000533990	RGS3	P49796	1198 aa		13.6	□□□□□ -0.23
XRRA1-218	ENST00000533990	RRP1B	Q14684	758 aa	Known RBP	13.6	□□□□□ -0.23
XRRA1-218	ENST00000533990	CAVIN4	Q5BKX8	364 aa		13.6	□□□□□ -0.23
XRRA1-218	ENST00000533990	TNN	Q9UQP3	1299 aa		13.6	□□□□□ -0.23
XRRA1-218	ENST00000533990	FOCAD	Q5VW36	1801 aa		13.6	□□□□□ -0.23
XRRA1-218	ENST00000533990	WDHD1	O75717	1129 aa	Predicted RBP	13.59	□□□□□ -0.23
XRRA1-218	ENST00000533990	GRK4	P32298	578 aa		13.59	□□□□□ -0.23
XRRA1-218	ENST00000533990	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.59	□□□□□ -0.23
XRRA1-218	ENST00000533990	PI16	Q6UXB8	463 aa		13.59	□□□□□ -0.23
XRRA1-218	ENST00000533990	DIS3L	Q8TF46	1054 aa	Known RBP	13.59	□□□□□ -0.23
XRRA1-218	ENST00000533990	MRI	Q9BWK5	157 aa		13.59	□□□□□ -0.23
XRRA1-218	ENST00000533990	TMOD2	Q9NZR1	351 aa		13.59	□□□□□ -0.23
XRRA1-218	ENST00000533990	GAK	O14976	1311 aa		13.59	□□□□□ -0.23
XRRA1-218	ENST00000533990		A0A0G2JLL6	359 aa	Predicted RBP	13.58	□□□□□ -0.24
XRRA1-218	ENST00000533990	IFIT1	P09914	478 aa	Known RBP	13.58	□□□□□ -0.24
XRRA1-218	ENST00000533990	GJA8	P48165	433 aa		13.58	□□□□□ -0.24
XRRA1-218	ENST00000533990	RASGRF1	Q13972	1273 aa		13.58	□□□□□ -0.24
XRRA1-218	ENST00000533990	ATP2B3	Q16720	1220 aa		13.58	□□□□□ -0.24
XRRA1-218	ENST00000533990	TREML2	Q5T2D2	321 aa		13.58	□□□□□ -0.24
XRRA1-218	ENST00000533990	DCAF15	Q66K64	600 aa		13.58	□□□□□ -0.24
XRRA1-218	ENST00000533990	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.58	□□□□□ -0.24
XRRA1-218	ENST00000533990	NBPF11	Q86T75	865 aa		13.58	□□□□□ -0.24
XRRA1-218	ENST00000533990	USP40	Q9NVE5	1235 aa		13.58	□□□□□ -0.24
XRRA1-218	ENST00000533990	MAST2	Q6P0Q8	1798 aa		13.58	□□□□□ -0.24
XRRA1-218	ENST00000533990	FMNL1	O95466	1100 aa	Predicted RBP	13.57	□□□□□ -0.24
XRRA1-218	ENST00000533990	SLC5A1	P13866	664 aa		13.57	□□□□□ -0.24
XRRA1-218	ENST00000533990	PTPRA	P18433	802 aa		13.57	□□□□□ -0.24
XRRA1-218	ENST00000533990	TRIM32	Q13049	653 aa		13.57	□□□□□ -0.24
XRRA1-218	ENST00000533990	U2AF1L4	Q8WU68	220 aa	Known RBP	13.57	□□□□□ -0.24
XRRA1-218	ENST00000533990	LPIN2	Q92539	896 aa		13.57	□□□□□ -0.24
XRRA1-218	ENST00000533990	LRCH3	Q96II8	777 aa		13.57	□□□□□ -0.24
XRRA1-218	ENST00000533990	SUGT1	Q9Y2Z0	365 aa		13.57	□□□□□ -0.24
XRRA1-218	ENST00000533990	LRRFIP2	Q9Y608	721 aa	Known RBP	13.57	□□□□□ -0.24
XRRA1-218	ENST00000533990	MAST3	O60307	1309 aa		13.57	□□□□□ -0.24
XRRA1-218	ENST00000533990	GJB1	P08034	283 aa		13.56	□□□□□ -0.24
XRRA1-218	ENST00000533990	FLT3LG	P49771	235 aa		13.56	□□□□□ -0.24
XRRA1-218	ENST00000533990	RHBDL3	P58872	404 aa		13.56	□□□□□ -0.24
XRRA1-218	ENST00000533990	JAG1	P78504	1218 aa		13.56	□□□□□ -0.24
XRRA1-218	ENST00000533990	WDR66	Q8TBY9	1149 aa		13.56	□□□□□ -0.24
XRRA1-218	ENST00000533990	RAET1E	Q8TD07	263 aa		13.56	□□□□□ -0.24
XRRA1-218	ENST00000533990	MEIS3	Q99687	375 aa		13.56	□□□□□ -0.24
XRRA1-218	ENST00000533990	RNF208	Q9H0X6	261 aa		13.56	□□□□□ -0.24
XRRA1-218	ENST00000533990	AFG3L2	Q9Y4W6	797 aa		13.56	□□□□□ -0.24
XRRA1-218	ENST00000533990	ZHX2	Q9Y6X8	837 aa		13.56	□□□□□ -0.24
XRRA1-218	ENST00000533990	PTPRC	P08575	1304 aa		13.56	□□□□□ -0.24
XRRA1-218	ENST00000533990	SALL1	Q9NSC2	1324 aa		13.56	□□□□□ -0.24
XRRA1-218	ENST00000533990	ZBTB7B	O15156	539 aa	Predicted RBP	13.55	□□□□□ -0.24
XRRA1-218	ENST00000533990	INHA	P05111	366 aa		13.55	□□□□□ -0.24
XRRA1-218	ENST00000533990	LDHB	P07195	334 aa	Known RBP	13.55	□□□□□ -0.24
XRRA1-218	ENST00000533990	SLFN5	Q08AF3	891 aa		13.55	□□□□□ -0.24
XRRA1-218	ENST00000533990	KIF22	Q14807	665 aa		13.55	□□□□□ -0.24
XRRA1-218	ENST00000533990	CCDC102B	Q68D86	513 aa		13.55	□□□□□ -0.24
XRRA1-218	ENST00000533990	GADL1	Q6ZQY3	521 aa		13.55	□□□□□ -0.24
XRRA1-218	ENST00000533990	SCYL3	Q8IZE3	742 aa		13.55	□□□□□ -0.24
XRRA1-218	ENST00000533990	ANP32C	O43423	234 aa		13.54	□□□□□ -0.24
XRRA1-218	ENST00000533990	FARP2	O94887	1054 aa	Predicted RBP	13.54	□□□□□ -0.24
XRRA1-218	ENST00000533990	MNX1	P50219	401 aa	Predicted RBP	13.54	□□□□□ -0.24
XRRA1-218	ENST00000533990	TIMM10	P62072	90 aa		13.54	□□□□□ -0.24
XRRA1-218	ENST00000533990	PICALM	Q13492	652 aa		13.54	□□□□□ -0.24
XRRA1-218	ENST00000533990	DPF3	Q92784	378 aa		13.54	□□□□□ -0.24
XRRA1-218	ENST00000533990	PARK7	Q99497	189 aa	Known RBP	13.54	□□□□□ -0.24
XRRA1-218	ENST00000533990	IDI2	Q9BXS1	227 aa		13.54	□□□□□ -0.24
XRRA1-218	ENST00000533990		A0A0C4DFX4	3053 aa		13.54	□□□□□ -0.24
XRRA1-218	ENST00000533990	LAMA2	P24043	3122 aa	Known RBP	13.53	□□□□□ -0.24
XRRA1-218	ENST00000533990	TRIM75P	A6NK02	468 aa		13.53	□□□□□ -0.24
XRRA1-218	ENST00000533990	ADCY3	O60266	1144 aa		13.53	□□□□□ -0.24
XRRA1-218	ENST00000533990	BTD	P43251	543 aa		13.53	□□□□□ -0.24
XRRA1-218	ENST00000533990	PRMT2	P55345	433 aa		13.53	□□□□□ -0.24
XRRA1-218	ENST00000533990	MAP3K10	Q02779	954 aa		13.53	□□□□□ -0.24
XRRA1-218	ENST00000533990	POTEE	Q6S8J3	1075 aa		13.53	□□□□□ -0.24
XRRA1-218	ENST00000533990	TBC1D9	Q6ZT07	1266 aa		13.53	□□□□□ -0.24
XRRA1-218	ENST00000533990	DNAH12	Q6ZR08	3092 aa		13.53	□□□□□ -0.24
XRRA1-218	ENST00000533990	CXCL11	O14625	94 aa		13.52	□□□□□ -0.25
XRRA1-218	ENST00000533990	CIAO1	O76071	339 aa		13.52	□□□□□ -0.25
XRRA1-218	ENST00000533990	GNRH1	P01148	92 aa		13.52	□□□□□ -0.25
XRRA1-218	ENST00000533990	FCGRT	P55899	365 aa		13.52	□□□□□ -0.25
XRRA1-218	ENST00000533990	ANKRD13C	Q8N6S4	541 aa		13.52	□□□□□ -0.25
XRRA1-218	ENST00000533990	DEFB118	Q96PH6	123 aa		13.52	□□□□□ -0.25
XRRA1-218	ENST00000533990	PAK6	Q9NQU5	681 aa	Predicted RBP	13.52	□□□□□ -0.25
XRRA1-218	ENST00000533990	SMC4	Q9NTJ3	1288 aa		13.52	□□□□□ -0.25
XRRA1-218	ENST00000533990	BIN2	Q9UBW5	565 aa	Predicted RBP	13.52	□□□□□ -0.25
XRRA1-218	ENST00000533990	MROH7-TTC4	A0A0A0MT08	1334 aa		13.51	□□□□□ -0.25
XRRA1-218	ENST00000533990	ENTPD3	O75355	529 aa		13.51	□□□□□ -0.25
XRRA1-218	ENST00000533990	SGPL1	O95470	568 aa		13.51	□□□□□ -0.25
XRRA1-218	ENST00000533990	MECOM	Q03112	1051 aa		13.51	□□□□□ -0.25
XRRA1-218	ENST00000533990	TFCP2	Q12800	502 aa		13.51	□□□□□ -0.25
XRRA1-218	ENST00000533990	ARHGEF6	Q15052	776 aa		13.51	□□□□□ -0.25
XRRA1-218	ENST00000533990	TRMT2A	Q8IZ69	625 aa	Known RBP	13.51	□□□□□ -0.25
XRRA1-218	ENST00000533990	DNAJC18	Q9H819	358 aa		13.51	□□□□□ -0.25
XRRA1-218	ENST00000533990	ABCF2	Q9UG63	623 aa		13.51	□□□□□ -0.25
XRRA1-218	ENST00000533990	NOB1	Q9ULX3	412 aa	Known RBP	13.51	□□□□□ -0.25
XRRA1-218	ENST00000533990	EYS	Q5T1H1	3165 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms