RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 METTL16Q86W50 562 aaKnown RBP8.36□□□□□ -1.07
RNPC3-209ENST00000533834 NCOA7Q8NI08 942 aa8.36□□□□□ -1.07
RNPC3-209ENST00000533834 AKT1S1Q96B36 256 aa8.36□□□□□ -1.07
RNPC3-209ENST00000533834 SNED1Q8TER0 1413 aa8.36□□□□□ -1.07
RNPC3-209ENST00000533834 CMA1P23946 247 aa8.36□□□□□ -1.07
RNPC3-209ENST00000533834 NOVP48745 357 aa8.36□□□□□ -1.07
RNPC3-209ENST00000533834 CCDC158Q5M9N0 1113 aa8.36□□□□□ -1.07
RNPC3-209ENST00000533834 TNMDQ9H2S6 317 aa8.36□□□□□ -1.07
RNPC3-209ENST00000533834 CCDC87Q9NVE4 849 aa8.36□□□□□ -1.07
RNPC3-209ENST00000533834 FBXO2Q9UK22 296 aaPredicted RBP8.36□□□□□ -1.07
RNPC3-209ENST00000533834 ANKRD18BA2A2Z9 1011 aa8.36□□□□□ -1.07
RNPC3-209ENST00000533834 USP27XA6NNY8 438 aa8.36□□□□□ -1.07
RNPC3-209ENST00000533834 PRKAB2O43741 272 aa8.36□□□□□ -1.07
RNPC3-209ENST00000533834 HAND2P61296 217 aa8.36□□□□□ -1.07
RNPC3-209ENST00000533834 TBX2Q13207 712 aaPredicted RBP8.36□□□□□ -1.07
RNPC3-209ENST00000533834 TTF1Q15361 905 aaPredicted RBP8.36□□□□□ -1.07
RNPC3-209ENST00000533834 SLC35G1Q2M3R5 365 aa8.36□□□□□ -1.07
RNPC3-209ENST00000533834 DPCR1Q3MIW9 517 aa8.36□□□□□ -1.07
RNPC3-209ENST00000533834 SH3RF1Q7Z6J0 888 aa8.36□□□□□ -1.07
RNPC3-209ENST00000533834 LRRC8AQ8IWT6 810 aa8.36□□□□□ -1.07
RNPC3-209ENST00000533834 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.36□□□□□ -1.07
RNPC3-209ENST00000533834 KLF18A0A0U1RQI7 1052 aa8.35□□□□□ -1.07
RNPC3-209ENST00000533834 GPTP24298 496 aa8.35□□□□□ -1.07
RNPC3-209ENST00000533834 KCNJ6P48051 423 aa8.35□□□□□ -1.07
RNPC3-209ENST00000533834 FKBP4Q02790 459 aaKnown RBP eCLIP8.35□□□□□ -1.07
RNPC3-209ENST00000533834 GRIN1Q05586 938 aa8.35□□□□□ -1.07
RNPC3-209ENST00000533834 EARS2Q5JPH6 523 aaKnown RBP8.35□□□□□ -1.07
RNPC3-209ENST00000533834 LDHAL6AQ6ZMR3 332 aa8.35□□□□□ -1.07
RNPC3-209ENST00000533834 UBE2Q2Q8WVN8 375 aa8.35□□□□□ -1.07
RNPC3-209ENST00000533834 PRIMPOLQ96LW4 560 aa8.35□□□□□ -1.07
RNPC3-209ENST00000533834 KIAA1468Q9P260 1216 aa8.35□□□□□ -1.07
RNPC3-209ENST00000533834 CTNNA3Q9UI47 895 aa8.35□□□□□ -1.07
RNPC3-209ENST00000533834 A0A087X0B3 334 aa8.35□□□□□ -1.07
RNPC3-209ENST00000533834 IFNAR1P17181 557 aa8.35□□□□□ -1.07
RNPC3-209ENST00000533834 IMMTQ16891 758 aaKnown RBP8.35□□□□□ -1.07
RNPC3-209ENST00000533834 CCDC93Q567U6 631 aa8.35□□□□□ -1.07
RNPC3-209ENST00000533834 SLC9C2Q5TAH2 1124 aa8.35□□□□□ -1.07
RNPC3-209ENST00000533834 FBXO33Q7Z6M2 555 aa8.35□□□□□ -1.07
RNPC3-209ENST00000533834 TMEM87BQ96K49 555 aa8.35□□□□□ -1.07
RNPC3-209ENST00000533834 LOC102724428A0A0B4J2F2 783 aa8.35□□□□□ -1.07
RNPC3-209ENST00000533834 CTAGE5O15320 804 aa8.35□□□□□ -1.07
RNPC3-209ENST00000533834 ZNF18P17022 549 aa8.35□□□□□ -1.07
RNPC3-209ENST00000533834 SIK1P57059 783 aa8.35□□□□□ -1.07
RNPC3-209ENST00000533834 ARMCX5Q6P1M9 558 aa8.35□□□□□ -1.07
RNPC3-209ENST00000533834 CDCA7Q9BWT1 371 aaPredicted RBP8.35□□□□□ -1.07
RNPC3-209ENST00000533834 UQCRFS1P1P0C7P4 283 aa8.34□□□□□ -1.07
RNPC3-209ENST00000533834 SLC5A1P13866 664 aa8.34□□□□□ -1.07
RNPC3-209ENST00000533834 PFKFB1P16118 471 aa8.34□□□□□ -1.07
RNPC3-209ENST00000533834 KLRK1P26718 216 aa8.34□□□□□ -1.07
RNPC3-209ENST00000533834 METTL24Q5JXM2 366 aa8.34□□□□□ -1.07
RNPC3-209ENST00000533834 ANO1Q5XXA6 986 aa8.34□□□□□ -1.07
RNPC3-209ENST00000533834 CLEC4GQ6UXB4 293 aa8.34□□□□□ -1.07
RNPC3-209ENST00000533834 CCDC85AQ96PX6 553 aaPredicted RBP8.34□□□□□ -1.07
RNPC3-209ENST00000533834 TBC1D2BQ9UPU7 963 aa8.34□□□□□ -1.07
RNPC3-209ENST00000533834 KCNQ2O43526 872 aa8.34□□□□□ -1.07
RNPC3-209ENST00000533834 MMP1P03956 469 aa8.34□□□□□ -1.07
RNPC3-209ENST00000533834 MSNP26038 577 aaKnown RBP8.34□□□□□ -1.07
RNPC3-209ENST00000533834 ZNF165P49910 485 aa8.34□□□□□ -1.07
RNPC3-209ENST00000533834 FXR2P51116 673 aaKnown RBP eCLIP8.34□□□□□ -1.07
RNPC3-209ENST00000533834 CHRNDQ07001 517 aa8.34□□□□□ -1.07
RNPC3-209ENST00000533834 PDE4BQ07343 736 aa8.34□□□□□ -1.07
RNPC3-209ENST00000533834 STX1AQ16623 288 aa8.34□□□□□ -1.07
RNPC3-209ENST00000533834 VPS37DQ86XT2 251 aa8.34□□□□□ -1.07
RNPC3-209ENST00000533834 MRPS27Q92552 414 aaKnown RBP8.34□□□□□ -1.07
RNPC3-209ENST00000533834 ERCC4Q92889 916 aaPredicted RBP8.34□□□□□ -1.07
RNPC3-209ENST00000533834 UQCRHLA0A096LP55 91 aa8.33□□□□□ -1.08
RNPC3-209ENST00000533834 B4E1Z4 1266 aa8.33□□□□□ -1.08
RNPC3-209ENST00000533834 ZNF213O14771 459 aa8.33□□□□□ -1.08
RNPC3-209ENST00000533834 ACTN4O43707 911 aaKnown RBP8.33□□□□□ -1.08
RNPC3-209ENST00000533834 UQCRHP07919 91 aa8.33□□□□□ -1.08
RNPC3-209ENST00000533834 KCNJ4P48050 445 aa8.33□□□□□ -1.08
RNPC3-209ENST00000533834 BCAMP50895 628 aa8.33□□□□□ -1.08
RNPC3-209ENST00000533834 SYCP1Q15431 976 aa8.33□□□□□ -1.08
RNPC3-209ENST00000533834 KRT40Q6A162 431 aa8.33□□□□□ -1.08
RNPC3-209ENST00000533834 PHF20Q9BVI0 1012 aa8.33□□□□□ -1.08
RNPC3-209ENST00000533834 R3HCC1Q9Y3T6 440 aaKnown RBP8.33□□□□□ -1.08
RNPC3-209ENST00000533834 A0A1B0GVL5 298 aa8.33□□□□□ -1.08
RNPC3-209ENST00000533834 IKBKBO14920 756 aa8.33□□□□□ -1.08
RNPC3-209ENST00000533834 PPFIA3O75145 1194 aa8.33□□□□□ -1.08
RNPC3-209ENST00000533834 FECHP22830 423 aa8.33□□□□□ -1.08
RNPC3-209ENST00000533834 PBX1P40424 430 aa8.33□□□□□ -1.08
RNPC3-209ENST00000533834 CTDSPL2Q05D32 466 aa8.33□□□□□ -1.08
RNPC3-209ENST00000533834 PARP10Q53GL7 1025 aa8.33□□□□□ -1.08
RNPC3-209ENST00000533834 AKNAD1Q5T1N1 836 aa8.33□□□□□ -1.08
RNPC3-209ENST00000533834 E4F1Q66K89 784 aaPredicted RBP8.33□□□□□ -1.08
RNPC3-209ENST00000533834 RCSD1Q6JBY9 416 aa8.33□□□□□ -1.08
RNPC3-209ENST00000533834 C4orf32Q8N8J7 132 aa8.33□□□□□ -1.08
RNPC3-209ENST00000533834 GOLGA8BA8MQT2 603 aa8.33□□□□□ -1.08
RNPC3-209ENST00000533834 TROAPQ12815 778 aa8.33□□□□□ -1.08
RNPC3-209ENST00000533834 IL17AQ16552 155 aa8.33□□□□□ -1.08
RNPC3-209ENST00000533834 CRACR2BQ8N4Y2 399 aaPredicted RBP8.33□□□□□ -1.08
RNPC3-209ENST00000533834 KCNG4Q8TDN1 519 aa8.33□□□□□ -1.08
RNPC3-209ENST00000533834 FAM84BQ96KN1 310 aaPredicted RBP8.33□□□□□ -1.08
RNPC3-209ENST00000533834 PDCL3Q9H2J4 239 aa8.33□□□□□ -1.08
RNPC3-209ENST00000533834 BSDC1Q9NW68 430 aaPredicted RBP8.33□□□□□ -1.08
RNPC3-209ENST00000533834 TRMT112Q9UI30 125 aaKnown RBP8.33□□□□□ -1.08
RNPC3-209ENST00000533834 GUCY1B3Q02153 619 aa8.32□□□□□ -1.08
RNPC3-209ENST00000533834 CHMP3Q9Y3E7 222 aa8.32□□□□□ -1.08
RNPC3-209ENST00000533834 FER1L6Q2WGJ9 1857 aa8.32□□□□□ -1.08
RNPC3-209ENST00000533834 ZNF202O95125 648 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms