RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 TMEM39AQ9NV64 488 aa5.92□□□□□ -1.46
BRCA2-205ENST00000533776 RNGTTO60942 597 aaKnown RBP5.91□□□□□ -1.46
BRCA2-205ENST00000533776 HCLS1P14317 486 aaPredicted RBP5.91□□□□□ -1.46
BRCA2-205ENST00000533776 HNRNPUQ00839 825 aaKnown RBP eCLIP5.91□□□□□ -1.46
BRCA2-205ENST00000533776 TTLL4Q14679 1199 aa5.91□□□□□ -1.46
BRCA2-205ENST00000533776 KIF4BQ2VIQ3 1234 aa5.91□□□□□ -1.46
BRCA2-205ENST00000533776 CYP27C1Q4G0S4 372 aa5.91□□□□□ -1.46
BRCA2-205ENST00000533776 SMYD4Q8IYR2 804 aaPredicted RBP5.91□□□□□ -1.46
BRCA2-205ENST00000533776 AGBL5Q8NDL9 886 aa5.91□□□□□ -1.46
BRCA2-205ENST00000533776 KRT82Q9NSB4 513 aa5.91□□□□□ -1.46
BRCA2-205ENST00000533776 PPP4R2Q9NY27 417 aa5.91□□□□□ -1.46
BRCA2-205ENST00000533776 DCTN4Q9UJW0 460 aa5.91□□□□□ -1.46
BRCA2-205ENST00000533776 PCDHGC5Q9Y5F6 944 aa5.91□□□□□ -1.46
BRCA2-205ENST00000533776 PNMA6FA0A0J9YX94 578 aa5.9□□□□□ -1.46
BRCA2-205ENST00000533776 MAPK1P28482 360 aa5.9□□□□□ -1.46
BRCA2-205ENST00000533776 NXPE4Q6UWF7 544 aa5.9□□□□□ -1.46
BRCA2-205ENST00000533776 SULF2Q8IWU5 870 aa5.9□□□□□ -1.46
BRCA2-205ENST00000533776 FAM181AQ8N9Y4 354 aa5.9□□□□□ -1.46
BRCA2-205ENST00000533776 STK35Q8TDR2 534 aa5.9□□□□□ -1.46
BRCA2-205ENST00000533776 DISC1Q9NRI5 854 aa5.9□□□□□ -1.46
BRCA2-205ENST00000533776 SLC5A6Q9Y289 635 aa5.9□□□□□ -1.46
BRCA2-205ENST00000533776 AKAP2Q9Y2D5 859 aa5.9□□□□□ -1.46
BRCA2-205ENST00000533776 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.89□□□□□ -1.47
BRCA2-205ENST00000533776 PDZD3Q86UT5 571 aa5.89□□□□□ -1.47
BRCA2-205ENST00000533776 PLD6Q8N2A8 252 aaKnown RBP5.89□□□□□ -1.47
BRCA2-205ENST00000533776 BCL7CQ8WUZ0 217 aaPredicted RBP5.89□□□□□ -1.47
BRCA2-205ENST00000533776 LEFTY1O75610 366 aa5.88□□□□□ -1.47
BRCA2-205ENST00000533776 NEFMP07197 916 aa5.88□□□□□ -1.47
BRCA2-205ENST00000533776 XRCC5P13010 732 aaKnown RBP5.88□□□□□ -1.47
BRCA2-205ENST00000533776 BNIP3Q12983 259 aa5.88□□□□□ -1.47
BRCA2-205ENST00000533776 PLCL1Q15111 1095 aa5.88□□□□□ -1.47
BRCA2-205ENST00000533776 MAP1SQ66K74 1059 aaPredicted RBP5.88□□□□□ -1.47
BRCA2-205ENST00000533776 WFDC3Q8IUB2 231 aa5.88□□□□□ -1.47
BRCA2-205ENST00000533776 SSU72Q9NP77 194 aaKnown RBP5.88□□□□□ -1.47
BRCA2-205ENST00000533776 NME2P22392 152 aa5.87□□□□□ -1.47
BRCA2-205ENST00000533776 ARNTP27540 789 aa5.87□□□□□ -1.47
BRCA2-205ENST00000533776 PLCB3Q01970 1234 aa5.87□□□□□ -1.47
BRCA2-205ENST00000533776 DSC3Q14574 896 aa5.87□□□□□ -1.47
BRCA2-205ENST00000533776 ARHGAP27Q6ZUM4 889 aa5.87□□□□□ -1.47
BRCA2-205ENST00000533776 SPRED2Q7Z698 418 aa5.87□□□□□ -1.47
BRCA2-205ENST00000533776 STK11IPQ8N1F8 1099 aa5.87□□□□□ -1.47
BRCA2-205ENST00000533776 NETO1Q8TDF5 533 aa5.87□□□□□ -1.47
BRCA2-205ENST00000533776 GPBAR1Q8TDU6 330 aa5.87□□□□□ -1.47
BRCA2-205ENST00000533776 ACSBG1Q96GR2 724 aa5.87□□□□□ -1.47
BRCA2-205ENST00000533776 CBX8Q9HC52 389 aa5.87□□□□□ -1.47
BRCA2-205ENST00000533776 PCOLCE2Q9UKZ9 415 aa5.87□□□□□ -1.47
BRCA2-205ENST00000533776 GNEQ9Y223 722 aaKnown RBP5.87□□□□□ -1.47
BRCA2-205ENST00000533776 U3KQE9 123 aa5.87□□□□□ -1.47
BRCA2-205ENST00000533776 TREHO43280 583 aa5.86□□□□□ -1.47
BRCA2-205ENST00000533776 ENOX2Q16206 610 aaKnown RBP5.86□□□□□ -1.47
BRCA2-205ENST00000533776 TPTE2Q6XPS3 522 aa5.86□□□□□ -1.47
BRCA2-205ENST00000533776 TOP6BLQ8N6T0 577 aa5.86□□□□□ -1.47
BRCA2-205ENST00000533776 ISL2Q96A47 359 aa5.86□□□□□ -1.47
BRCA2-205ENST00000533776 MISP3Q96FF7 219 aa5.86□□□□□ -1.47
BRCA2-205ENST00000533776 EMILIN2Q9BXX0 1053 aa5.86□□□□□ -1.47
BRCA2-205ENST00000533776 CSADQ9Y600 493 aa5.86□□□□□ -1.47
BRCA2-205ENST00000533776 CD96P40200 585 aa5.85□□□□□ -1.47
BRCA2-205ENST00000533776 MAPK8P45983 427 aa5.85□□□□□ -1.47
BRCA2-205ENST00000533776 ZNF792Q3KQV3 632 aa5.85□□□□□ -1.47
BRCA2-205ENST00000533776 MPRIPQ6WCQ1 1025 aa5.85□□□□□ -1.47
BRCA2-205ENST00000533776 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.85□□□□□ -1.47
BRCA2-205ENST00000533776 C3orf58Q8NDZ4 430 aa5.85□□□□□ -1.47
BRCA2-205ENST00000533776 DUSP23Q9BVJ7 150 aa5.85□□□□□ -1.47
BRCA2-205ENST00000533776 FBXO24O75426 580 aa5.84□□□□□ -1.47
BRCA2-205ENST00000533776 PAPLNO95428 1278 aa5.84□□□□□ -1.47
BRCA2-205ENST00000533776 BRD1O95696 1058 aa5.84□□□□□ -1.47
BRCA2-205ENST00000533776 CD8BP10966 210 aa5.84□□□□□ -1.47
BRCA2-205ENST00000533776 ITIH2P19823 946 aa5.84□□□□□ -1.47
BRCA2-205ENST00000533776 ERVK-24P63145 666 aa5.84□□□□□ -1.47
BRCA2-205ENST00000533776 ZNF252P-AS1Q0IIN9 211 aa5.84□□□□□ -1.47
BRCA2-205ENST00000533776 ZC3H12AQ5D1E8 599 aaKnown RBP5.84□□□□□ -1.47
BRCA2-205ENST00000533776 RNF214Q8ND24 703 aa5.84□□□□□ -1.47
BRCA2-205ENST00000533776 NECAB3Q96P71 396 aaPredicted RBP5.84□□□□□ -1.47
BRCA2-205ENST00000533776 SETDB2Q96T68 719 aa5.84□□□□□ -1.47
BRCA2-205ENST00000533776 PICK1Q9NRD5 415 aa5.84□□□□□ -1.47
BRCA2-205ENST00000533776 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.84□□□□□ -1.47
BRCA2-205ENST00000533776 FARP2O94887 1054 aaPredicted RBP5.83□□□□□ -1.48
BRCA2-205ENST00000533776 CEACAM5P06731 702 aa5.83□□□□□ -1.48
BRCA2-205ENST00000533776 GSTT1P30711 240 aa5.83□□□□□ -1.48
BRCA2-205ENST00000533776 IFI16Q16666 785 aaKnown RBP5.83□□□□□ -1.48
BRCA2-205ENST00000533776 PPM1JQ5JR12 505 aa5.83□□□□□ -1.48
BRCA2-205ENST00000533776 CILP2Q8IUL8 1156 aa5.83□□□□□ -1.48
BRCA2-205ENST00000533776 GRIN3AQ8TCU5 1115 aa5.83□□□□□ -1.48
BRCA2-205ENST00000533776 RC3H2Q9HBD1 1191 aaKnown RBP5.83□□□□□ -1.48
BRCA2-205ENST00000533776 DCDC2CA8MYV0 355 aa5.82□□□□□ -1.48
BRCA2-205ENST00000533776 ENC1O14682 589 aa5.82□□□□□ -1.48
BRCA2-205ENST00000533776 PAGE1O75459 146 aa5.82□□□□□ -1.48
BRCA2-205ENST00000533776 FUT4P22083 530 aa5.82□□□□□ -1.48
BRCA2-205ENST00000533776 OXCT1P55809 520 aa5.82□□□□□ -1.48
BRCA2-205ENST00000533776 PRKCQQ04759 706 aa5.82□□□□□ -1.48
BRCA2-205ENST00000533776 PKN1Q16512 942 aa5.82□□□□□ -1.48
BRCA2-205ENST00000533776 AOC3Q16853 763 aa5.82□□□□□ -1.48
BRCA2-205ENST00000533776 ERICH6Q7L0X2 663 aa5.82□□□□□ -1.48
BRCA2-205ENST00000533776 UBE3DQ7Z6J8 389 aa5.82□□□□□ -1.48
BRCA2-205ENST00000533776 HRASLS5Q96KN8 279 aa5.82□□□□□ -1.48
BRCA2-205ENST00000533776 OSBPL7Q9BZF2 842 aa5.82□□□□□ -1.48
BRCA2-205ENST00000533776 VAV3Q9UKW4 847 aa5.82□□□□□ -1.48
BRCA2-205ENST00000533776 PLAGL2Q9UPG8 496 aa5.82□□□□□ -1.48
BRCA2-205ENST00000533776 RNASE1P07998 156 aaKnown RBP5.81□□□□□ -1.48
BRCA2-205ENST00000533776 BMP6P22004 513 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms