RNA–Protein interactions for RNA: ENST00000533685.1

SYVN1-215, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-215ENST00000533685 RNF20Q5VTR2 975 aa14.76□□□□□ -0.05
SYVN1-215ENST00000533685 SAMD7Q7Z3H4 446 aa14.76□□□□□ -0.05
SYVN1-215ENST00000533685 APOBEC3FQ8IUX4 373 aaKnown RBP14.76□□□□□ -0.05
SYVN1-215ENST00000533685 AMOTL1Q8IY63 956 aa14.76□□□□□ -0.05
SYVN1-215ENST00000533685 TGFBRAP1Q8WUH2 860 aa14.76□□□□□ -0.05
SYVN1-215ENST00000533685 SDR42E1Q8WUS8 393 aa14.76□□□□□ -0.05
SYVN1-215ENST00000533685 OSBPL5Q9H0X9 879 aaPredicted RBP14.76□□□□□ -0.05
SYVN1-215ENST00000533685 TAF1DQ9H5J8 278 aaPredicted RBP14.76□□□□□ -0.05
SYVN1-215ENST00000533685 TDRD3Q9H7E2 651 aaKnown RBP14.76□□□□□ -0.05
SYVN1-215ENST00000533685 PGAP2Q9UHJ9 254 aa14.76□□□□□ -0.05
SYVN1-215ENST00000533685 ANAPC4Q9UJX5 808 aa14.76□□□□□ -0.05
SYVN1-215ENST00000533685 FOCADQ5VW36 1801 aa14.76□□□□□ -0.05
SYVN1-215ENST00000533685 ECM29Q5VYK3 1845 aa14.76□□□□□ -0.05
SYVN1-215ENST00000533685 DDX60LQ5H9U9 1706 aaKnown RBP14.75□□□□□ -0.05
SYVN1-215ENST00000533685 ROBO3Q96MS0 1386 aa14.75□□□□□ -0.05
SYVN1-215ENST00000533685 POTECB2RU33 542 aa14.75□□□□□ -0.05
SYVN1-215ENST00000533685 PRKAB2O43741 272 aa14.75□□□□□ -0.05
SYVN1-215ENST00000533685 EGFRP00533 1210 aa14.75□□□□□ -0.05
SYVN1-215ENST00000533685 APPP05067 770 aa14.75□□□□□ -0.05
SYVN1-215ENST00000533685 VEGFAP15692 232 aaPredicted RBP14.75□□□□□ -0.05
SYVN1-215ENST00000533685 TDO2P48775 406 aa14.75□□□□□ -0.05
SYVN1-215ENST00000533685 RBM25P49756 843 aaKnown RBP14.75□□□□□ -0.05
SYVN1-215ENST00000533685 IMMTQ16891 758 aaKnown RBP14.75□□□□□ -0.05
SYVN1-215ENST00000533685 NBPF9Q3BBW0 867 aa14.75□□□□□ -0.05
SYVN1-215ENST00000533685 TRPM4Q8TD43 1214 aa14.75□□□□□ -0.05
SYVN1-215ENST00000533685 FAM151AQ8WW52 585 aa14.75□□□□□ -0.05
SYVN1-215ENST00000533685 FAM198AQ9UFP1 575 aa14.75□□□□□ -0.05
SYVN1-215ENST00000533685 RBM8AQ9Y5S9 174 aaKnown RBP14.75□□□□□ -0.05
SYVN1-215ENST00000533685 ADAMTSL1Q8N6G6 1762 aa14.75□□□□□ -0.05
SYVN1-215ENST00000533685 ZKSCAN1P17029 563 aaPredicted RBP14.74□□□□□ -0.05
SYVN1-215ENST00000533685 HIRAP54198 1017 aaPredicted RBP14.74□□□□□ -0.05
SYVN1-215ENST00000533685 TTC6Q86TZ1 520 aa14.74□□□□□ -0.05
SYVN1-215ENST00000533685 EHD4Q9H223 541 aa14.74□□□□□ -0.05
SYVN1-215ENST00000533685 PCDHAC2Q9Y5I4 1007 aa14.74□□□□□ -0.05
SYVN1-215ENST00000533685 NFIAQ12857 509 aa14.73□□□□□ -0.05
SYVN1-215ENST00000533685 KRT32Q14532 448 aa14.73□□□□□ -0.05
SYVN1-215ENST00000533685 CTR9Q6PD62 1173 aa14.73□□□□□ -0.05
SYVN1-215ENST00000533685 METTL16Q86W50 562 aaKnown RBP14.73□□□□□ -0.05
SYVN1-215ENST00000533685 TBC1D32Q96NH3 1257 aa14.73□□□□□ -0.05
SYVN1-215ENST00000533685 DDX4Q9NQI0 724 aaKnown RBP14.73□□□□□ -0.05
SYVN1-215ENST00000533685 MCM9Q9NXL9 1143 aa14.73□□□□□ -0.05
SYVN1-215ENST00000533685 USP17L12C9JPN9 530 aa14.72□□□□□ -0.05
SYVN1-215ENST00000533685 USP17L21D6R901 530 aa14.72□□□□□ -0.05
SYVN1-215ENST00000533685 ZNF213O14771 459 aa14.72□□□□□ -0.05
SYVN1-215ENST00000533685 HLA-DOAP06340 250 aa14.72□□□□□ -0.05
SYVN1-215ENST00000533685 SLC3A2P08195 630 aaKnown RBP14.72□□□□□ -0.05
SYVN1-215ENST00000533685 FGRP09769 529 aa14.72□□□□□ -0.05
SYVN1-215ENST00000533685 RBM26Q5T8P6 1007 aaKnown RBP14.72□□□□□ -0.05
SYVN1-215ENST00000533685 C12orf60Q5U649 245 aa14.72□□□□□ -0.05
SYVN1-215ENST00000533685 CREB3L3Q68CJ9 461 aa14.72□□□□□ -0.05
SYVN1-215ENST00000533685 MAPKAPK5Q8IW41 473 aa14.72□□□□□ -0.05
SYVN1-215ENST00000533685 HOOK2Q96ED9 719 aa14.72□□□□□ -0.05
SYVN1-215ENST00000533685 C22orf23Q9BZE7 217 aa14.72□□□□□ -0.05
SYVN1-215ENST00000533685 RNF41Q9H4P4 317 aaPredicted RBP14.72□□□□□ -0.05
SYVN1-215ENST00000533685 ZNF287Q9HBT7 754 aa14.72□□□□□ -0.05
SYVN1-215ENST00000533685 GGA3Q9NZ52 723 aa14.72□□□□□ -0.05
SYVN1-215ENST00000533685 PI4KBQ9UBF8 816 aa14.72□□□□□ -0.05
SYVN1-215ENST00000533685 CNTNAP1P78357 1384 aa14.72□□□□□ -0.05
SYVN1-215ENST00000533685 CDK5RAP2Q96SN8 1893 aa14.72□□□□□ -0.05
SYVN1-215ENST00000533685 CLRN2A0PK11 232 aa14.71□□□□□ -0.05
SYVN1-215ENST00000533685 SLC27A2O14975 620 aa14.71□□□□□ -0.05
SYVN1-215ENST00000533685 CYP21A2P08686 494 aa14.71□□□□□ -0.05
SYVN1-215ENST00000533685 PPARAQ07869 468 aa14.71□□□□□ -0.05
SYVN1-215ENST00000533685 PICALMQ13492 652 aa14.71□□□□□ -0.05
SYVN1-215ENST00000533685 ANGEL2Q5VTE6 544 aaKnown RBP14.71□□□□□ -0.05
SYVN1-215ENST00000533685 STAG1Q8WVM7 1258 aa14.71□□□□□ -0.05
SYVN1-215ENST00000533685 NAV1Q8NEY1 1877 aa14.7□□□□□ -0.06
SYVN1-215ENST00000533685 TBC1D12O60347 775 aa14.7□□□□□ -0.06
SYVN1-215ENST00000533685 POLR3DP05423 398 aaPredicted RBP14.7□□□□□ -0.06
SYVN1-215ENST00000533685 MAP3K10Q02779 954 aa14.7□□□□□ -0.06
SYVN1-215ENST00000533685 GABPAQ06546 454 aa14.7□□□□□ -0.06
SYVN1-215ENST00000533685 FOXP4Q8IVH2 680 aaPredicted RBP14.7□□□□□ -0.06
SYVN1-215ENST00000533685 DCPSQ96C86 337 aaKnown RBP14.7□□□□□ -0.06
SYVN1-215ENST00000533685 DEFB129Q9H1M3 183 aa14.7□□□□□ -0.06
SYVN1-215ENST00000533685 CNNM2Q9H8M5 875 aa14.7□□□□□ -0.06
SYVN1-215ENST00000533685 VEZTQ9HBM0 779 aa14.7□□□□□ -0.06
SYVN1-215ENST00000533685 SWAP70Q9UH65 585 aa14.7□□□□□ -0.06
SYVN1-215ENST00000533685 HERC5Q9UII4 1024 aaKnown RBP14.7□□□□□ -0.06
SYVN1-215ENST00000533685 LAMA4Q16363 1823 aa14.7□□□□□ -0.06
SYVN1-215ENST00000533685 TCP10L2B9ZVM9 353 aa14.69□□□□□ -0.06
SYVN1-215ENST00000533685 ORC4O43929 436 aa14.69□□□□□ -0.06
SYVN1-215ENST00000533685 HMGB1P09429 215 aaKnown RBP14.69□□□□□ -0.06
SYVN1-215ENST00000533685 CACNB3P54284 484 aa14.69□□□□□ -0.06
SYVN1-215ENST00000533685 RASA3Q14644 834 aa14.69□□□□□ -0.06
SYVN1-215ENST00000533685 C16orf86Q6ZW13 317 aa14.69□□□□□ -0.06
SYVN1-215ENST00000533685 LDHDQ86WU2 507 aa14.69□□□□□ -0.06
SYVN1-215ENST00000533685 SULF1Q8IWU6 871 aa14.69□□□□□ -0.06
SYVN1-215ENST00000533685 TEPSINQ96N21 525 aa14.69□□□□□ -0.06
SYVN1-215ENST00000533685 TM6SF1Q9BZW5 370 aa14.69□□□□□ -0.06
SYVN1-215ENST00000533685 SERPINB13Q9UIV8 391 aa14.69□□□□□ -0.06
SYVN1-215ENST00000533685 PALD1Q9ULE6 856 aa14.69□□□□□ -0.06
SYVN1-215ENST00000533685 LAMB1P07942 1786 aa14.68□□□□□ -0.06
SYVN1-215ENST00000533685 PSMA5P28066 241 aa14.68□□□□□ -0.06
SYVN1-215ENST00000533685 PLCD1P51178 756 aa14.68□□□□□ -0.06
SYVN1-215ENST00000533685 PDE4BQ07343 736 aa14.68□□□□□ -0.06
SYVN1-215ENST00000533685 TCP10Q12799 353 aa14.68□□□□□ -0.06
SYVN1-215ENST00000533685 AKNAD1Q5T1N1 836 aa14.68□□□□□ -0.06
SYVN1-215ENST00000533685 SH3BP5LQ7L8J4 393 aa14.68□□□□□ -0.06
SYVN1-215ENST00000533685 CSRNP1Q96S65 589 aa14.68□□□□□ -0.06
SYVN1-215ENST00000533685 MTA3Q9BTC8 594 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms