RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 NSUN4Q96CB9 384 aaKnown RBP18.96■□□□□ 0.63
CPSF1-211ENST00000533492 DBNDD2Q9BQY9 259 aa18.96■□□□□ 0.63
CPSF1-211ENST00000533492 SOX10P56693 466 aa18.95■□□□□ 0.62
CPSF1-211ENST00000533492 CEP85Q6P2H3 762 aa18.95■□□□□ 0.62
CPSF1-211ENST00000533492 FAM43AQ8N2R8 423 aa18.95■□□□□ 0.62
CPSF1-211ENST00000533492 NOL10Q9BSC4 688 aaKnown RBP18.95■□□□□ 0.62
CPSF1-211ENST00000533492 SNRKQ9NRH2 765 aa18.95■□□□□ 0.62
CPSF1-211ENST00000533492 OTOP1Q7RTM1 612 aa18.94■□□□□ 0.62
CPSF1-211ENST00000533492 CD99L2Q8TCZ2 262 aa18.94■□□□□ 0.62
CPSF1-211ENST00000533492 ZNF384Q8TF68 577 aa18.94■□□□□ 0.62
CPSF1-211ENST00000533492 MAP4K4O95819 1239 aaPredicted RBP18.93■□□□□ 0.62
CPSF1-211ENST00000533492 RHBDL3P58872 404 aa18.93■□□□□ 0.62
CPSF1-211ENST00000533492 ARHGEF6Q15052 776 aa18.93■□□□□ 0.62
CPSF1-211ENST00000533492 NOL9Q5SY16 702 aaKnown RBP18.93■□□□□ 0.62
CPSF1-211ENST00000533492 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.93■□□□□ 0.62
CPSF1-211ENST00000533492 CCDC8Q9H0W5 538 aaPredicted RBP18.93■□□□□ 0.62
CPSF1-211ENST00000533492 EFCC1Q9HA90 598 aa18.93■□□□□ 0.62
CPSF1-211ENST00000533492 ZCCHC17Q9NP64 241 aaKnown RBP18.93■□□□□ 0.62
CPSF1-211ENST00000533492 DDX4Q9NQI0 724 aaKnown RBP18.93■□□□□ 0.62
CPSF1-211ENST00000533492 DDTLA6NHG4 134 aaPredicted RBP18.92■□□□□ 0.62
CPSF1-211ENST00000533492 BTBD19C9JJ37 291 aa18.92■□□□□ 0.62
CPSF1-211ENST00000533492 NAA16Q6N069 864 aaPredicted RBP18.92■□□□□ 0.62
CPSF1-211ENST00000533492 SH3BP5LQ7L8J4 393 aa18.92■□□□□ 0.62
CPSF1-211ENST00000533492 ERC1Q8IUD2 1116 aa18.92■□□□□ 0.62
CPSF1-211ENST00000533492 PICK1Q9NRD5 415 aa18.92■□□□□ 0.62
CPSF1-211ENST00000533492 NPM3O75607 178 aaKnown RBP18.91■□□□□ 0.62
CPSF1-211ENST00000533492 BAG3O95817 575 aa18.91■□□□□ 0.62
CPSF1-211ENST00000533492 HSP90AB4PQ58FF6 505 aa18.91■□□□□ 0.62
CPSF1-211ENST00000533492 ZNF512BQ96KM6 892 aaPredicted RBP18.91■□□□□ 0.62
CPSF1-211ENST00000533492 DBNLQ9UJU6 430 aaKnown RBP18.91■□□□□ 0.62
CPSF1-211ENST00000533492 RCAN3Q9UKA8 241 aa18.91■□□□□ 0.62
CPSF1-211ENST00000533492 DDX19BQ9UMR2 479 aa18.91■□□□□ 0.62
CPSF1-211ENST00000533492 EXOC6BQ9Y2D4 811 aa18.91■□□□□ 0.62
CPSF1-211ENST00000533492 RFX7Q2KHR2 1363 aa18.91■□□□□ 0.62
CPSF1-211ENST00000533492 PHF20L1A8MW92 1017 aa18.9■□□□□ 0.62
CPSF1-211ENST00000533492 TLR2O60603 784 aa18.9■□□□□ 0.62
CPSF1-211ENST00000533492 CYP2E1P05181 493 aaPredicted RBP18.9■□□□□ 0.62
CPSF1-211ENST00000533492 MAP3K10Q02779 954 aa18.9■□□□□ 0.62
CPSF1-211ENST00000533492 TEX11Q8IYF3 940 aa18.9■□□□□ 0.62
CPSF1-211ENST00000533492 SCYL3Q8IZE3 742 aa18.9■□□□□ 0.62
CPSF1-211ENST00000533492 EAF2Q96CJ1 260 aaPredicted RBP18.9■□□□□ 0.62
CPSF1-211ENST00000533492 CHMP4BQ9H444 224 aaKnown RBP18.9■□□□□ 0.62
CPSF1-211ENST00000533492 KCNH4Q9UQ05 1017 aa18.9■□□□□ 0.62
CPSF1-211ENST00000533492 COG6Q9Y2V7 657 aa18.9■□□□□ 0.62
CPSF1-211ENST00000533492 DOCK2Q92608 1830 aa18.89■□□□□ 0.61
CPSF1-211ENST00000533492 CXCL11O14625 94 aa18.89■□□□□ 0.61
CPSF1-211ENST00000533492 CTNND1O60716 968 aaKnown RBP18.89■□□□□ 0.61
CPSF1-211ENST00000533492 PLCG2P16885 1265 aa18.89■□□□□ 0.61
CPSF1-211ENST00000533492 ZAP70P43403 619 aa18.89■□□□□ 0.61
CPSF1-211ENST00000533492 ANKRD23Q86SG2 305 aa18.89■□□□□ 0.61
CPSF1-211ENST00000533492 TLR7Q9NYK1 1049 aaKnown RBP18.89■□□□□ 0.61
CPSF1-211ENST00000533492 PTPN22Q9Y2R2 807 aa18.89■□□□□ 0.61
CPSF1-211ENST00000533492 ZHX2Q9Y6X8 837 aa18.89■□□□□ 0.61
CPSF1-211ENST00000533492 ATRNL1Q5VV63 1379 aa18.89■□□□□ 0.61
CPSF1-211ENST00000533492 IGSF3O75054 1194 aa18.88■□□□□ 0.61
CPSF1-211ENST00000533492 HMMRO75330 724 aa18.88■□□□□ 0.61
CPSF1-211ENST00000533492 KIF22Q14807 665 aa18.88■□□□□ 0.61
CPSF1-211ENST00000533492 AACSQ86V21 672 aa18.88■□□□□ 0.61
CPSF1-211ENST00000533492 RPAP2Q8IXW5 612 aaPredicted RBP18.88■□□□□ 0.61
CPSF1-211ENST00000533492 OSBPL5Q9H0X9 879 aaPredicted RBP18.88■□□□□ 0.61
CPSF1-211ENST00000533492 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.88■□□□□ 0.61
CPSF1-211ENST00000533492 AATFQ9NY61 560 aaKnown RBP eCLIP18.88■□□□□ 0.61
CPSF1-211ENST00000533492 PDHXO00330 501 aa18.87■□□□□ 0.61
CPSF1-211ENST00000533492 TBC1D12O60347 775 aa18.87■□□□□ 0.61
CPSF1-211ENST00000533492 SLURP2P0DP57 97 aa18.87■□□□□ 0.61
CPSF1-211ENST00000533492 PTPRAP18433 802 aa18.87■□□□□ 0.61
CPSF1-211ENST00000533492 SH3RF3Q8TEJ3 882 aaPredicted RBP18.87■□□□□ 0.61
CPSF1-211ENST00000533492 PPP4CP60510 307 aa18.86■□□□□ 0.61
CPSF1-211ENST00000533492 FASTKD5Q7L8L6 764 aaKnown RBP18.86■□□□□ 0.61
CPSF1-211ENST00000533492 PIH1D3Q9NQM4 214 aaKnown RBP18.86■□□□□ 0.61
CPSF1-211ENST00000533492 APBB1O00213 710 aa18.85■□□□□ 0.61
CPSF1-211ENST00000533492 IDH1O75874 414 aaKnown RBP18.85■□□□□ 0.61
CPSF1-211ENST00000533492 RHPN1Q8TCX5 695 aa18.85■□□□□ 0.61
CPSF1-211ENST00000533492 IL1RAPL2Q9NP60 686 aa18.85■□□□□ 0.61
CPSF1-211ENST00000533492 ZBTB40Q9NUA8 1239 aa18.85■□□□□ 0.61
CPSF1-211ENST00000533492 AFG3L2Q9Y4W6 797 aa18.85■□□□□ 0.61
CPSF1-211ENST00000533492 FAM196BA6NMK8 535 aa18.84■□□□□ 0.61
CPSF1-211ENST00000533492 CYP7A1P22680 504 aa18.84■□□□□ 0.61
CPSF1-211ENST00000533492 LACTBP83111 547 aaPredicted RBP18.84■□□□□ 0.61
CPSF1-211ENST00000533492 CAP1Q01518 475 aa18.84■□□□□ 0.61
CPSF1-211ENST00000533492 CLASRPQ8N2M8 674 aaKnown RBP18.84■□□□□ 0.61
CPSF1-211ENST00000533492 TGFBRAP1Q8WUH2 860 aa18.84■□□□□ 0.61
CPSF1-211ENST00000533492 KIF1BPQ96EK5 621 aa18.84■□□□□ 0.61
CPSF1-211ENST00000533492 BCL11AQ9H165 835 aa18.84■□□□□ 0.61
CPSF1-211ENST00000533492 DHX36Q9H2U1 1008 aaKnown RBP18.84■□□□□ 0.61
CPSF1-211ENST00000533492 PI4KBQ9UBF8 816 aa18.84■□□□□ 0.61
CPSF1-211ENST00000533492 CPA4Q9UI42 421 aa18.84■□□□□ 0.61
CPSF1-211ENST00000533492 A0A0G2JLL6 359 aaPredicted RBP18.83■□□□□ 0.6
CPSF1-211ENST00000533492 MAP3K12Q12852 859 aa18.83■□□□□ 0.6
CPSF1-211ENST00000533492 MOGSQ13724 837 aa18.83■□□□□ 0.6
CPSF1-211ENST00000533492 C17orf99Q6UX52 265 aa18.83■□□□□ 0.6
CPSF1-211ENST00000533492 GADL1Q6ZQY3 521 aa18.83■□□□□ 0.6
CPSF1-211ENST00000533492 PRRT2Q7Z6L0 340 aaPredicted RBP18.83■□□□□ 0.6
CPSF1-211ENST00000533492 ADGRA1Q86SQ6 560 aa18.83■□□□□ 0.6
CPSF1-211ENST00000533492 MAPKAPK5Q8IW41 473 aa18.83■□□□□ 0.6
CPSF1-211ENST00000533492 PARK7Q99497 189 aaKnown RBP18.83■□□□□ 0.6
CPSF1-211ENST00000533492 HERC5Q9UII4 1024 aaKnown RBP18.83■□□□□ 0.6
CPSF1-211ENST00000533492 COL2A1P02458 1487 aaPredicted RBP18.83■□□□□ 0.6
CPSF1-211ENST00000533492 TRIM75PA6NK02 468 aa18.82■□□□□ 0.6
CPSF1-211ENST00000533492 ECM2O94769 699 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms