RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 KRT40Q6A162 431 aa22.4■■□□□ 1.18
UBXN1-215ENST00000533476 ADGRA1Q86SQ6 560 aa22.4■■□□□ 1.18
UBXN1-215ENST00000533476 PHKBQ93100 1093 aa22.4■■□□□ 1.18
UBXN1-215ENST00000533476 AIFM3Q96NN9 605 aa22.4■■□□□ 1.18
UBXN1-215ENST00000533476 GTF2E1P29083 439 aaPredicted RBP22.39■■□□□ 1.18
UBXN1-215ENST00000533476 BICDL1Q6ZP65 573 aa22.39■■□□□ 1.18
UBXN1-215ENST00000533476 FNBP4Q8N3X1 1017 aaPredicted RBP22.39■■□□□ 1.18
UBXN1-215ENST00000533476 MPNDQ8N594 471 aa22.39■■□□□ 1.18
UBXN1-215ENST00000533476 PIBF1Q8WXW3 757 aa22.39■■□□□ 1.18
UBXN1-215ENST00000533476 TTC12Q9H892 705 aaPredicted RBP22.39■■□□□ 1.18
UBXN1-215ENST00000533476 RAI14Q9P0K7 980 aa22.39■■□□□ 1.18
UBXN1-215ENST00000533476 RGS17Q9UGC6 210 aaPredicted RBP22.39■■□□□ 1.18
UBXN1-215ENST00000533476 MAGEB6P1A0A0J9YX57 407 aa22.39■■□□□ 1.17
UBXN1-215ENST00000533476 VPS37DQ86XT2 251 aa22.39■■□□□ 1.17
UBXN1-215ENST00000533476 CCDC144CPQ8IYA2 1237 aa22.39■■□□□ 1.17
UBXN1-215ENST00000533476 CELF1Q92879 486 aaKnown RBP22.39■■□□□ 1.17
UBXN1-215ENST00000533476 ZNF830Q96NB3 372 aaPredicted RBP22.39■■□□□ 1.17
UBXN1-215ENST00000533476 MYL10Q9BUA6 226 aa22.39■■□□□ 1.17
UBXN1-215ENST00000533476 ABCF2Q9UG63 623 aa22.39■■□□□ 1.17
UBXN1-215ENST00000533476 ANAPC4Q9UJX5 808 aa22.39■■□□□ 1.17
UBXN1-215ENST00000533476 RCAN1P53805 252 aa22.38■■□□□ 1.17
UBXN1-215ENST00000533476 PPARAQ07869 468 aa22.38■■□□□ 1.17
UBXN1-215ENST00000533476 SEMA3EO15041 775 aa22.37■■□□□ 1.17
UBXN1-215ENST00000533476 FMNL1O95466 1100 aaPredicted RBP22.37■■□□□ 1.17
UBXN1-215ENST00000533476 IFNAR1P17181 557 aa22.37■■□□□ 1.17
UBXN1-215ENST00000533476 WTAPQ15007 396 aa22.37■■□□□ 1.17
UBXN1-215ENST00000533476 IQCB1Q15051 598 aa22.37■■□□□ 1.17
UBXN1-215ENST00000533476 PTF1AQ7RTS3 328 aa22.37■■□□□ 1.17
UBXN1-215ENST00000533476 PLA2G4DQ86XP0 818 aa22.37■■□□□ 1.17
UBXN1-215ENST00000533476 FAM84BQ96KN1 310 aaPredicted RBP22.37■■□□□ 1.17
UBXN1-215ENST00000533476 PDS5AQ29RF7 1337 aaKnown RBP22.37■■□□□ 1.17
UBXN1-215ENST00000533476 WTIPA6NIX2 430 aaPredicted RBP22.37■■□□□ 1.17
UBXN1-215ENST00000533476 NDUFA8P51970 172 aa22.37■■□□□ 1.17
UBXN1-215ENST00000533476 SSRP1Q08945 709 aaKnown RBP22.37■■□□□ 1.17
UBXN1-215ENST00000533476 TRIM29Q14134 588 aa22.37■■□□□ 1.17
UBXN1-215ENST00000533476 RRP12Q5JTH9 1297 aaKnown RBP22.37■■□□□ 1.17
UBXN1-215ENST00000533476 C11orf57Q6ZUT1 292 aaPredicted RBP22.37■■□□□ 1.17
UBXN1-215ENST00000533476 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.37■■□□□ 1.17
UBXN1-215ENST00000533476 TMTC2Q8N394 836 aa22.37■■□□□ 1.17
UBXN1-215ENST00000533476 WASF1Q92558 559 aa22.37■■□□□ 1.17
UBXN1-215ENST00000533476 SETDB2Q96T68 719 aa22.37■■□□□ 1.17
UBXN1-215ENST00000533476 RIOK1Q9BRS2 568 aaKnown RBP22.37■■□□□ 1.17
UBXN1-215ENST00000533476 A0A1B0GVL5 298 aa22.36■■□□□ 1.17
UBXN1-215ENST00000533476 U2AF2P26368 475 aaKnown RBP eCLIP22.36■■□□□ 1.175e-8■■■□□ 16.8
UBXN1-215ENST00000533476 ZNF75DP51815 510 aa22.36■■□□□ 1.17
UBXN1-215ENST00000533476 SLC39A14Q15043 492 aa22.36■■□□□ 1.17
UBXN1-215ENST00000533476 FBXO33Q7Z6M2 555 aa22.36■■□□□ 1.17
UBXN1-215ENST00000533476 TOMM22Q9NS69 142 aa22.36■■□□□ 1.17
UBXN1-215ENST00000533476 ANO10Q9NW15 660 aa22.36■■□□□ 1.17
UBXN1-215ENST00000533476 ERICH2A1L162 156 aa22.35■■□□□ 1.17
UBXN1-215ENST00000533476 AXDND1Q5T1B0 1012 aaPredicted RBP22.35■■□□□ 1.17
UBXN1-215ENST00000533476 SRP68Q9UHB9 627 aaKnown RBP22.35■■□□□ 1.17
UBXN1-215ENST00000533476 CMA1P23946 247 aa22.35■■□□□ 1.17
UBXN1-215ENST00000533476 RPS8P62241 208 aaKnown RBP22.35■■□□□ 1.17
UBXN1-215ENST00000533476 RTN1Q16799 776 aa22.35■■□□□ 1.17
UBXN1-215ENST00000533476 NBPF5PQ86XG9 351 aaPredicted RBP22.35■■□□□ 1.17
UBXN1-215ENST00000533476 SPC24Q8NBT2 197 aa22.35■■□□□ 1.17
UBXN1-215ENST00000533476 SDR42E1Q8WUS8 393 aa22.35■■□□□ 1.17
UBXN1-215ENST00000533476 NLRP3Q96P20 1036 aa22.35■■□□□ 1.17
UBXN1-215ENST00000533476 SLC26A6Q9BXS9 759 aa22.35■■□□□ 1.17
UBXN1-215ENST00000533476 DUOX1Q9NRD9 1551 aa22.34■■□□□ 1.17
UBXN1-215ENST00000533476 MYH13Q9UKX3 1938 aa22.34■■□□□ 1.17
UBXN1-215ENST00000533476 GNPATO15228 680 aa22.34■■□□□ 1.17
UBXN1-215ENST00000533476 ZPR1O75312 459 aa22.34■■□□□ 1.17
UBXN1-215ENST00000533476 GNL2Q13823 731 aaKnown RBP22.34■■□□□ 1.17
UBXN1-215ENST00000533476 SMIM5Q71RC9 77 aa22.34■■□□□ 1.17
UBXN1-215ENST00000533476 UBE2Q2Q8WVN8 375 aa22.34■■□□□ 1.17
UBXN1-215ENST00000533476 BRIP1Q9BX63 1249 aa22.34■■□□□ 1.17
UBXN1-215ENST00000533476 QTRT2Q9H974 415 aaKnown RBP22.34■■□□□ 1.17
UBXN1-215ENST00000533476 PPP6R2O75170 966 aa22.33■■□□□ 1.17
UBXN1-215ENST00000533476 SARM1Q6SZW1 724 aa22.33■■□□□ 1.17
UBXN1-215ENST00000533476 SDF4Q9BRK5 362 aa22.33■■□□□ 1.17
UBXN1-215ENST00000533476 ZKSCAN3Q9BRR0 538 aa22.33■■□□□ 1.17
UBXN1-215ENST00000533476 TRIM5Q9C035 493 aa22.33■■□□□ 1.17
UBXN1-215ENST00000533476 ANKRD2Q9GZV1 360 aa22.33■■□□□ 1.17
UBXN1-215ENST00000533476 KCNF1Q9H3M0 494 aa22.33■■□□□ 1.17
UBXN1-215ENST00000533476 SPTLC3Q9NUV7 552 aa22.33■■□□□ 1.17
UBXN1-215ENST00000533476 MAST2Q6P0Q8 1798 aa22.33■■□□□ 1.17
UBXN1-215ENST00000533476 LY75O60449 1722 aa22.33■■□□□ 1.16
UBXN1-215ENST00000533476 CCDC196A0A1B0GTZ2 297 aa22.33■■□□□ 1.16
UBXN1-215ENST00000533476 GOLGA6L19H0YKK7 550 aa22.33■■□□□ 1.16
UBXN1-215ENST00000533476 DYNC1I1O14576 645 aa22.33■■□□□ 1.16
UBXN1-215ENST00000533476 CDC25BP30305 580 aa22.33■■□□□ 1.16
UBXN1-215ENST00000533476 JMYQ8N9B5 988 aa22.33■■□□□ 1.16
UBXN1-215ENST00000533476 ESR2Q92731 530 aa22.33■■□□□ 1.16
UBXN1-215ENST00000533476 UBAC1Q9BSL1 405 aa22.33■■□□□ 1.16
UBXN1-215ENST00000533476 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.33■■□□□ 1.16
UBXN1-215ENST00000533476 PDCL3Q9H2J4 239 aa22.33■■□□□ 1.16
UBXN1-215ENST00000533476 CCNL1Q9UK58 526 aaPredicted RBP22.33■■□□□ 1.16
UBXN1-215ENST00000533476 TAF1LQ8IZX4 1826 aa22.33■■□□□ 1.16
UBXN1-215ENST00000533476 EP400Q96L91 3159 aa22.33■■□□□ 1.16
UBXN1-215ENST00000533476 NOLC1Q14978 699 aaKnown RBP eCLIP22.32■■□□□ 1.16
UBXN1-215ENST00000533476 PTPAQ15257 358 aa22.32■■□□□ 1.16
UBXN1-215ENST00000533476 POTEAQ6S8J7 498 aa22.32■■□□□ 1.16
UBXN1-215ENST00000533476 TRIM22Q8IYM9 498 aa22.32■■□□□ 1.16
UBXN1-215ENST00000533476 CEP57L1Q8IYX8 460 aa22.32■■□□□ 1.16
UBXN1-215ENST00000533476 MINDY4BA8MYZ0 360 aa22.31■■□□□ 1.16
UBXN1-215ENST00000533476 TPTE2Q6XPS3 522 aa22.31■■□□□ 1.16
UBXN1-215ENST00000533476 ZNF654Q8IZM8 581 aa22.31■■□□□ 1.16
UBXN1-215ENST00000533476 ZNF384Q8TF68 577 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms