RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 DOCK1Q14185 1865 aa13.94□□□□□ -0.18
CLCF1-202ENST00000533438 TAF1CQ15572 869 aaPredicted RBP13.94□□□□□ -0.18
CLCF1-202ENST00000533438 HABP4Q5JVS0 413 aaKnown RBP13.94□□□□□ -0.18
CLCF1-202ENST00000533438 ERICH6Q7L0X2 663 aa13.94□□□□□ -0.18
CLCF1-202ENST00000533438 SH3BP5LQ7L8J4 393 aa13.94□□□□□ -0.18
CLCF1-202ENST00000533438 FTSJ3Q8IY81 847 aaKnown RBP13.94□□□□□ -0.18
CLCF1-202ENST00000533438 ZCCHC17Q9NP64 241 aaKnown RBP13.94□□□□□ -0.18
CLCF1-202ENST00000533438 GPR108Q9NPR9 543 aa13.94□□□□□ -0.18
CLCF1-202ENST00000533438 ZSWIM8A7E2V4 1837 aa13.94□□□□□ -0.18
CLCF1-202ENST00000533438 PTPRFP10586 1907 aa13.94□□□□□ -0.18
CLCF1-202ENST00000533438 RBBP6Q7Z6E9 1792 aaKnown RBP13.94□□□□□ -0.18
CLCF1-202ENST00000533438 CDK5RAP2Q96SN8 1893 aa13.93□□□□□ -0.18
CLCF1-202ENST00000533438 BRCA2P51587 3418 aa13.93□□□□□ -0.18
CLCF1-202ENST00000533438 GPR75-ASB3A0A0A6YYF3 556 aa13.93□□□□□ -0.18
CLCF1-202ENST00000533438 BTBD19C9JJ37 291 aa13.93□□□□□ -0.18
CLCF1-202ENST00000533438 MAP3K10Q02779 954 aa13.93□□□□□ -0.18
CLCF1-202ENST00000533438 ITPRIPQ8IWB1 547 aa13.93□□□□□ -0.18
CLCF1-202ENST00000533438 NSUN4Q96CB9 384 aaKnown RBP13.93□□□□□ -0.18
CLCF1-202ENST00000533438 C1orf115Q9H7X2 142 aa13.93□□□□□ -0.18
CLCF1-202ENST00000533438 ZFYVE28Q9HCC9 887 aa13.93□□□□□ -0.18
CLCF1-202ENST00000533438 DDX4Q9NQI0 724 aaKnown RBP13.93□□□□□ -0.18
CLCF1-202ENST00000533438 KCNH4Q9UQ05 1017 aa13.93□□□□□ -0.18
CLCF1-202ENST00000533438 FOCADQ5VW36 1801 aa13.92□□□□□ -0.18
CLCF1-202ENST00000533438 POTEFA5A3E0 1075 aa13.92□□□□□ -0.18
CLCF1-202ENST00000533438 DDTLA6NHG4 134 aaPredicted RBP13.92□□□□□ -0.18
CLCF1-202ENST00000533438 PHF20L1A8MW92 1017 aa13.92□□□□□ -0.18
CLCF1-202ENST00000533438 UQCRFS1P1P0C7P4 283 aa13.92□□□□□ -0.18
CLCF1-202ENST00000533438 RHBDL3P58872 404 aa13.92□□□□□ -0.18
CLCF1-202ENST00000533438 TNNI3KQ59H18 835 aa13.92□□□□□ -0.18
CLCF1-202ENST00000533438 GORABQ5T7V8 394 aa13.92□□□□□ -0.18
CLCF1-202ENST00000533438 TBC1D9Q6ZT07 1266 aa13.92□□□□□ -0.18
CLCF1-202ENST00000533438 NOP58Q9Y2X3 529 aaKnown RBP13.92□□□□□ -0.18
CLCF1-202ENST00000533438 FPGT-TNNI3KV9GXZ4 949 aa13.92□□□□□ -0.18
CLCF1-202ENST00000533438 TLR2O60603 784 aa13.91□□□□□ -0.18
CLCF1-202ENST00000533438 NPM3O75607 178 aaKnown RBP13.91□□□□□ -0.18
CLCF1-202ENST00000533438 SURF6O75683 361 aaKnown RBP13.91□□□□□ -0.18
CLCF1-202ENST00000533438 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.91□□□□□ -0.18
CLCF1-202ENST00000533438 EFCC1Q9HA90 598 aa13.91□□□□□ -0.18
CLCF1-202ENST00000533438 ATAD5Q96QE3 1844 aa13.91□□□□□ -0.18
CLCF1-202ENST00000533438 COL2A1P02458 1487 aaPredicted RBP13.91□□□□□ -0.18
CLCF1-202ENST00000533438 SIPA1L1O43166 1804 aa13.9□□□□□ -0.18
CLCF1-202ENST00000533438 MAP4K4O95819 1239 aaPredicted RBP13.9□□□□□ -0.18
CLCF1-202ENST00000533438 LDHCP07864 332 aa13.9□□□□□ -0.18
CLCF1-202ENST00000533438 GSTO1P78417 241 aa13.9□□□□□ -0.18
CLCF1-202ENST00000533438 PICALMQ13492 652 aa13.9□□□□□ -0.18
CLCF1-202ENST00000533438 MOGSQ13724 837 aa13.9□□□□□ -0.18
CLCF1-202ENST00000533438 ANKRD23Q86SG2 305 aa13.9□□□□□ -0.18
CLCF1-202ENST00000533438 DBNDD2Q9BQY9 259 aa13.9□□□□□ -0.18
CLCF1-202ENST00000533438 SLURP2P0DP57 97 aa13.89□□□□□ -0.19
CLCF1-202ENST00000533438 CCDC158Q5M9N0 1113 aa13.89□□□□□ -0.19
CLCF1-202ENST00000533438 TTC39AQ5SRH9 613 aa13.89□□□□□ -0.19
CLCF1-202ENST00000533438 CEP85Q6P2H3 762 aa13.89□□□□□ -0.19
CLCF1-202ENST00000533438 ZSCAN29Q8IWY8 852 aaPredicted RBP13.89□□□□□ -0.19
CLCF1-202ENST00000533438 SCYL3Q8IZE3 742 aa13.89□□□□□ -0.19
CLCF1-202ENST00000533438 ZNF512BQ96KM6 892 aaPredicted RBP13.89□□□□□ -0.19
CLCF1-202ENST00000533438 RAI14Q9P0K7 980 aa13.89□□□□□ -0.19
CLCF1-202ENST00000533438 ADGRA2Q96PE1 1338 aa13.89□□□□□ -0.19
CLCF1-202ENST00000533438 CXCL11O14625 94 aa13.88□□□□□ -0.19
CLCF1-202ENST00000533438 PTPRAP18433 802 aa13.88□□□□□ -0.19
CLCF1-202ENST00000533438 OS9Q13438 667 aaPredicted RBP13.88□□□□□ -0.19
CLCF1-202ENST00000533438 C17orf99Q6UX52 265 aa13.88□□□□□ -0.19
CLCF1-202ENST00000533438 PANK1Q8TE04 598 aa13.88□□□□□ -0.19
CLCF1-202ENST00000533438 LRP2BPQ9P2M1 347 aa13.88□□□□□ -0.19
CLCF1-202ENST00000533438 MGAMO43451 1857 aa13.88□□□□□ -0.19
CLCF1-202ENST00000533438 PDHXO00330 501 aa13.87□□□□□ -0.19
CLCF1-202ENST00000533438 TBC1D12O60347 775 aa13.87□□□□□ -0.19
CLCF1-202ENST00000533438 CTNND1O60716 968 aaKnown RBP13.87□□□□□ -0.19
CLCF1-202ENST00000533438 CYP2E1P05181 493 aaPredicted RBP13.87□□□□□ -0.19
CLCF1-202ENST00000533438 LACTBP83111 547 aaPredicted RBP13.87□□□□□ -0.19
CLCF1-202ENST00000533438 ARHGEF6Q15052 776 aa13.87□□□□□ -0.19
CLCF1-202ENST00000533438 EAF2Q96CJ1 260 aaPredicted RBP13.87□□□□□ -0.19
CLCF1-202ENST00000533438 ZNF333Q96JL9 665 aa13.87□□□□□ -0.19
CLCF1-202ENST00000533438 ARHGAP39Q9C0H5 1083 aa13.87□□□□□ -0.19
CLCF1-202ENST00000533438 OSBPL5Q9H0X9 879 aaPredicted RBP13.87□□□□□ -0.19
CLCF1-202ENST00000533438 SNRKQ9NRH2 765 aa13.87□□□□□ -0.19
CLCF1-202ENST00000533438 TLR7Q9NYK1 1049 aaKnown RBP13.87□□□□□ -0.19
CLCF1-202ENST00000533438 DBNLQ9UJU6 430 aaKnown RBP13.87□□□□□ -0.19
CLCF1-202ENST00000533438 AFG3L2Q9Y4W6 797 aa13.87□□□□□ -0.19
CLCF1-202ENST00000533438 A0A0G2JLL6 359 aaPredicted RBP13.86□□□□□ -0.19
CLCF1-202ENST00000533438 IGSF3O75054 1194 aa13.86□□□□□ -0.19
CLCF1-202ENST00000533438 EN2P19622 333 aaPredicted RBP13.86□□□□□ -0.19
CLCF1-202ENST00000533438 FXR1P51114 621 aaKnown RBP eCLIP13.86□□□□□ -0.19
CLCF1-202ENST00000533438 NAA16Q6N069 864 aaPredicted RBP13.86□□□□□ -0.19
CLCF1-202ENST00000533438 GPAT2Q6NUI2 795 aa13.86□□□□□ -0.19
CLCF1-202ENST00000533438 PRRT2Q7Z6L0 340 aaPredicted RBP13.86□□□□□ -0.19
CLCF1-202ENST00000533438 PICK1Q9NRD5 415 aa13.86□□□□□ -0.19
CLCF1-202ENST00000533438 PTCH2Q9Y6C5 1203 aa13.86□□□□□ -0.19
CLCF1-202ENST00000533438 ZHX2Q9Y6X8 837 aa13.86□□□□□ -0.19
CLCF1-202ENST00000533438 LOC285556D6RIA3 1793 aa13.86□□□□□ -0.19
CLCF1-202ENST00000533438 ZAP70P43403 619 aa13.85□□□□□ -0.19
CLCF1-202ENST00000533438 PPP4CP60510 307 aa13.85□□□□□ -0.19
CLCF1-202ENST00000533438 ADGRA1Q86SQ6 560 aa13.85□□□□□ -0.19
CLCF1-202ENST00000533438 TEX11Q8IYF3 940 aa13.85□□□□□ -0.19
CLCF1-202ENST00000533438 SH3RF3Q8TEJ3 882 aaPredicted RBP13.85□□□□□ -0.19
CLCF1-202ENST00000533438 CCDC8Q9H0W5 538 aaPredicted RBP13.85□□□□□ -0.19
CLCF1-202ENST00000533438 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.85□□□□□ -0.19
CLCF1-202ENST00000533438 CPA4Q9UI42 421 aa13.85□□□□□ -0.19
CLCF1-202ENST00000533438 FAM196BA6NMK8 535 aa13.84□□□□□ -0.19
CLCF1-202ENST00000533438 GNRH1P01148 92 aa13.84□□□□□ -0.19
CLCF1-202ENST00000533438 MS4A1P11836 297 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms