RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 BICDL1Q6ZP65 573 aa17.8■□□□□ 0.44
CACNA1E-208ENST00000533229 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.8■□□□□ 0.44
CACNA1E-208ENST00000533229 NACAP1Q9BZK3 213 aa17.8■□□□□ 0.44
CACNA1E-208ENST00000533229 KRT23Q9C075 422 aa17.8■□□□□ 0.44
CACNA1E-208ENST00000533229 CNNM2Q9H8M5 875 aa17.8■□□□□ 0.44
CACNA1E-208ENST00000533229 TOMM22Q9NS69 142 aa17.8■□□□□ 0.44
CACNA1E-208ENST00000533229 ANO10Q9NW15 660 aa17.8■□□□□ 0.44
CACNA1E-208ENST00000533229 PHLPP1O60346 1717 aa17.8■□□□□ 0.44
CACNA1E-208ENST00000533229 MROH7-TTC4A0A0A0MT08 1334 aa17.8■□□□□ 0.44
CACNA1E-208ENST00000533229 CCDC69A6NI79 296 aa17.8■□□□□ 0.44
CACNA1E-208ENST00000533229 ZNF202O95125 648 aa17.8■□□□□ 0.44
CACNA1E-208ENST00000533229 SF3B3Q15393 1217 aaKnown RBP17.8■□□□□ 0.44
CACNA1E-208ENST00000533229 SARM1Q6SZW1 724 aa17.8■□□□□ 0.44
CACNA1E-208ENST00000533229 ANKRD18AQ8IVF6 992 aa17.8■□□□□ 0.44
CACNA1E-208ENST00000533229 SLC26A6Q9BXS9 759 aa17.8■□□□□ 0.44
CACNA1E-208ENST00000533229 KIAA1468Q9P260 1216 aa17.8■□□□□ 0.44
CACNA1E-208ENST00000533229 CLIP2Q9UDT6 1046 aa17.8■□□□□ 0.44
CACNA1E-208ENST00000533229 DOCK2Q92608 1830 aa17.79■□□□□ 0.44
CACNA1E-208ENST00000533229 PFKFB1P16118 471 aa17.79■□□□□ 0.44
CACNA1E-208ENST00000533229 U2AF2P26368 475 aaKnown RBP eCLIP17.79■□□□□ 0.44
CACNA1E-208ENST00000533229 PTPAQ15257 358 aa17.79■□□□□ 0.44
CACNA1E-208ENST00000533229 CELF1Q92879 486 aaKnown RBP17.79■□□□□ 0.44
CACNA1E-208ENST00000533229 MAP3K14Q99558 947 aa17.79■□□□□ 0.44
CACNA1E-208ENST00000533229 COL1A1P02452 1464 aaPredicted RBP17.79■□□□□ 0.44
CACNA1E-208ENST00000533229 CMA1P23946 247 aa17.78■□□□□ 0.44
CACNA1E-208ENST00000533229 CMTR1Q8N1G2 835 aaKnown RBP17.78■□□□□ 0.44
CACNA1E-208ENST00000533229 BCL2L12Q9HB09 334 aa17.78■□□□□ 0.44
CACNA1E-208ENST00000533229 BSDC1Q9NW68 430 aaPredicted RBP17.78■□□□□ 0.44
CACNA1E-208ENST00000533229 MINPP1Q9UNW1 487 aa17.78■□□□□ 0.44
CACNA1E-208ENST00000533229 BECN2A8MW95 431 aa17.78■□□□□ 0.44
CACNA1E-208ENST00000533229 FMNL1O95466 1100 aaPredicted RBP17.78■□□□□ 0.44
CACNA1E-208ENST00000533229 IFNAR1P17181 557 aa17.78■□□□□ 0.44
CACNA1E-208ENST00000533229 PPARAQ07869 468 aa17.78■□□□□ 0.44
CACNA1E-208ENST00000533229 DPCR1Q3MIW9 517 aa17.78■□□□□ 0.44
CACNA1E-208ENST00000533229 TBC1D9BQ66K14 1250 aa17.78■□□□□ 0.44
CACNA1E-208ENST00000533229 ZNF384Q8TF68 577 aa17.78■□□□□ 0.44
CACNA1E-208ENST00000533229 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.78■□□□□ 0.44
CACNA1E-208ENST00000533229 PIP4K2BP78356 416 aa17.77■□□□□ 0.44
CACNA1E-208ENST00000533229 SSRP1Q08945 709 aaKnown RBP17.77■□□□□ 0.44
CACNA1E-208ENST00000533229 CCDC82Q8N4S0 544 aa17.77■□□□□ 0.44
CACNA1E-208ENST00000533229 AOPEPQ8N6M6 819 aa17.77■□□□□ 0.44
CACNA1E-208ENST00000533229 FAM84BQ96KN1 310 aaPredicted RBP17.77■□□□□ 0.44
CACNA1E-208ENST00000533229 RIOK1Q9BRS2 568 aaKnown RBP17.77■□□□□ 0.44
CACNA1E-208ENST00000533229 RAI14Q9P0K7 980 aa17.77■□□□□ 0.44
CACNA1E-208ENST00000533229 LTBP4Q8N2S1 1624 aa17.77■□□□□ 0.44
CACNA1E-208ENST00000533229 RBM10P98175 930 aaKnown RBP17.77■□□□□ 0.43
CACNA1E-208ENST00000533229 GNL2Q13823 731 aaKnown RBP17.77■□□□□ 0.43
CACNA1E-208ENST00000533229 UBE4AQ14139 1066 aa17.77■□□□□ 0.43
CACNA1E-208ENST00000533229 WTAPQ15007 396 aa17.77■□□□□ 0.43
CACNA1E-208ENST00000533229 SHC4Q6S5L8 630 aa17.77■□□□□ 0.43
CACNA1E-208ENST00000533229 CEP57L1Q8IYX8 460 aa17.77■□□□□ 0.43
CACNA1E-208ENST00000533229 CACTINQ8WUQ7 758 aaKnown RBP17.77■□□□□ 0.43
CACNA1E-208ENST00000533229 CICQ96RK0 1608 aaPredicted RBP17.76■□□□□ 0.43
CACNA1E-208ENST00000533229 MINDY4BA8MYZ0 360 aa17.76■□□□□ 0.43
CACNA1E-208ENST00000533229 KLRK1P26718 216 aa17.76■□□□□ 0.43
CACNA1E-208ENST00000533229 CDC25BP30305 580 aa17.76■□□□□ 0.43
CACNA1E-208ENST00000533229 NBPF11Q86T75 865 aa17.76■□□□□ 0.43
CACNA1E-208ENST00000533229 CLIC6Q96NY7 704 aa17.76■□□□□ 0.43
CACNA1E-208ENST00000533229 STK36Q9NRP7 1315 aa17.76■□□□□ 0.43
CACNA1E-208ENST00000533229 TIAM2Q8IVF5 1701 aa17.76■□□□□ 0.43
CACNA1E-208ENST00000533229 MAGEB6P1A0A0J9YX57 407 aa17.75■□□□□ 0.43
CACNA1E-208ENST00000533229 BTBD18B2RXH4 712 aa17.75■□□□□ 0.43
CACNA1E-208ENST00000533229 BIN1O00499 593 aa17.75■□□□□ 0.43
CACNA1E-208ENST00000533229 PPP6R2O75170 966 aa17.75■□□□□ 0.43
CACNA1E-208ENST00000533229 DYNLL1P63167 89 aaKnown RBP17.75■□□□□ 0.43
CACNA1E-208ENST00000533229 ARID5BQ14865 1188 aa17.75■□□□□ 0.43
CACNA1E-208ENST00000533229 MRFAP1L1Q96HT8 127 aa17.75■□□□□ 0.43
CACNA1E-208ENST00000533229 KCNJ14Q9UNX9 436 aa17.75■□□□□ 0.43
CACNA1E-208ENST00000533229 NID2Q14112 1375 aa17.75■□□□□ 0.43
CACNA1E-208ENST00000533229 SLC3A2P08195 630 aaKnown RBP17.75■□□□□ 0.43
CACNA1E-208ENST00000533229 TRIM29Q14134 588 aa17.75■□□□□ 0.43
CACNA1E-208ENST00000533229 HPSEQ9Y251 543 aa17.75■□□□□ 0.43
CACNA1E-208ENST00000533229 CYP2D7A0A087X1C5 515 aa17.74■□□□□ 0.43
CACNA1E-208ENST00000533229 SART3Q15020 963 aaKnown RBP17.74■□□□□ 0.43
CACNA1E-208ENST00000533229 RTN1Q16799 776 aa17.74■□□□□ 0.43
CACNA1E-208ENST00000533229 CCDC24Q8N4L8 307 aa17.74■□□□□ 0.43
CACNA1E-208ENST00000533229 SRP68Q9UHB9 627 aaKnown RBP17.74■□□□□ 0.43
CACNA1E-208ENST00000533229 GTF2E1P29083 439 aaPredicted RBP17.74■□□□□ 0.43
CACNA1E-208ENST00000533229 CAVIN4Q5BKX8 364 aa17.74■□□□□ 0.43
CACNA1E-208ENST00000533229 SLC10A5Q5PT55 438 aa17.74■□□□□ 0.43
CACNA1E-208ENST00000533229 CRACR2BQ8N4Y2 399 aaPredicted RBP17.74■□□□□ 0.43
CACNA1E-208ENST00000533229 MYRIPQ8NFW9 859 aa17.74■□□□□ 0.43
CACNA1E-208ENST00000533229 RNF41Q9H4P4 317 aaPredicted RBP17.74■□□□□ 0.43
CACNA1E-208ENST00000533229 GNL3LQ9NVN8 582 aaKnown RBP17.74■□□□□ 0.43
CACNA1E-208ENST00000533229 LAMB2P55268 1798 aa17.73■□□□□ 0.43
CACNA1E-208ENST00000533229 ERICH2A1L162 156 aa17.73■□□□□ 0.43
CACNA1E-208ENST00000533229 MMP1P03956 469 aa17.73■□□□□ 0.43
CACNA1E-208ENST00000533229 SYKP43405 635 aa17.73■□□□□ 0.43
CACNA1E-208ENST00000533229 TOB1P50616 345 aaPredicted RBP17.73■□□□□ 0.43
CACNA1E-208ENST00000533229 SEC23AQ15436 765 aa17.73■□□□□ 0.43
CACNA1E-208ENST00000533229 NOSTRINQ8IVI9 506 aa17.73■□□□□ 0.43
CACNA1E-208ENST00000533229 ZNF654Q8IZM8 581 aa17.73■□□□□ 0.43
CACNA1E-208ENST00000533229 FANCBQ8NB91 859 aa17.73■□□□□ 0.43
CACNA1E-208ENST00000533229 NUP133Q8WUM0 1156 aa17.73■□□□□ 0.43
CACNA1E-208ENST00000533229 NAT10Q9H0A0 1025 aaKnown RBP17.73■□□□□ 0.43
CACNA1E-208ENST00000533229 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.73■□□□□ 0.43
CACNA1E-208ENST00000533229 ANAPC4Q9UJX5 808 aa17.73■□□□□ 0.43
CACNA1E-208ENST00000533229 BCORQ6W2J9 1755 aa17.73■□□□□ 0.43
CACNA1E-208ENST00000533229 EVX2Q03828 476 aa17.72■□□□□ 0.43
CACNA1E-208ENST00000533229 ISM2Q6H9L7 571 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms