RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 NAA16Q6N069 864 aaPredicted RBP37.03■■■■□ 3.52
SSSCA1-207ENST00000533115 CLASRPQ8N2M8 674 aaKnown RBP37.03■■■■□ 3.52
SSSCA1-207ENST00000533115 OTUD5Q96G74 571 aa37.03■■■■□ 3.52
SSSCA1-207ENST00000533115 YTHDC1Q96MU7 727 aaKnown RBP37.03■■■■□ 3.52
SSSCA1-207ENST00000533115 MAST2Q6P0Q8 1798 aa37.02■■■■□ 3.52
SSSCA1-207ENST00000533115 SH3BP5LQ7L8J4 393 aa37.02■■■■□ 3.52
SSSCA1-207ENST00000533115 ERO1BQ86YB8 467 aa37.02■■■■□ 3.52
SSSCA1-207ENST00000533115 ZSCAN29Q8IWY8 852 aaPredicted RBP37.02■■■■□ 3.52
SSSCA1-207ENST00000533115 ABHD8Q96I13 439 aa37.02■■■■□ 3.52
SSSCA1-207ENST00000533115 MS4A4AQ96JQ5 239 aa37.02■■■■□ 3.52
SSSCA1-207ENST00000533115 PIH1D3Q9NQM4 214 aaKnown RBP37.02■■■■□ 3.52
SSSCA1-207ENST00000533115 NPM3O75607 178 aaKnown RBP37.01■■■■□ 3.52
SSSCA1-207ENST00000533115 INPP5BP32019 993 aa37.01■■■■□ 3.52
SSSCA1-207ENST00000533115 DGKZQ13574 1117 aa37.01■■■■□ 3.52
SSSCA1-207ENST00000533115 NOM1Q5C9Z4 860 aaKnown RBP37.01■■■■□ 3.52
SSSCA1-207ENST00000533115 OTUD7BQ6GQQ9 843 aa37.01■■■■□ 3.52
SSSCA1-207ENST00000533115 MCOLN1Q9GZU1 580 aa37.01■■■■□ 3.52
SSSCA1-207ENST00000533115 ATRNL1Q5VV63 1379 aa37.01■■■■□ 3.51
SSSCA1-207ENST00000533115 GTF2A2P52657 109 aa37■■■■□ 3.51
SSSCA1-207ENST00000533115 PTPN18Q99952 460 aa37■■■■□ 3.51
SSSCA1-207ENST00000533115 NOL10Q9BSC4 688 aaKnown RBP37■■■■□ 3.51
SSSCA1-207ENST00000533115 DOCK2Q92608 1830 aa37■■■■□ 3.51
SSSCA1-207ENST00000533115 DDTLA6NHG4 134 aaPredicted RBP36.99■■■■□ 3.51
SSSCA1-207ENST00000533115 GPR25O00155 361 aa36.99■■■■□ 3.51
SSSCA1-207ENST00000533115 ZNF296Q8WUU4 475 aaPredicted RBP36.99■■■■□ 3.51
SSSCA1-207ENST00000533115 R3HDMLQ9H3Y0 253 aa36.99■■■■□ 3.51
SSSCA1-207ENST00000533115 MYO5AQ9Y4I1 1855 aaKnown RBP36.99■■■■□ 3.51
SSSCA1-207ENST00000533115 BAG3O95817 575 aa36.98■■■■□ 3.51
SSSCA1-207ENST00000533115 TEX11Q8IYF3 940 aa36.97■■■■□ 3.51
SSSCA1-207ENST00000533115 NDUFB9Q9Y6M9 179 aa36.97■■■■□ 3.51
SSSCA1-207ENST00000533115 IFIT2P09913 472 aaKnown RBP36.96■■■■□ 3.51
SSSCA1-207ENST00000533115 PPIL2Q13356 520 aa36.96■■■■□ 3.51
SSSCA1-207ENST00000533115 SH3RF3Q8TEJ3 882 aaPredicted RBP36.96■■■■□ 3.51
SSSCA1-207ENST00000533115 BRI3BPQ8WY22 251 aa36.96■■■■□ 3.51
SSSCA1-207ENST00000533115 AATFQ9NY61 560 aaKnown RBP eCLIP36.96■■■■□ 3.51
SSSCA1-207ENST00000533115 CCL15-CCL14A0A0B4J2E2 113 aa36.95■■■■□ 3.51
SSSCA1-207ENST00000533115 PPP4CP60510 307 aa36.95■■■■□ 3.51
SSSCA1-207ENST00000533115 MAP3K10Q02779 954 aa36.95■■■■□ 3.51
SSSCA1-207ENST00000533115 PPATQ06203 517 aa36.95■■■■□ 3.51
SSSCA1-207ENST00000533115 CCL15Q16663 113 aa36.95■■■■□ 3.51
SSSCA1-207ENST00000533115 NOL9Q5SY16 702 aaKnown RBP36.95■■■■□ 3.51
SSSCA1-207ENST00000533115 ADGRA1Q86SQ6 560 aa36.95■■■■□ 3.51
SSSCA1-207ENST00000533115 IRF6O14896 467 aa36.94■■■■□ 3.5
SSSCA1-207ENST00000533115 IDH1O75874 414 aaKnown RBP36.94■■■■□ 3.5
SSSCA1-207ENST00000533115 PHF20L1A8MW92 1017 aa36.93■■■■□ 3.5
SSSCA1-207ENST00000533115 PLCG2P16885 1265 aa36.93■■■■□ 3.5
SSSCA1-207ENST00000533115 RRP1P56182 461 aaKnown RBP36.93■■■■□ 3.5
SSSCA1-207ENST00000533115 CTU1Q7Z7A3 348 aaKnown RBP36.93■■■■□ 3.5
SSSCA1-207ENST00000533115 OSBPL5Q9H0X9 879 aaPredicted RBP36.93■■■■□ 3.5
SSSCA1-207ENST00000533115 BCL11AQ9H165 835 aa36.93■■■■□ 3.5
SSSCA1-207ENST00000533115 ANTXR1Q9H6X2 564 aa36.93■■■■□ 3.5
SSSCA1-207ENST00000533115 COL2A1P02458 1487 aaPredicted RBP36.92■■■■□ 3.5
SSSCA1-207ENST00000533115 FKTNO75072 461 aa36.91■■■■□ 3.5
SSSCA1-207ENST00000533115 CETPP11597 493 aa36.91■■■■□ 3.5
SSSCA1-207ENST00000533115 CYP7A1P22680 504 aa36.91■■■■□ 3.5
SSSCA1-207ENST00000533115 SNAPC2Q13487 334 aa36.91■■■■□ 3.5
SSSCA1-207ENST00000533115 PPIL4Q8WUA2 492 aaKnown RBP eCLIP36.91■■■■□ 3.5
SSSCA1-207ENST00000533115 CRHR2Q13324 411 aa36.9■■■■□ 3.5
SSSCA1-207ENST00000533115 SLURP2P0DP57 97 aa36.89■■■■□ 3.5
SSSCA1-207ENST00000533115 MAP3K12Q12852 859 aa36.89■■■■□ 3.5
SSSCA1-207ENST00000533115 LRRCC1Q9C099 1032 aa36.89■■■■□ 3.5
SSSCA1-207ENST00000533115 TBC1D12O60347 775 aa36.88■■■■□ 3.49
SSSCA1-207ENST00000533115 MAGEB6Q8N7X4 407 aa36.88■■■■□ 3.49
SSSCA1-207ENST00000533115 TTF1Q15361 905 aaPredicted RBP36.87■■■■□ 3.49
SSSCA1-207ENST00000533115 TMED8Q6PL24 325 aaPredicted RBP36.87■■■■□ 3.49
SSSCA1-207ENST00000533115 SCYL3Q8IZE3 742 aa36.87■■■■□ 3.49
SSSCA1-207ENST00000533115 FAM43AQ8N2R8 423 aa36.87■■■■□ 3.49
SSSCA1-207ENST00000533115 TGFBRAP1Q8WUH2 860 aa36.86■■■■□ 3.49
SSSCA1-207ENST00000533115 KCNH4Q9UQ05 1017 aa36.86■■■■□ 3.49
SSSCA1-207ENST00000533115 DYNLL1P63167 89 aaKnown RBP36.85■■■■□ 3.49
SSSCA1-207ENST00000533115 XPO5Q9HAV4 1204 aaKnown RBP eCLIP36.85■■■■□ 3.49
SSSCA1-207ENST00000533115 PICK1Q9NRD5 415 aa36.85■■■■□ 3.49
SSSCA1-207ENST00000533115 CTNND1O60716 968 aaKnown RBP36.84■■■■□ 3.49
SSSCA1-207ENST00000533115 TAF1CQ15572 869 aaPredicted RBP36.84■■■■□ 3.49
SSSCA1-207ENST00000533115 MAPKAPK5Q8IW41 473 aa36.84■■■■□ 3.49
SSSCA1-207ENST00000533115 DNAJC2Q99543 621 aaKnown RBP36.84■■■■□ 3.49
SSSCA1-207ENST00000533115 DHX36Q9H2U1 1008 aaKnown RBP36.84■■■■□ 3.49
SSSCA1-207ENST00000533115 CERS3Q8IU89 383 aa36.83■■■■□ 3.49
SSSCA1-207ENST00000533115 MIGA1Q8NAN2 632 aa36.83■■■■□ 3.49
SSSCA1-207ENST00000533115 DCTPP1Q9H773 170 aa36.83■■■■□ 3.49
SSSCA1-207ENST00000533115 FLT1P17948 1338 aa36.83■■■■□ 3.49
SSSCA1-207ENST00000533115 CDK5RAP2Q96SN8 1893 aa36.82■■■■□ 3.49
SSSCA1-207ENST00000533115 CCDC85CA6NKD9 419 aa36.82■■■■□ 3.48
SSSCA1-207ENST00000533115 BTBD19C9JJ37 291 aa36.82■■■■□ 3.48
SSSCA1-207ENST00000533115 SMARCA5O60264 1052 aaPredicted RBP36.82■■■■□ 3.48
SSSCA1-207ENST00000533115 PTPRAP18433 802 aa36.82■■■■□ 3.48
SSSCA1-207ENST00000533115 ZFYVE28Q9HCC9 887 aa36.82■■■■□ 3.48
SSSCA1-207ENST00000533115 ZCCHC17Q9NP64 241 aaKnown RBP36.82■■■■□ 3.48
SSSCA1-207ENST00000533115 FOCADQ5VW36 1801 aa36.82■■■■□ 3.48
SSSCA1-207ENST00000533115 FAM196BA6NMK8 535 aa36.81■■■■□ 3.48
SSSCA1-207ENST00000533115 GOLIM4O00461 696 aa36.81■■■■□ 3.48
SSSCA1-207ENST00000533115 ATP5JP18859 108 aa36.81■■■■□ 3.48
SSSCA1-207ENST00000533115 PKN2Q16513 984 aaKnown RBP36.81■■■■□ 3.48
SSSCA1-207ENST00000533115 PI4KBQ9UBF8 816 aa36.81■■■■□ 3.48
SSSCA1-207ENST00000533115 HERC5Q9UII4 1024 aaKnown RBP36.8■■■■□ 3.48
SSSCA1-207ENST00000533115 ZHX2Q9Y6X8 837 aa36.8■■■■□ 3.48
SSSCA1-207ENST00000533115 CXCL11O14625 94 aa36.79■■■■□ 3.48
SSSCA1-207ENST00000533115 BOLA2Q9H3K6 86 aa36.79■■■■□ 3.48
SSSCA1-207ENST00000533115 PCDHB15Q9Y5E8 787 aa36.79■■■■□ 3.48
SSSCA1-207ENST00000533115 DOCK1Q14185 1865 aa36.79■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms