RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 COA7Q96BR5 231 aa14.37□□□□□ -0.11
CMTM1-216ENST00000533078 USP44Q9H0E7 712 aa14.37□□□□□ -0.11
CMTM1-216ENST00000533078 SIL1Q9H173 461 aa14.37□□□□□ -0.11
CMTM1-216ENST00000533078 FAM198AQ9UFP1 575 aa14.37□□□□□ -0.11
CMTM1-216ENST00000533078 PNMA3Q9UL41 463 aa14.37□□□□□ -0.11
CMTM1-216ENST00000533078 TAOK2Q9UL54 1235 aa14.37□□□□□ -0.11
CMTM1-216ENST00000533078 MGAMO43451 1857 aa14.37□□□□□ -0.11
CMTM1-216ENST00000533078 SALL1Q9NSC2 1324 aa14.37□□□□□ -0.11
CMTM1-216ENST00000533078 DOCK2Q92608 1830 aa14.36□□□□□ -0.11
CMTM1-216ENST00000533078 A0A1W2PPC1 479 aa14.36□□□□□ -0.11
CMTM1-216ENST00000533078 CIAO1O76071 339 aa14.36□□□□□ -0.11
CMTM1-216ENST00000533078 SGPL1O95470 568 aa14.36□□□□□ -0.11
CMTM1-216ENST00000533078 UBTFL1P0CB47 393 aaPredicted RBP14.36□□□□□ -0.11
CMTM1-216ENST00000533078 FLT3LGP49771 235 aa14.36□□□□□ -0.11
CMTM1-216ENST00000533078 RGS3P49796 1198 aa14.36□□□□□ -0.11
CMTM1-216ENST00000533078 MOGSQ13724 837 aa14.36□□□□□ -0.11
CMTM1-216ENST00000533078 SPTY2D1Q68D10 685 aaPredicted RBP14.36□□□□□ -0.11
CMTM1-216ENST00000533078 GPAT2Q6NUI2 795 aa14.36□□□□□ -0.11
CMTM1-216ENST00000533078 PXYLP1Q8TE99 480 aa14.36□□□□□ -0.11
CMTM1-216ENST00000533078 UNC93B1Q9H1C4 597 aa14.36□□□□□ -0.11
CMTM1-216ENST00000533078 LAMA3Q16787 3333 aa14.35□□□□□ -0.11
CMTM1-216ENST00000533078 E9PSI1 815 aa14.35□□□□□ -0.11
CMTM1-216ENST00000533078 CTNND1O60716 968 aaKnown RBP14.35□□□□□ -0.11
CMTM1-216ENST00000533078 INHAP05111 366 aa14.35□□□□□ -0.11
CMTM1-216ENST00000533078 PTPRAP18433 802 aa14.35□□□□□ -0.11
CMTM1-216ENST00000533078 IL15P40933 162 aaPredicted RBP14.35□□□□□ -0.11
CMTM1-216ENST00000533078 IRF5Q13568 498 aa14.35□□□□□ -0.11
CMTM1-216ENST00000533078 UBE2Q1Q7Z7E8 422 aa14.35□□□□□ -0.11
CMTM1-216ENST00000533078 IDI2Q9BXS1 227 aa14.35□□□□□ -0.11
CMTM1-216ENST00000533078 ABCF2Q9UG63 623 aa14.35□□□□□ -0.11
CMTM1-216ENST00000533078 TRIM75PA6NK02 468 aa14.34□□□□□ -0.11
CMTM1-216ENST00000533078 ZBTB7BO15156 539 aaPredicted RBP14.34□□□□□ -0.11
CMTM1-216ENST00000533078 RFX5P48382 616 aaPredicted RBP14.34□□□□□ -0.11
CMTM1-216ENST00000533078 PABPC4Q13310 644 aaKnown RBP eCLIP14.34□□□□□ -0.11
CMTM1-216ENST00000533078 SSH1Q8WYL5 1049 aa14.34□□□□□ -0.11
CMTM1-216ENST00000533078 GABRQQ9UN88 632 aa14.34□□□□□ -0.11
CMTM1-216ENST00000533078 AFG3L2Q9Y4W6 797 aa14.34□□□□□ -0.11
CMTM1-216ENST00000533078 MYH2Q9UKX2 1941 aa14.34□□□□□ -0.11
CMTM1-216ENST00000533078 A0A0C4DFX4 3053 aa14.33□□□□□ -0.11
CMTM1-216ENST00000533078 COL6A3P12111 3177 aa14.33□□□□□ -0.12
CMTM1-216ENST00000533078 PHF20L1A8MW92 1017 aa14.33□□□□□ -0.12
CMTM1-216ENST00000533078 ELNP15502 786 aa14.33□□□□□ -0.12
CMTM1-216ENST00000533078 PICALMQ13492 652 aa14.33□□□□□ -0.12
CMTM1-216ENST00000533078 ALDH1L2Q3SY69 923 aa14.33□□□□□ -0.12
CMTM1-216ENST00000533078 ATG9AQ7Z3C6 839 aa14.33□□□□□ -0.12
CMTM1-216ENST00000533078 DEFB118Q96PH6 123 aa14.33□□□□□ -0.12
CMTM1-216ENST00000533078 SMC4Q9NTJ3 1288 aa14.33□□□□□ -0.12
CMTM1-216ENST00000533078 AGTPBP1Q9UPW5 1226 aa14.33□□□□□ -0.12
CMTM1-216ENST00000533078 PHKA1P46020 1223 aa14.32□□□□□ -0.12
CMTM1-216ENST00000533078 NECAB2Q7Z6G3 386 aa14.32□□□□□ -0.12
CMTM1-216ENST00000533078 ZFPM1Q8IX07 1006 aa14.32□□□□□ -0.12
CMTM1-216ENST00000533078 SLC17A8Q8NDX2 589 aa14.32□□□□□ -0.12
CMTM1-216ENST00000533078 TBC1D2Q9BYX2 928 aa14.32□□□□□ -0.12
CMTM1-216ENST00000533078 GAKO14976 1311 aa14.32□□□□□ -0.12
CMTM1-216ENST00000533078 ATRNL1Q5VV63 1379 aa14.32□□□□□ -0.12
CMTM1-216ENST00000533078 DOCK1Q14185 1865 aa14.31□□□□□ -0.12
CMTM1-216ENST00000533078 BTDP43251 543 aa14.31□□□□□ -0.12
CMTM1-216ENST00000533078 GCLCP48506 637 aaPredicted RBP14.31□□□□□ -0.12
CMTM1-216ENST00000533078 GSTO1P78417 241 aa14.31□□□□□ -0.12
CMTM1-216ENST00000533078 FAM110CQ1W6H9 321 aa14.31□□□□□ -0.12
CMTM1-216ENST00000533078 CCDC102BQ68D86 513 aa14.31□□□□□ -0.12
CMTM1-216ENST00000533078 ERICH6Q7L0X2 663 aa14.31□□□□□ -0.12
CMTM1-216ENST00000533078 ANKRD13CQ8N6S4 541 aa14.31□□□□□ -0.12
CMTM1-216ENST00000533078 PROCA1Q8NCQ7 364 aaPredicted RBP14.31□□□□□ -0.12
CMTM1-216ENST00000533078 AKAP2Q9Y2D5 859 aa14.31□□□□□ -0.12
CMTM1-216ENST00000533078 PDS5AQ29RF7 1337 aaKnown RBP14.31□□□□□ -0.12
CMTM1-216ENST00000533078 ZBTB22O15209 634 aa14.3□□□□□ -0.12
CMTM1-216ENST00000533078 MAP4K4O95819 1239 aaPredicted RBP14.3□□□□□ -0.12
CMTM1-216ENST00000533078 LDHCP07864 332 aa14.3□□□□□ -0.12
CMTM1-216ENST00000533078 MVPQ14764 893 aaKnown RBP14.3□□□□□ -0.12
CMTM1-216ENST00000533078 ANKLE1Q8NAG6 615 aa14.3□□□□□ -0.12
CMTM1-216ENST00000533078 FAM163AQ96GL9 167 aaPredicted RBP14.3□□□□□ -0.12
CMTM1-216ENST00000533078 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.3□□□□□ -0.12
CMTM1-216ENST00000533078 PAK6Q9NQU5 681 aaPredicted RBP14.3□□□□□ -0.12
CMTM1-216ENST00000533078 MROH7-TTC4A0A0A0MT08 1334 aa14.3□□□□□ -0.12
CMTM1-216ENST00000533078 PTPRFP10586 1907 aa14.29□□□□□ -0.12
CMTM1-216ENST00000533078 DDTLA6NHG4 134 aaPredicted RBP14.29□□□□□ -0.12
CMTM1-216ENST00000533078 TBC1D12O60347 775 aa14.29□□□□□ -0.12
CMTM1-216ENST00000533078 HMGCRP04035 888 aa14.29□□□□□ -0.12
CMTM1-216ENST00000533078 MAP3K10Q02779 954 aa14.29□□□□□ -0.12
CMTM1-216ENST00000533078 RASGRF1Q13972 1273 aa14.29□□□□□ -0.12
CMTM1-216ENST00000533078 GORABQ5T7V8 394 aa14.29□□□□□ -0.12
CMTM1-216ENST00000533078 PAWRQ96IZ0 340 aaKnown RBP14.29□□□□□ -0.12
CMTM1-216ENST00000533078 NOL10Q9BSC4 688 aaKnown RBP14.29□□□□□ -0.12
CMTM1-216ENST00000533078 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.29□□□□□ -0.12
CMTM1-216ENST00000533078 OSBPL5Q9H0X9 879 aaPredicted RBP14.29□□□□□ -0.12
CMTM1-216ENST00000533078 PRO3102Q9H379 93 aa14.29□□□□□ -0.12
CMTM1-216ENST00000533078 AS3MTQ9HBK9 375 aa14.29□□□□□ -0.12
CMTM1-216ENST00000533078 ZNF521Q96K83 1311 aa14.29□□□□□ -0.12
CMTM1-216ENST00000533078 ADORA1P30542 326 aa14.28□□□□□ -0.12
CMTM1-216ENST00000533078 RFX7Q2KHR2 1363 aa14.28□□□□□ -0.12
CMTM1-216ENST00000533078 SH3BP5LQ7L8J4 393 aa14.28□□□□□ -0.12
CMTM1-216ENST00000533078 ZNF280CQ8ND82 737 aa14.28□□□□□ -0.12
CMTM1-216ENST00000533078 API5Q9BZZ5 524 aaKnown RBP14.28□□□□□ -0.12
CMTM1-216ENST00000533078 HMX1Q9NP08 348 aaPredicted RBP14.28□□□□□ -0.12
CMTM1-216ENST00000533078 COPRSQ9NQ92 184 aa14.28□□□□□ -0.12
CMTM1-216ENST00000533078 NPM3O75607 178 aaKnown RBP14.27□□□□□ -0.13
CMTM1-216ENST00000533078 SPP2Q13103 211 aa14.27□□□□□ -0.13
CMTM1-216ENST00000533078 TREML2Q5T2D2 321 aa14.27□□□□□ -0.13
CMTM1-216ENST00000533078 CCAR1Q8IX12 1150 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms