RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 LZTFL1Q9NQ48 299 aa10.7□□□□□ -0.7
BDNF-216ENST00000532997 RMND1Q9NWS8 449 aa10.7□□□□□ -0.7
BDNF-216ENST00000532997 DEXIO95424 95 aa10.7□□□□□ -0.7
BDNF-216ENST00000532997 GNAT2P19087 354 aa10.7□□□□□ -0.7
BDNF-216ENST00000532997 CKAP4Q07065 602 aaKnown RBP10.7□□□□□ -0.7
BDNF-216ENST00000532997 KIAA1328Q86T90 577 aa10.7□□□□□ -0.7
BDNF-216ENST00000532997 DIS3L2Q8IYB7 885 aaKnown RBP10.7□□□□□ -0.7
BDNF-216ENST00000532997 B4E1Z4 1266 aa10.7□□□□□ -0.7
BDNF-216ENST00000532997 POLR2DO15514 142 aaKnown RBP10.7□□□□□ -0.7
BDNF-216ENST00000532997 ATP1A3P13637 1013 aa10.7□□□□□ -0.7
BDNF-216ENST00000532997 NOSTRINQ8IVI9 506 aa10.7□□□□□ -0.7
BDNF-216ENST00000532997 ENOX1Q8TC92 643 aaKnown RBP10.7□□□□□ -0.7
BDNF-216ENST00000532997 OSBP2Q969R2 916 aa10.7□□□□□ -0.7
BDNF-216ENST00000532997 RASSF4Q9H2L5 321 aa10.7□□□□□ -0.7
BDNF-216ENST00000532997 ABCC12Q96J65 1359 aa10.7□□□□□ -0.7
BDNF-216ENST00000532997 PIK3C2AO00443 1686 aa10.69□□□□□ -0.7
BDNF-216ENST00000532997 TADA3O75528 432 aa10.69□□□□□ -0.7
BDNF-216ENST00000532997 CAPN2P17655 700 aa10.69□□□□□ -0.7
BDNF-216ENST00000532997 ERCC5P28715 1186 aaPredicted RBP10.69□□□□□ -0.7
BDNF-216ENST00000532997 ZAP70P43403 619 aa10.69□□□□□ -0.7
BDNF-216ENST00000532997 CTR9Q6PD62 1173 aa10.69□□□□□ -0.7
BDNF-216ENST00000532997 TMTC1Q8IUR5 882 aa10.69□□□□□ -0.7
BDNF-216ENST00000532997 STK11IPQ8N1F8 1099 aa10.69□□□□□ -0.7
BDNF-216ENST00000532997 ERBB3P21860 1342 aa10.69□□□□□ -0.7
BDNF-216ENST00000532997 LRRC24Q50LG9 513 aa10.69□□□□□ -0.7
BDNF-216ENST00000532997 RESP18Q5W5W9 173 aa10.69□□□□□ -0.7
BDNF-216ENST00000532997 NAPGQ99747 312 aaPredicted RBP10.69□□□□□ -0.7
BDNF-216ENST00000532997 GNL3LQ9NVN8 582 aaKnown RBP10.69□□□□□ -0.7
BDNF-216ENST00000532997 TUBE1Q9UJT0 475 aa10.69□□□□□ -0.7
BDNF-216ENST00000532997 RTL9Q8NET4 1388 aa10.69□□□□□ -0.7
BDNF-216ENST00000532997 RXRAP19793 462 aa10.69□□□□□ -0.7
BDNF-216ENST00000532997 PDIA6Q15084 440 aa10.69□□□□□ -0.7
BDNF-216ENST00000532997 ZSCAN26Q16670 478 aa10.69□□□□□ -0.7
BDNF-216ENST00000532997 MB21D2Q8IYB1 491 aaPredicted RBP10.69□□□□□ -0.7
BDNF-216ENST00000532997 FBXL16Q8N461 479 aa10.69□□□□□ -0.7
BDNF-216ENST00000532997 PHKBQ93100 1093 aa10.69□□□□□ -0.7
BDNF-216ENST00000532997 DHX58Q96C10 678 aa10.69□□□□□ -0.7
BDNF-216ENST00000532997 VPS18Q9P253 973 aa10.69□□□□□ -0.7
BDNF-216ENST00000532997 PUF60Q9UHX1 559 aaKnown RBP10.69□□□□□ -0.7
BDNF-216ENST00000532997 SYNRGQ9UMZ2 1314 aa10.69□□□□□ -0.7
BDNF-216ENST00000532997 N4BP2Q86UW6 1770 aaPredicted RBP10.68□□□□□ -0.7
BDNF-216ENST00000532997 WDHD1O75717 1129 aaPredicted RBP10.68□□□□□ -0.7
BDNF-216ENST00000532997 PLCD1P51178 756 aa10.68□□□□□ -0.7
BDNF-216ENST00000532997 PPP2R5BQ15173 497 aa10.68□□□□□ -0.7
BDNF-216ENST00000532997 AXDND1Q5T1B0 1012 aaPredicted RBP10.68□□□□□ -0.7
BDNF-216ENST00000532997 SRGAP1Q7Z6B7 1085 aa10.68□□□□□ -0.7
BDNF-216ENST00000532997 CTCFLQ8NI51 663 aaPredicted RBP10.68□□□□□ -0.7
BDNF-216ENST00000532997 EXOC4Q96A65 974 aa10.68□□□□□ -0.7
BDNF-216ENST00000532997 COL15A1P39059 1388 aa10.68□□□□□ -0.7
BDNF-216ENST00000532997 CYP2C19P33261 490 aa10.68□□□□□ -0.7
BDNF-216ENST00000532997 AFMP43652 599 aa10.68□□□□□ -0.7
BDNF-216ENST00000532997 ADKP55263 362 aaKnown RBP10.68□□□□□ -0.7
BDNF-216ENST00000532997 APOA5Q6Q788 366 aa10.68□□□□□ -0.7
BDNF-216ENST00000532997 CATIPQ7Z7H3 387 aa10.68□□□□□ -0.7
BDNF-216ENST00000532997 NBPF11Q86T75 865 aa10.68□□□□□ -0.7
BDNF-216ENST00000532997 CCDC82Q8N4S0 544 aa10.68□□□□□ -0.7
BDNF-216ENST00000532997 ORAI2Q96SN7 254 aa10.68□□□□□ -0.7
BDNF-216ENST00000532997 PRDM11Q9NQV5 511 aa10.68□□□□□ -0.7
BDNF-216ENST00000532997 LRP2BPQ9P2M1 347 aa10.68□□□□□ -0.7
BDNF-216ENST00000532997 EIF5P55010 431 aaKnown RBP10.68□□□□□ -0.7
BDNF-216ENST00000532997 WHAMMP3Q1A5X7 153 aa10.68□□□□□ -0.7
BDNF-216ENST00000532997 IQCA1Q86XH1 822 aa10.68□□□□□ -0.7
BDNF-216ENST00000532997 GOLGA5Q8TBA6 731 aa10.68□□□□□ -0.7
BDNF-216ENST00000532997 ZCRB1Q8TBF4 217 aaKnown RBP10.68□□□□□ -0.7
BDNF-216ENST00000532997 TMOD3Q9NYL9 352 aa10.68□□□□□ -0.7
BDNF-216ENST00000532997 SERTAD1Q9UHV2 236 aa10.68□□□□□ -0.7
BDNF-216ENST00000532997 CDC23Q9UJX2 597 aa10.68□□□□□ -0.7
BDNF-216ENST00000532997 PCDH11XQ9BZA7 1347 aa10.67□□□□□ -0.7
BDNF-216ENST00000532997 PCDH11YQ9BZA8 1340 aa10.67□□□□□ -0.7
BDNF-216ENST00000532997 UBE3CQ15386 1083 aa10.67□□□□□ -0.7
BDNF-216ENST00000532997 CC2D1AQ6P1N0 951 aaPredicted RBP10.67□□□□□ -0.7
BDNF-216ENST00000532997 SMARCC1Q92922 1105 aaPredicted RBP10.67□□□□□ -0.7
BDNF-216ENST00000532997 PANX2Q96RD6 677 aa10.67□□□□□ -0.7
BDNF-216ENST00000532997 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.67□□□□□ -0.7
BDNF-216ENST00000532997 SALL1Q9NSC2 1324 aa10.67□□□□□ -0.7
BDNF-216ENST00000532997 SH2B2O14492 632 aaPredicted RBP10.67□□□□□ -0.7
BDNF-216ENST00000532997 FDPSP14324 419 aaKnown RBP10.67□□□□□ -0.7
BDNF-216ENST00000532997 ESR2Q92731 530 aa10.67□□□□□ -0.7
BDNF-216ENST00000532997 CLIC6Q96NY7 704 aa10.67□□□□□ -0.7
BDNF-216ENST00000532997 WWC3Q9ULE0 1092 aa10.67□□□□□ -0.7
BDNF-216ENST00000532997 KRT2P35908 639 aa10.67□□□□□ -0.7
BDNF-216ENST00000532997 LONRF2Q1L5Z9 754 aa10.67□□□□□ -0.7
BDNF-216ENST00000532997 SPATA1Q5VX52 437 aa10.67□□□□□ -0.7
BDNF-216ENST00000532997 RRAGBQ5VZM2 374 aa10.67□□□□□ -0.7
BDNF-216ENST00000532997 CYP26C1Q6V0L0 522 aa10.67□□□□□ -0.7
BDNF-216ENST00000532997 FERMT2Q96AC1 680 aa10.67□□□□□ -0.7
BDNF-216ENST00000532997 TUBGCP6Q96RT7 1819 aa10.67□□□□□ -0.7
BDNF-216ENST00000532997 STK36Q9NRP7 1315 aa10.67□□□□□ -0.7
BDNF-216ENST00000532997 SEC31AO94979 1220 aaKnown RBP10.66□□□□□ -0.7
BDNF-216ENST00000532997 AMOTL1Q8IY63 956 aa10.66□□□□□ -0.7
BDNF-216ENST00000532997 IQUBQ8NA54 791 aa10.66□□□□□ -0.7
BDNF-216ENST00000532997 NEK11Q8NG66 645 aa10.66□□□□□ -0.7
BDNF-216ENST00000532997 FOXP1Q9H334 677 aaPredicted RBP10.66□□□□□ -0.7
BDNF-216ENST00000532997 GPHNQ9NQX3 736 aaPredicted RBP10.66□□□□□ -0.7
BDNF-216ENST00000532997 MYO1AQ9UBC5 1043 aa10.66□□□□□ -0.7
BDNF-216ENST00000532997 TRMT112Q9UI30 125 aaKnown RBP10.66□□□□□ -0.7
BDNF-216ENST00000532997 MAN1B1Q9UKM7 699 aa10.66□□□□□ -0.7
BDNF-216ENST00000532997 CYLC1P35663 651 aaPredicted RBP10.66□□□□□ -0.7
BDNF-216ENST00000532997 USP8P40818 1118 aa10.66□□□□□ -0.7
BDNF-216ENST00000532997 KRT83P78385 493 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms