RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 BBOX1O75936 387 aa12.07□□□□□ -0.48
COLCA1-203ENST00000532918 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.07□□□□□ -0.48
COLCA1-203ENST00000532918 USP19O94966 1318 aa12.07□□□□□ -0.48
COLCA1-203ENST00000532918 SMC1AQ14683 1233 aaKnown RBP12.07□□□□□ -0.48
COLCA1-203ENST00000532918 CCDC93Q567U6 631 aa12.07□□□□□ -0.48
COLCA1-203ENST00000532918 DALRD3Q5D0E6 543 aaKnown RBP12.07□□□□□ -0.48
COLCA1-203ENST00000532918 MICALCLQ6ZW33 695 aa12.07□□□□□ -0.48
COLCA1-203ENST00000532918 SUCLG2Q96I99 432 aa12.07□□□□□ -0.48
COLCA1-203ENST00000532918 NR1I2O75469 434 aa12.07□□□□□ -0.48
COLCA1-203ENST00000532918 SPOUT1Q5T280 376 aaKnown RBP12.07□□□□□ -0.48
COLCA1-203ENST00000532918 GADL1Q6ZQY3 521 aa12.07□□□□□ -0.48
COLCA1-203ENST00000532918 TRERF1Q96PN7 1200 aa12.07□□□□□ -0.48
COLCA1-203ENST00000532918 SELENOOQ9BVL4 669 aa12.07□□□□□ -0.48
COLCA1-203ENST00000532918 CCDC169A6NNP5 214 aa12.07□□□□□ -0.48
COLCA1-203ENST00000532918 G2E3Q7L622 706 aa12.07□□□□□ -0.48
COLCA1-203ENST00000532918 KBTBD3Q8NAB2 608 aa12.07□□□□□ -0.48
COLCA1-203ENST00000532918 ZKSCAN3Q9BRR0 538 aa12.07□□□□□ -0.48
COLCA1-203ENST00000532918 B4E1Z4 1266 aa12.06□□□□□ -0.48
COLCA1-203ENST00000532918 SERPINB2P05120 415 aa12.06□□□□□ -0.48
COLCA1-203ENST00000532918 OSBPP22059 807 aa12.06□□□□□ -0.48
COLCA1-203ENST00000532918 MAP2K1Q02750 393 aaPredicted RBP12.06□□□□□ -0.48
COLCA1-203ENST00000532918 TRPC3Q13507 836 aa12.06□□□□□ -0.48
COLCA1-203ENST00000532918 MCF2L2Q86YR7 1114 aa12.06□□□□□ -0.48
COLCA1-203ENST00000532918 TBC1D2Q9BYX2 928 aa12.06□□□□□ -0.48
COLCA1-203ENST00000532918 ZHX1Q9UKY1 873 aaPredicted RBP12.06□□□□□ -0.48
COLCA1-203ENST00000532918 FAM135BQ49AJ0 1406 aa12.06□□□□□ -0.48
COLCA1-203ENST00000532918 NEURL1BA8MQ27 555 aa12.06□□□□□ -0.48
COLCA1-203ENST00000532918 EPB41P11171 864 aaKnown RBP12.06□□□□□ -0.48
COLCA1-203ENST00000532918 UVSSAQ2YD98 709 aa12.06□□□□□ -0.48
COLCA1-203ENST00000532918 PAGR1Q9BTK6 254 aa12.06□□□□□ -0.48
COLCA1-203ENST00000532918 NBPF3Q9H094 633 aa12.06□□□□□ -0.48
COLCA1-203ENST00000532918 ZBTB40Q9NUA8 1239 aa12.06□□□□□ -0.48
COLCA1-203ENST00000532918 MARCKSP29966 332 aaPredicted RBP12.06□□□□□ -0.48
COLCA1-203ENST00000532918 BIRC3Q13489 604 aa12.06□□□□□ -0.48
COLCA1-203ENST00000532918 KIFAP3Q92845 792 aa12.06□□□□□ -0.48
COLCA1-203ENST00000532918 CEP63Q96MT8 703 aa12.06□□□□□ -0.48
COLCA1-203ENST00000532918 ANGEL1Q9UNK9 670 aaKnown RBP12.06□□□□□ -0.48
COLCA1-203ENST00000532918 SEMA3EO15041 775 aa12.06□□□□□ -0.48
COLCA1-203ENST00000532918 CHMLP26374 656 aa12.06□□□□□ -0.48
COLCA1-203ENST00000532918 NONOQ15233 471 aaKnown RBP eCLIP12.06□□□□□ -0.48
COLCA1-203ENST00000532918 ANKARQ7Z5J8 1434 aa12.06□□□□□ -0.48
COLCA1-203ENST00000532918 STX10O60499 249 aa12.06□□□□□ -0.48
COLCA1-203ENST00000532918 GIGYF1O75420 1035 aaPredicted RBP12.06□□□□□ -0.48
COLCA1-203ENST00000532918 RTKN2Q8IZC4 609 aa12.06□□□□□ -0.48
COLCA1-203ENST00000532918 NEK11Q8NG66 645 aa12.06□□□□□ -0.48
COLCA1-203ENST00000532918 RASAL2Q9UJF2 1139 aa12.06□□□□□ -0.48
COLCA1-203ENST00000532918 PCDHB15Q9Y5E8 787 aa12.06□□□□□ -0.48
COLCA1-203ENST00000532918 BLMP54132 1417 aaPredicted RBP12.05□□□□□ -0.48
COLCA1-203ENST00000532918 CHST3Q7LGC8 479 aa12.05□□□□□ -0.48
COLCA1-203ENST00000532918 TBC1D32Q96NH3 1257 aa12.05□□□□□ -0.48
COLCA1-203ENST00000532918 MRPL11Q9Y3B7 192 aaKnown RBP12.05□□□□□ -0.48
COLCA1-203ENST00000532918 CHMP2AO43633 222 aa12.05□□□□□ -0.48
COLCA1-203ENST00000532918 URI1O94763 535 aaPredicted RBP12.05□□□□□ -0.48
COLCA1-203ENST00000532918 OTUD6AQ7L8S5 288 aa12.05□□□□□ -0.48
COLCA1-203ENST00000532918 RGS22Q8NE09 1264 aa12.05□□□□□ -0.48
COLCA1-203ENST00000532918 NOX5Q96PH1 765 aa12.05□□□□□ -0.48
COLCA1-203ENST00000532918 ZNF335Q9H4Z2 1342 aaPredicted RBP12.05□□□□□ -0.48
COLCA1-203ENST00000532918 KDRP35968 1356 aa12.05□□□□□ -0.48
COLCA1-203ENST00000532918 ATP2A1O14983 1001 aa12.05□□□□□ -0.48
COLCA1-203ENST00000532918 ARHGEF25Q86VW2 580 aa12.05□□□□□ -0.48
COLCA1-203ENST00000532918 CALUO43852 315 aaPredicted RBP12.05□□□□□ -0.48
COLCA1-203ENST00000532918 USP14P54578 494 aa12.05□□□□□ -0.48
COLCA1-203ENST00000532918 UBASH3AP57075 661 aa12.05□□□□□ -0.48
COLCA1-203ENST00000532918 UBE4AQ14139 1066 aa12.05□□□□□ -0.48
COLCA1-203ENST00000532918 HLTFQ14527 1009 aaKnown RBP eCLIP12.05□□□□□ -0.48
COLCA1-203ENST00000532918 TIGD1Q96MW7 591 aa12.05□□□□□ -0.48
COLCA1-203ENST00000532918 ZNF532Q9HCE3 1301 aa12.05□□□□□ -0.48
COLCA1-203ENST00000532918 F13A1P00488 732 aa12.04□□□□□ -0.48
COLCA1-203ENST00000532918 EEF2P13639 858 aaKnown RBP12.04□□□□□ -0.48
COLCA1-203ENST00000532918 MNAT1P51948 309 aa12.04□□□□□ -0.48
COLCA1-203ENST00000532918 KIAA1524Q8TCG1 905 aa12.04□□□□□ -0.48
COLCA1-203ENST00000532918 KIFC2Q96AC6 838 aa12.04□□□□□ -0.48
COLCA1-203ENST00000532918 HAUS2Q9NVX0 235 aa12.04□□□□□ -0.48
COLCA1-203ENST00000532918 KIF24Q5T7B8 1368 aa12.04□□□□□ -0.48
COLCA1-203ENST00000532918 TCP10L2B9ZVM9 353 aa12.04□□□□□ -0.48
COLCA1-203ENST00000532918 SPECC1Q5M775 1068 aa12.04□□□□□ -0.48
COLCA1-203ENST00000532918 OTUD6BQ8N6M0 293 aa12.04□□□□□ -0.48
COLCA1-203ENST00000532918 MLXIPQ9HAP2 919 aa12.04□□□□□ -0.48
COLCA1-203ENST00000532918 CFBP00751 764 aa12.04□□□□□ -0.48
COLCA1-203ENST00000532918 ISM2Q6H9L7 571 aa12.04□□□□□ -0.48
COLCA1-203ENST00000532918 ZSCAN30Q86W11 494 aa12.04□□□□□ -0.48
COLCA1-203ENST00000532918 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.04□□□□□ -0.48
COLCA1-203ENST00000532918 DNAJC5Q9H3Z4 198 aa12.04□□□□□ -0.48
COLCA1-203ENST00000532918 PRKAG2Q9UGJ0 569 aa12.04□□□□□ -0.48
COLCA1-203ENST00000532918 GINS2Q9Y248 185 aa12.04□□□□□ -0.48
COLCA1-203ENST00000532918 GAS8O95995 478 aa12.04□□□□□ -0.48
COLCA1-203ENST00000532918 RBM6P78332 1123 aaKnown RBP12.04□□□□□ -0.48
COLCA1-203ENST00000532918 DOK7Q18PE1 504 aa12.04□□□□□ -0.48
COLCA1-203ENST00000532918 KIAA0825Q8IV33 1275 aa12.04□□□□□ -0.48
COLCA1-203ENST00000532918 LLPHQ9BRT6 129 aaKnown RBP12.04□□□□□ -0.48
COLCA1-203ENST00000532918 PTPRTO14522 1441 aa12.03□□□□□ -0.48
COLCA1-203ENST00000532918 ZNF804BA4D1E1 1349 aa12.03□□□□□ -0.48
COLCA1-203ENST00000532918 CCNT1O60563 726 aaKnown RBP12.03□□□□□ -0.48
COLCA1-203ENST00000532918 HARSP12081 509 aaKnown RBP12.03□□□□□ -0.48
COLCA1-203ENST00000532918 CNGA1P29973 690 aa12.03□□□□□ -0.48
COLCA1-203ENST00000532918 TFAP4Q01664 338 aa12.03□□□□□ -0.48
COLCA1-203ENST00000532918 CKAP4Q07065 602 aaKnown RBP12.03□□□□□ -0.48
COLCA1-203ENST00000532918 CERKLQ49MI3 558 aaPredicted RBP12.03□□□□□ -0.48
COLCA1-203ENST00000532918 CCDC14Q49A88 953 aa12.03□□□□□ -0.48
COLCA1-203ENST00000532918 FAM47CQ5HY64 1035 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms