RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 SAMD7Q7Z3H4 446 aa17.11■□□□□ 0.33
COL16A1-217ENST00000532877 TEX11Q8IYF3 940 aa17.11■□□□□ 0.33
COL16A1-217ENST00000532877 SDR42E1Q8WUS8 393 aa17.11■□□□□ 0.33
COL16A1-217ENST00000532877 DSCC1Q9BVC3 393 aa17.11■□□□□ 0.33
COL16A1-217ENST00000532877 EPB41L4AQ9HCS5 686 aaPredicted RBP17.11■□□□□ 0.33
COL16A1-217ENST00000532877 USP40Q9NVE5 1235 aa17.11■□□□□ 0.33
COL16A1-217ENST00000532877 BAZ2AQ9UIF9 1905 aaKnown RBP17.1■□□□□ 0.33
COL16A1-217ENST00000532877 GSG1L2A8MUP6 293 aa17.1■□□□□ 0.33
COL16A1-217ENST00000532877 WNT10BO00744 389 aa17.1■□□□□ 0.33
COL16A1-217ENST00000532877 DEFB115Q30KQ5 88 aa17.1■□□□□ 0.33
COL16A1-217ENST00000532877 TBC1D10BQ4KMP7 808 aaPredicted RBP17.1■□□□□ 0.33
COL16A1-217ENST00000532877 TRPM4Q8TD43 1214 aa17.1■□□□□ 0.33
COL16A1-217ENST00000532877 TDRD3Q9H7E2 651 aaKnown RBP17.1■□□□□ 0.33
COL16A1-217ENST00000532877 WDR33Q9C0J8 1336 aaKnown RBP17.1■□□□□ 0.33
COL16A1-217ENST00000532877 RPAP1Q9BWH6 1393 aaPredicted RBP17.1■□□□□ 0.33
COL16A1-217ENST00000532877 LAMA4Q16363 1823 aa17.1■□□□□ 0.33
COL16A1-217ENST00000532877 PATL2C9JE40 543 aaKnown RBP17.09■□□□□ 0.33
COL16A1-217ENST00000532877 WDHD1O75717 1129 aaPredicted RBP17.09■□□□□ 0.33
COL16A1-217ENST00000532877 APPP05067 770 aa17.09■□□□□ 0.33
COL16A1-217ENST00000532877 NBPF9Q3BBW0 867 aa17.09■□□□□ 0.33
COL16A1-217ENST00000532877 RBM26Q5T8P6 1007 aaKnown RBP17.09■□□□□ 0.33
COL16A1-217ENST00000532877 MAP4K1Q92918 833 aa17.09■□□□□ 0.33
COL16A1-217ENST00000532877 LAMB1P07942 1786 aa17.09■□□□□ 0.33
COL16A1-217ENST00000532877 CASP8AP2Q9UKL3 1982 aa17.09■□□□□ 0.33
COL16A1-217ENST00000532877 ZMYM6O95789 1325 aa17.08■□□□□ 0.32
COL16A1-217ENST00000532877 FLT1P17948 1338 aa17.08■□□□□ 0.32
COL16A1-217ENST00000532877 EPB41L2O43491 1005 aaKnown RBP17.08■□□□□ 0.32
COL16A1-217ENST00000532877 USP5P45974 858 aa17.08■□□□□ 0.32
COL16A1-217ENST00000532877 CACNB3P54284 484 aa17.08■□□□□ 0.32
COL16A1-217ENST00000532877 MAP2K1Q02750 393 aaPredicted RBP17.08■□□□□ 0.32
COL16A1-217ENST00000532877 SPDYE2Q495Y8 402 aa17.08■□□□□ 0.32
COL16A1-217ENST00000532877 IFNL3Q8IZI9 196 aa17.08■□□□□ 0.32
COL16A1-217ENST00000532877 TGFBRAP1Q8WUH2 860 aa17.08■□□□□ 0.32
COL16A1-217ENST00000532877 USP26Q9BXU7 913 aa17.08■□□□□ 0.32
COL16A1-217ENST00000532877 DCP1AQ9NPI6 582 aaPredicted RBP17.08■□□□□ 0.32
COL16A1-217ENST00000532877 ADARB2Q9NS39 739 aaKnown RBP17.08■□□□□ 0.32
COL16A1-217ENST00000532877 ATP8A2Q9NTI2 1148 aa17.08■□□□□ 0.32
COL16A1-217ENST00000532877 HACL1Q9UJ83 578 aa17.08■□□□□ 0.32
COL16A1-217ENST00000532877 RBM8AQ9Y5S9 174 aaKnown RBP17.08■□□□□ 0.32
COL16A1-217ENST00000532877 CLRN2A0PK11 232 aa17.07■□□□□ 0.32
COL16A1-217ENST00000532877 MYO1BO43795 1136 aa17.07■□□□□ 0.32
COL16A1-217ENST00000532877 EPHX2P34913 555 aa17.07■□□□□ 0.32
COL16A1-217ENST00000532877 MLLT1Q03111 559 aaPredicted RBP17.07■□□□□ 0.32
COL16A1-217ENST00000532877 NFIAQ12857 509 aa17.07■□□□□ 0.32
COL16A1-217ENST00000532877 ALX1Q15699 326 aa17.07■□□□□ 0.32
COL16A1-217ENST00000532877 GIMAP6Q6P9H5 292 aa17.07■□□□□ 0.32
COL16A1-217ENST00000532877 MAPKAPK5Q8IW41 473 aa17.07■□□□□ 0.32
COL16A1-217ENST00000532877 IDI2Q9BXS1 227 aa17.07■□□□□ 0.32
COL16A1-217ENST00000532877 NACAP1Q9BZK3 213 aa17.07■□□□□ 0.32
COL16A1-217ENST00000532877 NAPBQ9H115 298 aa17.07■□□□□ 0.32
COL16A1-217ENST00000532877 DDX4Q9NQI0 724 aaKnown RBP17.07■□□□□ 0.32
COL16A1-217ENST00000532877 TMOD2Q9NZR1 351 aa17.07■□□□□ 0.32
COL16A1-217ENST00000532877 ZNF70Q9UC06 446 aaPredicted RBP17.07■□□□□ 0.32
COL16A1-217ENST00000532877 U3KPZ7 1027 aaPredicted RBP17.07■□□□□ 0.32
COL16A1-217ENST00000532877 MYH1P12882 1939 aa17.07■□□□□ 0.32
COL16A1-217ENST00000532877 ASTN2O75129 1339 aaPredicted RBP17.06■□□□□ 0.32
COL16A1-217ENST00000532877 FGAP02671 866 aa17.06■□□□□ 0.32
COL16A1-217ENST00000532877 TDO2P48775 406 aa17.06■□□□□ 0.32
COL16A1-217ENST00000532877 PICALMQ13492 652 aa17.06■□□□□ 0.32
COL16A1-217ENST00000532877 UPF2Q9HAU5 1272 aaKnown RBP17.06■□□□□ 0.32
COL16A1-217ENST00000532877 HIRAP54198 1017 aaPredicted RBP17.05■□□□□ 0.32
COL16A1-217ENST00000532877 MAP1SQ66K74 1059 aaPredicted RBP17.05■□□□□ 0.32
COL16A1-217ENST00000532877 DDRGK1Q96HY6 314 aa17.05■□□□□ 0.32
COL16A1-217ENST00000532877 VEZTQ9HBM0 779 aa17.05■□□□□ 0.32
COL16A1-217ENST00000532877 FAM198AQ9UFP1 575 aa17.05■□□□□ 0.32
COL16A1-217ENST00000532877 NPM3O75607 178 aaKnown RBP17.04■□□□□ 0.32
COL16A1-217ENST00000532877 HSPA4P34932 840 aa17.04■□□□□ 0.32
COL16A1-217ENST00000532877 EAPPQ56P03 285 aaPredicted RBP17.04■□□□□ 0.32
COL16A1-217ENST00000532877 FKBP1CQ5VVH2 108 aa17.04■□□□□ 0.32
COL16A1-217ENST00000532877 PNMA8AQ86V59 439 aaPredicted RBP17.04■□□□□ 0.32
COL16A1-217ENST00000532877 OSBPL5Q9H0X9 879 aaPredicted RBP17.04■□□□□ 0.32
COL16A1-217ENST00000532877 MCM9Q9NXL9 1143 aa17.04■□□□□ 0.32
COL16A1-217ENST00000532877 ARPP21Q9UBL0 812 aaPredicted RBP17.04■□□□□ 0.32
COL16A1-217ENST00000532877 CTNNA3Q9UI47 895 aa17.04■□□□□ 0.32
COL16A1-217ENST00000532877 COL2A1P02458 1487 aaPredicted RBP17.04■□□□□ 0.32
COL16A1-217ENST00000532877 TCP10L2B9ZVM9 353 aa17.03■□□□□ 0.32
COL16A1-217ENST00000532877 MCCP23508 829 aa17.03■□□□□ 0.32
COL16A1-217ENST00000532877 NECTIN1Q15223 517 aa17.03■□□□□ 0.32
COL16A1-217ENST00000532877 CREB3L3Q68CJ9 461 aa17.03■□□□□ 0.32
COL16A1-217ENST00000532877 CTR9Q6PD62 1173 aa17.03■□□□□ 0.32
COL16A1-217ENST00000532877 USP50Q70EL3 339 aaPredicted RBP17.03■□□□□ 0.32
COL16A1-217ENST00000532877 C22orf23Q9BZE7 217 aa17.03■□□□□ 0.32
COL16A1-217ENST00000532877 GGA3Q9NZ52 723 aa17.03■□□□□ 0.32
COL16A1-217ENST00000532877 SAP30BPQ9UHR5 308 aaKnown RBP17.03■□□□□ 0.32
COL16A1-217ENST00000532877 USP17L12C9JPN9 530 aa17.02■□□□□ 0.32
COL16A1-217ENST00000532877 USP17L21D6R901 530 aa17.02■□□□□ 0.32
COL16A1-217ENST00000532877 SLC27A2O14975 620 aa17.02■□□□□ 0.32
COL16A1-217ENST00000532877 ENTPD3O75355 529 aa17.02■□□□□ 0.32
COL16A1-217ENST00000532877 CYP21A2P08686 494 aa17.02■□□□□ 0.32
COL16A1-217ENST00000532877 TCP10Q12799 353 aa17.02■□□□□ 0.32
COL16A1-217ENST00000532877 IMMTQ16891 758 aaKnown RBP17.02■□□□□ 0.32
COL16A1-217ENST00000532877 ANGEL2Q5VTE6 544 aaKnown RBP17.02■□□□□ 0.32
COL16A1-217ENST00000532877 ZFPM1Q8IX07 1006 aa17.02■□□□□ 0.32
COL16A1-217ENST00000532877 TBC1D32Q96NH3 1257 aa17.02■□□□□ 0.32
COL16A1-217ENST00000532877 PALD1Q9ULE6 856 aa17.02■□□□□ 0.32
COL16A1-217ENST00000532877 SIPA1L1O43166 1804 aa17.02■□□□□ 0.31
COL16A1-217ENST00000532877 ATRNL1Q5VV63 1379 aa17.02■□□□□ 0.31
COL16A1-217ENST00000532877 CYP2D7A0A087X1C5 515 aa17.01■□□□□ 0.31
COL16A1-217ENST00000532877 CYP2D6P10635 497 aa17.01■□□□□ 0.31
COL16A1-217ENST00000532877 HAND2P61296 217 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms