RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 FOXN1O15353 648 aa12.94□□□□□ -0.34
NXF1-211ENST00000531709 CLCN6P51797 869 aa12.94□□□□□ -0.34
NXF1-211ENST00000531709 ZNF174Q15697 407 aa12.94□□□□□ -0.34
NXF1-211ENST00000531709 TAF3Q5VWG9 929 aa12.94□□□□□ -0.34
NXF1-211ENST00000531709 NUTM2AQ8IVF1 878 aaPredicted RBP12.94□□□□□ -0.34
NXF1-211ENST00000531709 AK7Q96M32 723 aa12.94□□□□□ -0.34
NXF1-211ENST00000531709 TIGD1Q96MW7 591 aa12.94□□□□□ -0.34
NXF1-211ENST00000531709 SRRTQ9BXP5 876 aaKnown RBP12.94□□□□□ -0.34
NXF1-211ENST00000531709 CALCOCO1Q9P1Z2 691 aa12.94□□□□□ -0.34
NXF1-211ENST00000531709 ZMYM6O95789 1325 aa12.94□□□□□ -0.34
NXF1-211ENST00000531709 TRIM75PA6NK02 468 aa12.94□□□□□ -0.34
NXF1-211ENST00000531709 RHOXF2BP0C7M4 288 aa12.94□□□□□ -0.34
NXF1-211ENST00000531709 TXLNAP40222 546 aa12.94□□□□□ -0.34
NXF1-211ENST00000531709 MCAMP43121 646 aa12.94□□□□□ -0.34
NXF1-211ENST00000531709 NR5A1Q13285 461 aa12.94□□□□□ -0.34
NXF1-211ENST00000531709 SYCP1Q15431 976 aa12.94□□□□□ -0.34
NXF1-211ENST00000531709 CADPS2Q86UW7 1296 aa12.94□□□□□ -0.34
NXF1-211ENST00000531709 RHOXF2Q9BQY4 288 aa12.94□□□□□ -0.34
NXF1-211ENST00000531709 PHACTR2O75167 634 aa12.94□□□□□ -0.34
NXF1-211ENST00000531709 FAM193AP78312 1265 aa12.94□□□□□ -0.34
NXF1-211ENST00000531709 CYB5R4Q7L1T6 521 aa12.94□□□□□ -0.34
NXF1-211ENST00000531709 IQCA1Q86XH1 822 aa12.94□□□□□ -0.34
NXF1-211ENST00000531709 TBC1D10CQ8IV04 446 aa12.94□□□□□ -0.34
NXF1-211ENST00000531709 NOSTRINQ8IVI9 506 aa12.94□□□□□ -0.34
NXF1-211ENST00000531709 OSBPL5Q9H0X9 879 aaPredicted RBP12.94□□□□□ -0.34
NXF1-211ENST00000531709 RNF41Q9H4P4 317 aaPredicted RBP12.94□□□□□ -0.34
NXF1-211ENST00000531709 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.94□□□□□ -0.341e-6■■□□□ 13.7
NXF1-211ENST00000531709 VWA3AA6NCI4 1184 aa12.93□□□□□ -0.34
NXF1-211ENST00000531709 ERLIN1O75477 346 aa12.93□□□□□ -0.34
NXF1-211ENST00000531709 CDC27P30260 824 aa12.93□□□□□ -0.34
NXF1-211ENST00000531709 NLRP5P59047 1200 aa12.93□□□□□ -0.34
NXF1-211ENST00000531709 RRAGBQ5VZM2 374 aa12.93□□□□□ -0.34
NXF1-211ENST00000531709 SPECC1LQ69YQ0 1117 aa12.93□□□□□ -0.34
NXF1-211ENST00000531709 MB21D2Q8IYB1 491 aaPredicted RBP12.93□□□□□ -0.34
NXF1-211ENST00000531709 IGSF22Q8N9C0 903 aa12.93□□□□□ -0.34
NXF1-211ENST00000531709 CNNM2Q9H8M5 875 aa12.93□□□□□ -0.34
NXF1-211ENST00000531709 ASAP1Q9ULH1 1129 aa12.93□□□□□ -0.34
NXF1-211ENST00000531709 UBE2Q2LH0YL09 131 aa12.93□□□□□ -0.34
NXF1-211ENST00000531709 RILPL1Q5EBL4 403 aa12.93□□□□□ -0.34
NXF1-211ENST00000531709 KANK3Q6NY19 840 aa12.93□□□□□ -0.34
NXF1-211ENST00000531709 CATIPQ7Z7H3 387 aa12.93□□□□□ -0.34
NXF1-211ENST00000531709 VPS54Q9P1Q0 977 aa12.93□□□□□ -0.34
NXF1-211ENST00000531709 NAP1L1P55209 391 aaKnown RBP12.93□□□□□ -0.34
NXF1-211ENST00000531709 ILDR1Q86SU0 546 aaPredicted RBP12.93□□□□□ -0.34
NXF1-211ENST00000531709 SENP2Q9HC62 589 aa12.93□□□□□ -0.34
NXF1-211ENST00000531709 GNL3LQ9NVN8 582 aaKnown RBP12.93□□□□□ -0.34
NXF1-211ENST00000531709 ZSWIM5Q9P217 1185 aa12.93□□□□□ -0.34
NXF1-211ENST00000531709 AKR1B15C9JRZ8 316 aaPredicted RBP12.92□□□□□ -0.34
NXF1-211ENST00000531709 PRKAB2O43741 272 aa12.92□□□□□ -0.34
NXF1-211ENST00000531709 CIAO1O76071 339 aa12.92□□□□□ -0.34
NXF1-211ENST00000531709 TUBB4AP04350 444 aa12.92□□□□□ -0.34
NXF1-211ENST00000531709 LEKR1Q6ZMV7 388 aa12.92□□□□□ -0.34
NXF1-211ENST00000531709 IFNL3Q8IZI9 196 aa12.92□□□□□ -0.34
NXF1-211ENST00000531709 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.92□□□□□ -0.34
NXF1-211ENST00000531709 VPS16Q9H269 839 aa12.92□□□□□ -0.34
NXF1-211ENST00000531709 V9GY48 417 aaPredicted RBP12.92□□□□□ -0.34
NXF1-211ENST00000531709 HEG1Q9ULI3 1381 aa12.92□□□□□ -0.34
NXF1-211ENST00000531709 SHC4Q6S5L8 630 aa12.92□□□□□ -0.34
NXF1-211ENST00000531709 NYAP1Q6ZVC0 841 aa12.92□□□□□ -0.34
NXF1-211ENST00000531709 DZIP3Q86Y13 1208 aaKnown RBP12.92□□□□□ -0.34
NXF1-211ENST00000531709 SMYD4Q8IYR2 804 aaPredicted RBP12.92□□□□□ -0.34
NXF1-211ENST00000531709 CTCFLQ8NI51 663 aaPredicted RBP12.92□□□□□ -0.34
NXF1-211ENST00000531709 TEX13AQ9BXU3 409 aaPredicted RBP12.92□□□□□ -0.34
NXF1-211ENST00000531709 PIH1D3Q9NQM4 214 aaKnown RBP12.92□□□□□ -0.34
NXF1-211ENST00000531709 SAMSN1Q9NSI8 373 aaKnown RBP12.92□□□□□ -0.34
NXF1-211ENST00000531709 MAGEC2Q9UBF1 373 aaPredicted RBP12.92□□□□□ -0.34
NXF1-211ENST00000531709 IKBKBO14920 756 aa12.92□□□□□ -0.34
NXF1-211ENST00000531709 MARCH6O60337 910 aa12.92□□□□□ -0.34
NXF1-211ENST00000531709 TERF2Q15554 542 aa12.92□□□□□ -0.34
NXF1-211ENST00000531709 IFIT1BQ5T764 474 aaKnown RBP12.92□□□□□ -0.34
NXF1-211ENST00000531709 GOLGA1Q92805 767 aa12.92□□□□□ -0.34
NXF1-211ENST00000531709 ADGRL3Q9HAR2 1447 aa12.92□□□□□ -0.34
NXF1-211ENST00000531709 NRXN3Q9Y4C0 1643 aa12.91□□□□□ -0.34
NXF1-211ENST00000531709 EIF5P55010 431 aaKnown RBP12.91□□□□□ -0.34
NXF1-211ENST00000531709 ANTXR2P58335 489 aa12.91□□□□□ -0.34
NXF1-211ENST00000531709 ZBTB38Q8NAP3 1195 aaPredicted RBP12.91□□□□□ -0.34
NXF1-211ENST00000531709 ESR2Q92731 530 aa12.91□□□□□ -0.34
NXF1-211ENST00000531709 PLIN2Q99541 437 aa12.91□□□□□ -0.34
NXF1-211ENST00000531709 ADD2P35612 726 aa12.91□□□□□ -0.34
NXF1-211ENST00000531709 MLKLQ8NB16 471 aa12.91□□□□□ -0.34
NXF1-211ENST00000531709 SPATA5Q8NB90 893 aa12.91□□□□□ -0.34
NXF1-211ENST00000531709 CASP1P29466 404 aa12.91□□□□□ -0.34
NXF1-211ENST00000531709 AKNAD1Q5T1N1 836 aa12.91□□□□□ -0.34
NXF1-211ENST00000531709 NBPF11Q86T75 865 aa12.91□□□□□ -0.34
NXF1-211ENST00000531709 SDR42E1Q8WUS8 393 aa12.91□□□□□ -0.34
NXF1-211ENST00000531709 SH2B2O14492 632 aaPredicted RBP12.9□□□□□ -0.34
NXF1-211ENST00000531709 MCM7P33993 719 aa12.9□□□□□ -0.34
NXF1-211ENST00000531709 KIAA1328Q86T90 577 aa12.9□□□□□ -0.34
NXF1-211ENST00000531709 NEK11Q8NG66 645 aa12.9□□□□□ -0.34
NXF1-211ENST00000531709 BLZF1Q9H2G9 400 aa12.9□□□□□ -0.34
NXF1-211ENST00000531709 JAG2Q9Y219 1238 aa12.9□□□□□ -0.34
NXF1-211ENST00000531709 RAD21O60216 631 aa12.9□□□□□ -0.34
NXF1-211ENST00000531709 DEXIO95424 95 aa12.9□□□□□ -0.34
NXF1-211ENST00000531709 HPS5Q9UPZ3 1129 aa12.9□□□□□ -0.34
NXF1-211ENST00000531709 PCDHB6Q9Y5E3 794 aa12.9□□□□□ -0.34
NXF1-211ENST00000531709 MORC2Q9Y6X9 1032 aaPredicted RBP12.9□□□□□ -0.34
NXF1-211ENST00000531709 MROH7-TTC4A0A0A0MT08 1334 aa12.9□□□□□ -0.34
NXF1-211ENST00000531709 PATL2C9JE40 543 aaKnown RBP12.9□□□□□ -0.34
NXF1-211ENST00000531709 PPP6R2O75170 966 aa12.9□□□□□ -0.34
NXF1-211ENST00000531709 EIF3JO75822 258 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms