RNA–Protein interactions for RNA: ENST00000531502.5

CTSB-221, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-221ENST00000531502 SCYL3Q8IZE3 742 aa17.92■□□□□ 0.46
CTSB-221ENST00000531502 PARK7Q99497 189 aaKnown RBP17.92■□□□□ 0.46
CTSB-221ENST00000531502 LRRFIP2Q9Y608 721 aaKnown RBP17.92■□□□□ 0.46
CTSB-221ENST00000531502 PHIPQ8WWQ0 1821 aa17.92■□□□□ 0.46
CTSB-221ENST00000531502 MYPNQ86TC9 1320 aa17.92■□□□□ 0.46
CTSB-221ENST00000531502 SLURP2P0DP57 97 aa17.91■□□□□ 0.46
CTSB-221ENST00000531502 RAET1EQ8TD07 263 aa17.91■□□□□ 0.46
CTSB-221ENST00000531502 FAM163AQ96GL9 167 aaPredicted RBP17.91■□□□□ 0.46
CTSB-221ENST00000531502 DDX4Q9NQI0 724 aaKnown RBP17.91■□□□□ 0.46
CTSB-221ENST00000531502 NOB1Q9ULX3 412 aaKnown RBP17.91■□□□□ 0.46
CTSB-221ENST00000531502 AFG3L2Q9Y4W6 797 aa17.91■□□□□ 0.46
CTSB-221ENST00000531502 ZHX2Q9Y6X8 837 aa17.91■□□□□ 0.46
CTSB-221ENST00000531502 TRIOBPQ9H2D6 2365 aa17.91■□□□□ 0.46
CTSB-221ENST00000531502 DDTLA6NHG4 134 aaPredicted RBP17.9■□□□□ 0.46
CTSB-221ENST00000531502 GJB1P08034 283 aa17.9■□□□□ 0.46
CTSB-221ENST00000531502 CCL5P13501 91 aa17.9■□□□□ 0.46
CTSB-221ENST00000531502 GJA8P48165 433 aa17.9■□□□□ 0.46
CTSB-221ENST00000531502 TIMM10P62072 90 aa17.9■□□□□ 0.46
CTSB-221ENST00000531502 PRKCZQ05513 592 aa17.9■□□□□ 0.46
CTSB-221ENST00000531502 RASGRF1Q13972 1273 aa17.9■□□□□ 0.46
CTSB-221ENST00000531502 ZGPATQ8N5A5 531 aaKnown RBP17.9■□□□□ 0.46
CTSB-221ENST00000531502 GABRQQ9UN88 632 aa17.9■□□□□ 0.46
CTSB-221ENST00000531502 PDS5AQ29RF7 1337 aaKnown RBP17.9■□□□□ 0.46
CTSB-221ENST00000531502 FCGRTP55899 365 aa17.89■□□□□ 0.45
CTSB-221ENST00000531502 FASTKD5Q7L8L6 764 aaKnown RBP17.89■□□□□ 0.45
CTSB-221ENST00000531502 NKX2-3Q8TAU0 364 aa17.89■□□□□ 0.45
CTSB-221ENST00000531502 MEIS3Q99687 375 aa17.89■□□□□ 0.45
CTSB-221ENST00000531502 DOCK1Q14185 1865 aa17.88■□□□□ 0.45
CTSB-221ENST00000531502 CT47B1P0C2W7 299 aaPredicted RBP17.88■□□□□ 0.45
CTSB-221ENST00000531502 ZNF384Q8TF68 577 aa17.88■□□□□ 0.45
CTSB-221ENST00000531502 PICK1Q9NRD5 415 aa17.88■□□□□ 0.45
CTSB-221ENST00000531502 SLC45A1Q9Y2W3 748 aa17.88■□□□□ 0.45
CTSB-221ENST00000531502 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.88■□□□□ 0.45
CTSB-221ENST00000531502 CTNND1O60716 968 aaKnown RBP17.87■□□□□ 0.45
CTSB-221ENST00000531502 RHBDL3P58872 404 aa17.87■□□□□ 0.45
CTSB-221ENST00000531502 SLAIN1Q8ND83 568 aa17.87■□□□□ 0.45
CTSB-221ENST00000531502 API5Q9BZZ5 524 aaKnown RBP17.87■□□□□ 0.45
CTSB-221ENST00000531502 RNF208Q9H0X6 261 aa17.87■□□□□ 0.45
CTSB-221ENST00000531502 ABCF2Q9UG63 623 aa17.87■□□□□ 0.45
CTSB-221ENST00000531502 GPR75-ASB3A0A0A6YYF3 556 aa17.86■□□□□ 0.45
CTSB-221ENST00000531502 A0A1B0GUL7 405 aa17.86■□□□□ 0.45
CTSB-221ENST00000531502 BTDP43251 543 aa17.86■□□□□ 0.45
CTSB-221ENST00000531502 GADL1Q6ZQY3 521 aa17.86■□□□□ 0.45
CTSB-221ENST00000531502 DZIP1Q86YF9 867 aaKnown RBP17.86■□□□□ 0.45
CTSB-221ENST00000531502 XAGE2Q96GT9 111 aa17.86■□□□□ 0.45
CTSB-221ENST00000531502 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.86■□□□□ 0.45
CTSB-221ENST00000531502 HDAC5Q9UQL6 1122 aa17.86■□□□□ 0.45
CTSB-221ENST00000531502 MROH7-TTC4A0A0A0MT08 1334 aa17.86■□□□□ 0.45
CTSB-221ENST00000531502 DOCK3Q8IZD9 2030 aa17.86■□□□□ 0.45
CTSB-221ENST00000531502 UBXN2AP68543 259 aa17.85■□□□□ 0.45
CTSB-221ENST00000531502 MECOMQ03112 1051 aa17.85■□□□□ 0.45
CTSB-221ENST00000531502 TFCP2Q12800 502 aa17.85■□□□□ 0.45
CTSB-221ENST00000531502 MTX1Q13505 466 aa17.85■□□□□ 0.45
CTSB-221ENST00000531502 SPTY2D1Q68D10 685 aaPredicted RBP17.85■□□□□ 0.45
CTSB-221ENST00000531502 CHRDL2Q6WN34 429 aa17.85■□□□□ 0.45
CTSB-221ENST00000531502 CCDC84Q86UT8 332 aaPredicted RBP17.85■□□□□ 0.45
CTSB-221ENST00000531502 ZSCAN29Q8IWY8 852 aaPredicted RBP17.85■□□□□ 0.45
CTSB-221ENST00000531502 SLF2Q8IX21 1173 aa17.85■□□□□ 0.45
CTSB-221ENST00000531502 U2AF1L4Q8WU68 220 aaKnown RBP17.85■□□□□ 0.45
CTSB-221ENST00000531502 DPF3Q92784 378 aa17.85■□□□□ 0.45
CTSB-221ENST00000531502 UNC93B1Q9H1C4 597 aa17.85■□□□□ 0.45
CTSB-221ENST00000531502 SZT2Q5T011 3432 aa17.84■□□□□ 0.45
CTSB-221ENST00000531502 ADCY3O60266 1144 aa17.84■□□□□ 0.45
CTSB-221ENST00000531502 TBC1D12O60347 775 aa17.84■□□□□ 0.45
CTSB-221ENST00000531502 NPM3O75607 178 aaKnown RBP17.84■□□□□ 0.45
CTSB-221ENST00000531502 FLT3LGP49771 235 aa17.84■□□□□ 0.45
CTSB-221ENST00000531502 PICALMQ13492 652 aa17.84■□□□□ 0.45
CTSB-221ENST00000531502 PRO3102Q9H379 93 aa17.84■□□□□ 0.45
CTSB-221ENST00000531502 RBM27Q9P2N5 1060 aaKnown RBP17.84■□□□□ 0.45
CTSB-221ENST00000531502 BIN2Q9UBW5 565 aaPredicted RBP17.84■□□□□ 0.45
CTSB-221ENST00000531502 RANBP2P49792 3224 aaKnown RBP17.84■□□□□ 0.45
CTSB-221ENST00000531502 TRIM75PA6NK02 468 aa17.83■□□□□ 0.44
CTSB-221ENST00000531502 SGPL1O95470 568 aa17.83■□□□□ 0.44
CTSB-221ENST00000531502 RARSP54136 660 aaKnown RBP17.83■□□□□ 0.44
CTSB-221ENST00000531502 IRF5Q13568 498 aa17.83■□□□□ 0.44
CTSB-221ENST00000531502 ERICH6Q7L0X2 663 aa17.83■□□□□ 0.44
CTSB-221ENST00000531502 PXYLP1Q8TE99 480 aa17.83■□□□□ 0.44
CTSB-221ENST00000531502 HMG20BQ9P0W2 317 aa17.83■□□□□ 0.44
CTSB-221ENST00000531502 AGTPBP1Q9UPW5 1226 aa17.83■□□□□ 0.44
CTSB-221ENST00000531502 AKAP2Q9Y2D5 859 aa17.83■□□□□ 0.44
CTSB-221ENST00000531502 SRGAP3O43295 1099 aa17.82■□□□□ 0.44
CTSB-221ENST00000531502 ELNP15502 786 aa17.82■□□□□ 0.44
CTSB-221ENST00000531502 MVPQ14764 893 aaKnown RBP17.82■□□□□ 0.44
CTSB-221ENST00000531502 TREML2Q5T2D2 321 aa17.82■□□□□ 0.44
CTSB-221ENST00000531502 PI16Q6UXB8 463 aa17.82■□□□□ 0.44
CTSB-221ENST00000531502 ARHGAP45Q92619 1136 aa17.82■□□□□ 0.44
CTSB-221ENST00000531502 NSUN4Q96CB9 384 aaKnown RBP17.82■□□□□ 0.44
CTSB-221ENST00000531502 HTATIP2Q9BUP3 242 aa17.82■□□□□ 0.44
CTSB-221ENST00000531502 COL2A1P02458 1487 aaPredicted RBP17.82■□□□□ 0.44
CTSB-221ENST00000531502 LOC285556D6RIA3 1793 aa17.81■□□□□ 0.44
CTSB-221ENST00000531502 FAM196BA6NMK8 535 aa17.81■□□□□ 0.44
CTSB-221ENST00000531502 TNPO2O14787 897 aaKnown RBP17.81■□□□□ 0.44
CTSB-221ENST00000531502 FARP2O94887 1054 aaPredicted RBP17.81■□□□□ 0.44
CTSB-221ENST00000531502 INHAP05111 366 aa17.81■□□□□ 0.44
CTSB-221ENST00000531502 GNAI3P08754 354 aa17.81■□□□□ 0.44
CTSB-221ENST00000531502 SMCR8Q8TEV9 937 aaPredicted RBP17.81■□□□□ 0.44
CTSB-221ENST00000531502 OSBPL5Q9H0X9 879 aaPredicted RBP17.81■□□□□ 0.44
CTSB-221ENST00000531502 ATAD5Q96QE3 1844 aa17.8■□□□□ 0.44
CTSB-221ENST00000531502 MAP4K4O95819 1239 aaPredicted RBP17.8■□□□□ 0.44
CTSB-221ENST00000531502 ARID4AP29374 1257 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms