RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 XAGE2Q96GT9 111 aa22.85■■□□□ 1.25
SSSCA1-206ENST00000531405 DDX4Q9NQI0 724 aaKnown RBP22.85■■□□□ 1.25
SSSCA1-206ENST00000531405 SRRDQ9UH36 339 aa22.85■■□□□ 1.25
SSSCA1-206ENST00000531405 MYO5AQ9Y4I1 1855 aaKnown RBP22.84■■□□□ 1.25
SSSCA1-206ENST00000531405 DDTLA6NHG4 134 aaPredicted RBP22.84■■□□□ 1.25
SSSCA1-206ENST00000531405 SRGAP3O43295 1099 aa22.84■■□□□ 1.25
SSSCA1-206ENST00000531405 ENTPD3O75355 529 aa22.84■■□□□ 1.25
SSSCA1-206ENST00000531405 FMNL1O95466 1100 aaPredicted RBP22.84■■□□□ 1.25
SSSCA1-206ENST00000531405 CYP2C8P10632 490 aa22.84■■□□□ 1.25
SSSCA1-206ENST00000531405 OSBPP22059 807 aa22.84■■□□□ 1.25
SSSCA1-206ENST00000531405 PRMT2P55345 433 aa22.84■■□□□ 1.25
SSSCA1-206ENST00000531405 PICALMQ13492 652 aa22.84■■□□□ 1.25
SSSCA1-206ENST00000531405 SCYL3Q8IZE3 742 aa22.84■■□□□ 1.25
SSSCA1-206ENST00000531405 CDK5RAP2Q96SN8 1893 aa22.83■■□□□ 1.25
SSSCA1-206ENST00000531405 ZBTB22O15209 634 aa22.83■■□□□ 1.25
SSSCA1-206ENST00000531405 BTDP43251 543 aa22.83■■□□□ 1.25
SSSCA1-206ENST00000531405 MTFR1Q15390 333 aa22.83■■□□□ 1.25
SSSCA1-206ENST00000531405 ZHX2Q9Y6X8 837 aa22.83■■□□□ 1.25
SSSCA1-206ENST00000531405 PDS5AQ29RF7 1337 aaKnown RBP22.82■■□□□ 1.24
SSSCA1-206ENST00000531405 CXCL11O14625 94 aa22.82■■□□□ 1.24
SSSCA1-206ENST00000531405 PTPRAP18433 802 aa22.82■■□□□ 1.24
SSSCA1-206ENST00000531405 PARK7Q99497 189 aaKnown RBP22.82■■□□□ 1.24
SSSCA1-206ENST00000531405 PICK1Q9NRD5 415 aa22.82■■□□□ 1.24
SSSCA1-206ENST00000531405 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.82■■□□□ 1.24
SSSCA1-206ENST00000531405 TNNQ9UQP3 1299 aa22.82■■□□□ 1.24
SSSCA1-206ENST00000531405 MROH7-TTC4A0A0A0MT08 1334 aa22.82■■□□□ 1.24
SSSCA1-206ENST00000531405 MYPNQ86TC9 1320 aa22.82■■□□□ 1.24
SSSCA1-206ENST00000531405 A0A0G2JLL6 359 aaPredicted RBP22.81■■□□□ 1.24
SSSCA1-206ENST00000531405 GNAI3P08754 354 aa22.81■■□□□ 1.24
SSSCA1-206ENST00000531405 MECOMQ03112 1051 aa22.81■■□□□ 1.24
SSSCA1-206ENST00000531405 PI16Q6UXB8 463 aa22.81■■□□□ 1.24
SSSCA1-206ENST00000531405 GADL1Q6ZQY3 521 aa22.81■■□□□ 1.24
SSSCA1-206ENST00000531405 PRRT2Q7Z6L0 340 aaPredicted RBP22.81■■□□□ 1.24
SSSCA1-206ENST00000531405 RAET1EQ8TD07 263 aa22.81■■□□□ 1.24
SSSCA1-206ENST00000531405 ZNF384Q8TF68 577 aa22.81■■□□□ 1.24
SSSCA1-206ENST00000531405 AKAP2Q9Y2D5 859 aa22.81■■□□□ 1.24
SSSCA1-206ENST00000531405 TRIOBPQ9H2D6 2365 aa22.81■■□□□ 1.24
SSSCA1-206ENST00000531405 BCRP11274 1271 aa22.8■■□□□ 1.24
SSSCA1-206ENST00000531405 MTX1Q13505 466 aa22.8■■□□□ 1.24
SSSCA1-206ENST00000531405 MVPQ14764 893 aaKnown RBP22.8■■□□□ 1.24
SSSCA1-206ENST00000531405 SPTY2D1Q68D10 685 aaPredicted RBP22.8■■□□□ 1.24
SSSCA1-206ENST00000531405 SLF2Q8IX21 1173 aa22.8■■□□□ 1.24
SSSCA1-206ENST00000531405 ARHGAP45Q92619 1136 aa22.8■■□□□ 1.24
SSSCA1-206ENST00000531405 SHISA4Q96DD7 197 aa22.8■■□□□ 1.24
SSSCA1-206ENST00000531405 FAM163AQ96GL9 167 aaPredicted RBP22.8■■□□□ 1.24
SSSCA1-206ENST00000531405 NEUROD6Q96NK8 337 aa22.8■■□□□ 1.24
SSSCA1-206ENST00000531405 AFG3L2Q9Y4W6 797 aa22.8■■□□□ 1.24
SSSCA1-206ENST00000531405 LOC285556D6RIA3 1793 aa22.79■■□□□ 1.24
SSSCA1-206ENST00000531405 HOXD10P28358 340 aa22.79■■□□□ 1.24
SSSCA1-206ENST00000531405 GRK4P32298 578 aa22.79■■□□□ 1.24
SSSCA1-206ENST00000531405 MAP3K10Q02779 954 aa22.79■■□□□ 1.24
SSSCA1-206ENST00000531405 PRKCZQ05513 592 aa22.79■■□□□ 1.24
SSSCA1-206ENST00000531405 ERICH6Q7L0X2 663 aa22.79■■□□□ 1.24
SSSCA1-206ENST00000531405 CCDC84Q86UT8 332 aaPredicted RBP22.79■■□□□ 1.24
SSSCA1-206ENST00000531405 SIPA1L1O43166 1804 aa22.79■■□□□ 1.24
SSSCA1-206ENST00000531405 MAST2Q6P0Q8 1798 aa22.78■■□□□ 1.24
SSSCA1-206ENST00000531405 FAM196BA6NMK8 535 aa22.78■■□□□ 1.24
SSSCA1-206ENST00000531405 RHBDL3P58872 404 aa22.78■■□□□ 1.24
SSSCA1-206ENST00000531405 TBC1D9Q6ZT07 1266 aa22.78■■□□□ 1.24
SSSCA1-206ENST00000531405 FASTKD5Q7L8L6 764 aaKnown RBP22.78■■□□□ 1.24
SSSCA1-206ENST00000531405 HMG20BQ9P0W2 317 aa22.78■■□□□ 1.24
SSSCA1-206ENST00000531405 FOCADQ5VW36 1801 aa22.78■■□□□ 1.24
SSSCA1-206ENST00000531405 GPR75-ASB3A0A0A6YYF3 556 aa22.77■■□□□ 1.24
SSSCA1-206ENST00000531405 FCGRTP55899 365 aa22.77■■□□□ 1.24
SSSCA1-206ENST00000531405 GABRQQ9UN88 632 aa22.77■■□□□ 1.24
SSSCA1-206ENST00000531405 RANBP2P49792 3224 aaKnown RBP22.76■■□□□ 1.23
SSSCA1-206ENST00000531405 TRIM75PA6NK02 468 aa22.76■■□□□ 1.23
SSSCA1-206ENST00000531405 CTNND1O60716 968 aaKnown RBP22.76■■□□□ 1.23
SSSCA1-206ENST00000531405 TRIM27P14373 513 aa22.76■■□□□ 1.23
SSSCA1-206ENST00000531405 SPATA5Q8NB90 893 aa22.76■■□□□ 1.23
SSSCA1-206ENST00000531405 BIN2Q9UBW5 565 aaPredicted RBP22.76■■□□□ 1.23
SSSCA1-206ENST00000531405 COLQQ9Y215 455 aaPredicted RBP22.76■■□□□ 1.23
SSSCA1-206ENST00000531405 PNMA6EA0A0J9YXQ4 647 aa22.75■■□□□ 1.23
SSSCA1-206ENST00000531405 BCAR3O75815 825 aa22.75■■□□□ 1.23
SSSCA1-206ENST00000531405 CCL5P13501 91 aa22.75■■□□□ 1.23
SSSCA1-206ENST00000531405 GORABQ5T7V8 394 aa22.75■■□□□ 1.23
SSSCA1-206ENST00000531405 FRAT1Q92837 279 aaPredicted RBP22.75■■□□□ 1.23
SSSCA1-206ENST00000531405 SZT2Q5T011 3432 aa22.75■■□□□ 1.23
SSSCA1-206ENST00000531405 H0YGN5 161 aa22.74■■□□□ 1.23
SSSCA1-206ENST00000531405 GNAI2P04899 355 aa22.74■■□□□ 1.23
SSSCA1-206ENST00000531405 CLUAP1Q96AJ1 413 aa22.74■■□□□ 1.23
SSSCA1-206ENST00000531405 NSUN4Q96CB9 384 aaKnown RBP22.74■■□□□ 1.23
SSSCA1-206ENST00000531405 RAI14Q9P0K7 980 aa22.74■■□□□ 1.23
SSSCA1-206ENST00000531405 CCER2I3L3R5 266 aa22.73■■□□□ 1.23
SSSCA1-206ENST00000531405 ARID4AP29374 1257 aaPredicted RBP22.73■■□□□ 1.23
SSSCA1-206ENST00000531405 FXR1P51114 621 aaKnown RBP eCLIP22.73■■□□□ 1.23
SSSCA1-206ENST00000531405 RNF208Q9H0X6 261 aa22.73■■□□□ 1.23
SSSCA1-206ENST00000531405 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.73■■□□□ 1.23
SSSCA1-206ENST00000531405 SLC45A1Q9Y2W3 748 aa22.73■■□□□ 1.23
SSSCA1-206ENST00000531405 IPO8O15397 1037 aaKnown RBP22.72■■□□□ 1.23
SSSCA1-206ENST00000531405 MCAMP43121 646 aa22.72■■□□□ 1.23
SSSCA1-206ENST00000531405 GSTO1P78417 241 aa22.72■■□□□ 1.23
SSSCA1-206ENST00000531405 TREML2Q5T2D2 321 aa22.72■■□□□ 1.23
SSSCA1-206ENST00000531405 ATF7IPQ6VMQ6 1270 aa22.72■■□□□ 1.23
SSSCA1-206ENST00000531405 SMCR8Q8TEV9 937 aaPredicted RBP22.72■■□□□ 1.23
SSSCA1-206ENST00000531405 TBC1D12O60347 775 aa22.71■■□□□ 1.23
SSSCA1-206ENST00000531405 LDHCP07864 332 aa22.71■■□□□ 1.23
SSSCA1-206ENST00000531405 GJB1P08034 283 aa22.71■■□□□ 1.23
SSSCA1-206ENST00000531405 ELNP15502 786 aa22.71■■□□□ 1.23
SSSCA1-206ENST00000531405 GJA8P48165 433 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms