RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 PTPRAP18433 802 aa16.56■□□□□ 0.24
HIF3A-214ENST00000531043 TIMM10P62072 90 aa16.56■□□□□ 0.24
HIF3A-214ENST00000531043 RASGRF1Q13972 1273 aa16.56■□□□□ 0.24
HIF3A-214ENST00000531043 ALDH1L2Q3SY69 923 aa16.56■□□□□ 0.24
HIF3A-214ENST00000531043 CCDC102BQ68D86 513 aa16.56■□□□□ 0.24
HIF3A-214ENST00000531043 CHRDL2Q6WN34 429 aa16.56■□□□□ 0.24
HIF3A-214ENST00000531043 PARK7Q99497 189 aaKnown RBP16.56■□□□□ 0.24
HIF3A-214ENST00000531043 GNL3LQ9NVN8 582 aaKnown RBP16.56■□□□□ 0.24
HIF3A-214ENST00000531043 DENND2AQ9ULE3 1009 aa16.56■□□□□ 0.24
HIF3A-214ENST00000531043 NOB1Q9ULX3 412 aaKnown RBP16.56■□□□□ 0.24
HIF3A-214ENST00000531043 ZHX2Q9Y6X8 837 aa16.56■□□□□ 0.24
HIF3A-214ENST00000531043 DOCK1Q14185 1865 aa16.55■□□□□ 0.24
HIF3A-214ENST00000531043 A0A0G2JLL6 359 aaPredicted RBP16.55■□□□□ 0.24
HIF3A-214ENST00000531043 HOXD10P28358 340 aa16.55■□□□□ 0.24
HIF3A-214ENST00000531043 PRRT2Q7Z6L0 340 aaPredicted RBP16.55■□□□□ 0.24
HIF3A-214ENST00000531043 SCYL3Q8IZE3 742 aa16.55■□□□□ 0.24
HIF3A-214ENST00000531043 ZNF384Q8TF68 577 aa16.55■□□□□ 0.24
HIF3A-214ENST00000531043 DPF3Q92784 378 aa16.55■□□□□ 0.24
HIF3A-214ENST00000531043 MEIS3Q99687 375 aa16.55■□□□□ 0.24
HIF3A-214ENST00000531043 IDI2Q9BXS1 227 aa16.55■□□□□ 0.24
HIF3A-214ENST00000531043 FBXO3Q9UK99 471 aa16.55■□□□□ 0.24
HIF3A-214ENST00000531043 AFG3L2Q9Y4W6 797 aa16.55■□□□□ 0.24
HIF3A-214ENST00000531043 GJB1P08034 283 aa16.54■□□□□ 0.24
HIF3A-214ENST00000531043 IL15P40933 162 aaPredicted RBP16.54■□□□□ 0.24
HIF3A-214ENST00000531043 GJA8P48165 433 aa16.54■□□□□ 0.24
HIF3A-214ENST00000531043 GADL1Q6ZQY3 521 aa16.54■□□□□ 0.24
HIF3A-214ENST00000531043 RNF208Q9H0X6 261 aa16.54■□□□□ 0.24
HIF3A-214ENST00000531043 UNC93B1Q9H1C4 597 aa16.54■□□□□ 0.24
HIF3A-214ENST00000531043 RBM27Q9P2N5 1060 aaKnown RBP16.54■□□□□ 0.24
HIF3A-214ENST00000531043 BIN2Q9UBW5 565 aaPredicted RBP16.54■□□□□ 0.24
HIF3A-214ENST00000531043 FAM196BA6NMK8 535 aa16.53■□□□□ 0.24
HIF3A-214ENST00000531043 SEMA3EO15041 775 aa16.53■□□□□ 0.24
HIF3A-214ENST00000531043 ENTPD3O75355 529 aa16.53■□□□□ 0.24
HIF3A-214ENST00000531043 ELNP15502 786 aa16.53■□□□□ 0.24
HIF3A-214ENST00000531043 FCGRTP55899 365 aa16.53■□□□□ 0.24
HIF3A-214ENST00000531043 MAP3K10Q02779 954 aa16.53■□□□□ 0.24
HIF3A-214ENST00000531043 ZSCAN29Q8IWY8 852 aaPredicted RBP16.53■□□□□ 0.24
HIF3A-214ENST00000531043 TRMT2AQ8IZ69 625 aaKnown RBP16.53■□□□□ 0.24
HIF3A-214ENST00000531043 COPRSQ9NQ92 184 aa16.53■□□□□ 0.24
HIF3A-214ENST00000531043 PICK1Q9NRD5 415 aa16.53■□□□□ 0.24
HIF3A-214ENST00000531043 ABCF2Q9UG63 623 aa16.53■□□□□ 0.24
HIF3A-214ENST00000531043 TRIM75PA6NK02 468 aa16.52■□□□□ 0.24
HIF3A-214ENST00000531043 BTDP43251 543 aa16.52■□□□□ 0.24
HIF3A-214ENST00000531043 RHBDL3P58872 404 aa16.52■□□□□ 0.24
HIF3A-214ENST00000531043 PICALMQ13492 652 aa16.52■□□□□ 0.24
HIF3A-214ENST00000531043 DZIP1Q86YF9 867 aaKnown RBP16.52■□□□□ 0.24
HIF3A-214ENST00000531043 FLT3LGP49771 235 aa16.51■□□□□ 0.23
HIF3A-214ENST00000531043 TFCP2Q12800 502 aa16.51■□□□□ 0.23
HIF3A-214ENST00000531043 PI16Q6UXB8 463 aa16.51■□□□□ 0.23
HIF3A-214ENST00000531043 FASTKD5Q7L8L6 764 aaKnown RBP16.51■□□□□ 0.23
HIF3A-214ENST00000531043 U2AF1L4Q8WU68 220 aaKnown RBP16.51■□□□□ 0.23
HIF3A-214ENST00000531043 FAM163AQ96GL9 167 aaPredicted RBP16.51■□□□□ 0.23
HIF3A-214ENST00000531043 XAGE2Q96GT9 111 aa16.51■□□□□ 0.23
HIF3A-214ENST00000531043 ALPK3Q96L96 1907 aa16.51■□□□□ 0.23
HIF3A-214ENST00000531043 MROH7-TTC4A0A0A0MT08 1334 aa16.5■□□□□ 0.23
HIF3A-214ENST00000531043 A0A1B0GUL7 405 aa16.5■□□□□ 0.23
HIF3A-214ENST00000531043 ZBTB22O15209 634 aa16.5■□□□□ 0.23
HIF3A-214ENST00000531043 ADCY3O60266 1144 aa16.5■□□□□ 0.23
HIF3A-214ENST00000531043 CTNND1O60716 968 aaKnown RBP16.5■□□□□ 0.23
HIF3A-214ENST00000531043 MECOMQ03112 1051 aa16.5■□□□□ 0.23
HIF3A-214ENST00000531043 RRP1BQ14684 758 aaKnown RBP16.5■□□□□ 0.23
HIF3A-214ENST00000531043 TREML2Q5T2D2 321 aa16.5■□□□□ 0.23
HIF3A-214ENST00000531043 ZGPATQ8N5A5 531 aaKnown RBP16.5■□□□□ 0.23
HIF3A-214ENST00000531043 SLAIN1Q8ND83 568 aa16.5■□□□□ 0.23
HIF3A-214ENST00000531043 NKX2-3Q8TAU0 364 aa16.5■□□□□ 0.23
HIF3A-214ENST00000531043 PRO3102Q9H379 93 aa16.5■□□□□ 0.23
HIF3A-214ENST00000531043 FARP2O94887 1054 aaPredicted RBP16.49■□□□□ 0.23
HIF3A-214ENST00000531043 INHAP05111 366 aa16.49■□□□□ 0.23
HIF3A-214ENST00000531043 UBXN2AP68543 259 aa16.49■□□□□ 0.23
HIF3A-214ENST00000531043 TBC1D9Q6ZT07 1266 aa16.49■□□□□ 0.23
HIF3A-214ENST00000531043 ANKRD13CQ8N6S4 541 aa16.49■□□□□ 0.23
HIF3A-214ENST00000531043 ATAD5Q96QE3 1844 aa16.49■□□□□ 0.23
HIF3A-214ENST00000531043 GPR75-ASB3A0A0A6YYF3 556 aa16.48■□□□□ 0.23
HIF3A-214ENST00000531043 SGPL1O95470 568 aa16.48■□□□□ 0.23
HIF3A-214ENST00000531043 API5Q9BZZ5 524 aaKnown RBP16.48■□□□□ 0.23
HIF3A-214ENST00000531043 HMG20BQ9P0W2 317 aa16.48■□□□□ 0.23
HIF3A-214ENST00000531043 TNNQ9UQP3 1299 aa16.48■□□□□ 0.23
HIF3A-214ENST00000531043 SLC45A1Q9Y2W3 748 aa16.48■□□□□ 0.23
HIF3A-214ENST00000531043 PDS5AQ29RF7 1337 aaKnown RBP16.47■□□□□ 0.23
HIF3A-214ENST00000531043 TNPO2O14787 897 aaKnown RBP16.47■□□□□ 0.23
HIF3A-214ENST00000531043 ZBTB7BO15156 539 aaPredicted RBP16.47■□□□□ 0.23
HIF3A-214ENST00000531043 SRGAP3O43295 1099 aa16.47■□□□□ 0.23
HIF3A-214ENST00000531043 ERICH6Q7L0X2 663 aa16.47■□□□□ 0.23
HIF3A-214ENST00000531043 SMCR8Q8TEV9 937 aaPredicted RBP16.47■□□□□ 0.23
HIF3A-214ENST00000531043 DEFB118Q96PH6 123 aa16.47■□□□□ 0.23
HIF3A-214ENST00000531043 TAOK2Q9UL54 1235 aa16.47■□□□□ 0.23
HIF3A-214ENST00000531043 AGTPBP1Q9UPW5 1226 aa16.47■□□□□ 0.23
HIF3A-214ENST00000531043 RARSP54136 660 aaKnown RBP16.46■□□□□ 0.23
HIF3A-214ENST00000531043 SPP2Q13103 211 aa16.46■□□□□ 0.23
HIF3A-214ENST00000531043 IRF5Q13568 498 aa16.46■□□□□ 0.23
HIF3A-214ENST00000531043 SPTY2D1Q68D10 685 aaPredicted RBP16.46■□□□□ 0.23
HIF3A-214ENST00000531043 HTATIP2Q9BUP3 242 aa16.46■□□□□ 0.23
HIF3A-214ENST00000531043 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.46■□□□□ 0.23
HIF3A-214ENST00000531043 SIPA1L1O43166 1804 aa16.46■□□□□ 0.23
HIF3A-214ENST00000531043 LAMA3Q16787 3333 aa16.46■□□□□ 0.23
HIF3A-214ENST00000531043 LOC285556D6RIA3 1793 aa16.46■□□□□ 0.22
HIF3A-214ENST00000531043 MYO5AQ9Y4I1 1855 aaKnown RBP16.46■□□□□ 0.22
HIF3A-214ENST00000531043 TBC1D12O60347 775 aa16.45■□□□□ 0.22
HIF3A-214ENST00000531043 PEX10O60683 326 aa16.45■□□□□ 0.22
HIF3A-214ENST00000531043 SLF2Q8IX21 1173 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms