RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 PTH1RQ03431 593 aa11.76□□□□□ -0.53
CTNND1-228ENST00000531007 ALX1Q15699 326 aa11.76□□□□□ -0.53
CTNND1-228ENST00000531007 DALRD3Q5D0E6 543 aaKnown RBP11.76□□□□□ -0.53
CTNND1-228ENST00000531007 CREB3L3Q68CJ9 461 aa11.76□□□□□ -0.53
CTNND1-228ENST00000531007 NAA16Q6N069 864 aaPredicted RBP11.76□□□□□ -0.53
CTNND1-228ENST00000531007 GIMAP6Q6P9H5 292 aa11.76□□□□□ -0.53
CTNND1-228ENST00000531007 ZNF589Q86UQ0 364 aaPredicted RBP11.76□□□□□ -0.53
CTNND1-228ENST00000531007 HSCBQ8IWL3 235 aa11.76□□□□□ -0.53
CTNND1-228ENST00000531007 RNF166Q96A37 237 aaPredicted RBP11.76□□□□□ -0.53
CTNND1-228ENST00000531007 EPAS1Q99814 870 aa11.76□□□□□ -0.53
CTNND1-228ENST00000531007 NACAP1Q9BZK3 213 aa11.76□□□□□ -0.53
CTNND1-228ENST00000531007 WWC3Q9ULE0 1092 aa11.76□□□□□ -0.53
CTNND1-228ENST00000531007 MAST2Q6P0Q8 1798 aa11.76□□□□□ -0.53
CTNND1-228ENST00000531007 SLX4Q8IY92 1834 aa11.76□□□□□ -0.53
CTNND1-228ENST00000531007 COL1A1P02452 1464 aaPredicted RBP11.76□□□□□ -0.53
CTNND1-228ENST00000531007 WTIPA6NIX2 430 aaPredicted RBP11.75□□□□□ -0.53
CTNND1-228ENST00000531007 M0R2C6 588 aa11.75□□□□□ -0.53
CTNND1-228ENST00000531007 BAG3O95817 575 aa11.75□□□□□ -0.53
CTNND1-228ENST00000531007 KIAA2012Q0VF49 1180 aa11.75□□□□□ -0.53
CTNND1-228ENST00000531007 DZIP1Q86YF9 867 aaKnown RBP11.75□□□□□ -0.53
CTNND1-228ENST00000531007 NSUN4Q96CB9 384 aaKnown RBP11.75□□□□□ -0.53
CTNND1-228ENST00000531007 PUS7LQ9H0K6 701 aaKnown RBP11.75□□□□□ -0.53
CTNND1-228ENST00000531007 IQSEC3Q9UPP2 1182 aaPredicted RBP11.75□□□□□ -0.53
CTNND1-228ENST00000531007 KIAA1551Q9HCM1 1747 aa11.74□□□□□ -0.53
CTNND1-228ENST00000531007 CCDC88AQ3V6T2 1871 aa11.74□□□□□ -0.53
CTNND1-228ENST00000531007 A0A0G2JLW4 131 aa11.74□□□□□ -0.53
CTNND1-228ENST00000531007 MAGEB6P1A0A0J9YX57 407 aa11.74□□□□□ -0.53
CTNND1-228ENST00000531007 PATL2C9JE40 543 aaKnown RBP11.74□□□□□ -0.53
CTNND1-228ENST00000531007 CYP7A1P22680 504 aa11.74□□□□□ -0.53
CTNND1-228ENST00000531007 MMP14P50281 582 aa11.74□□□□□ -0.53
CTNND1-228ENST00000531007 CHAF1AQ13111 956 aaPredicted RBP11.74□□□□□ -0.53
CTNND1-228ENST00000531007 IMMTQ16891 758 aaKnown RBP11.74□□□□□ -0.53
CTNND1-228ENST00000531007 STRIP1Q5VSL9 837 aa11.74□□□□□ -0.53
CTNND1-228ENST00000531007 STRBPQ96SI9 672 aaKnown RBP11.74□□□□□ -0.53
CTNND1-228ENST00000531007 SEC62Q99442 399 aaKnown RBP11.74□□□□□ -0.53
CTNND1-228ENST00000531007 NOL10Q9BSC4 688 aaKnown RBP11.74□□□□□ -0.53
CTNND1-228ENST00000531007 MRIQ9BWK5 157 aa11.74□□□□□ -0.53
CTNND1-228ENST00000531007 ALDH8A1Q9H2A2 487 aaPredicted RBP11.74□□□□□ -0.53
CTNND1-228ENST00000531007 SNX14Q9Y5W7 946 aa11.74□□□□□ -0.53
CTNND1-228ENST00000531007 SLC27A2O14975 620 aa11.73□□□□□ -0.53
CTNND1-228ENST00000531007 C21orf2O43822 256 aa11.73□□□□□ -0.53
CTNND1-228ENST00000531007 PPP4CP60510 307 aa11.73□□□□□ -0.53
CTNND1-228ENST00000531007 MECOMQ03112 1051 aa11.73□□□□□ -0.53
CTNND1-228ENST00000531007 CACNA1SQ13698 1873 aa11.73□□□□□ -0.53
CTNND1-228ENST00000531007 MFSD14BQ5SR56 506 aa11.73□□□□□ -0.53
CTNND1-228ENST00000531007 MYO3BQ8WXR4 1341 aa11.72□□□□□ -0.53
CTNND1-228ENST00000531007 LTBP3Q9NS15 1303 aa11.72□□□□□ -0.53
CTNND1-228ENST00000531007 ZNF213O14771 459 aa11.72□□□□□ -0.53
CTNND1-228ENST00000531007 MBD4O95243 580 aa11.72□□□□□ -0.53
CTNND1-228ENST00000531007 PCP11498 1178 aaKnown RBP11.72□□□□□ -0.53
CTNND1-228ENST00000531007 HDLBPQ00341 1268 aaKnown RBP11.72□□□□□ -0.53
CTNND1-228ENST00000531007 ANKRD1Q15327 319 aa11.72□□□□□ -0.53
CTNND1-228ENST00000531007 VPS53Q5VIR6 699 aa11.72□□□□□ -0.53
CTNND1-228ENST00000531007 TTLL5Q6EMB2 1281 aa11.72□□□□□ -0.53
CTNND1-228ENST00000531007 CCDC129Q6ZRS4 1044 aa11.72□□□□□ -0.53
CTNND1-228ENST00000531007 RIOK1Q9BRS2 568 aaKnown RBP11.72□□□□□ -0.53
CTNND1-228ENST00000531007 CRNKL1Q9BZJ0 848 aaKnown RBP11.72□□□□□ -0.53
CTNND1-228ENST00000531007 ATP8A2Q9NTI2 1148 aa11.72□□□□□ -0.53
CTNND1-228ENST00000531007 CYP46A1Q9Y6A2 500 aa11.72□□□□□ -0.53
CTNND1-228ENST00000531007 WDR19Q8NEZ3 1342 aa11.71□□□□□ -0.53
CTNND1-228ENST00000531007 USP17L3A6NCW0 530 aa11.71□□□□□ -0.53
CTNND1-228ENST00000531007 USP17L4A6NCW7 530 aa11.71□□□□□ -0.53
CTNND1-228ENST00000531007 FGAP02671 866 aa11.71□□□□□ -0.53
CTNND1-228ENST00000531007 CYP21A2P08686 494 aa11.71□□□□□ -0.53
CTNND1-228ENST00000531007 PRDX5P30044 214 aa11.71□□□□□ -0.53
CTNND1-228ENST00000531007 NEK4P51957 841 aa11.71□□□□□ -0.53
CTNND1-228ENST00000531007 GTF2IP78347 998 aa11.71□□□□□ -0.53
CTNND1-228ENST00000531007 BLOC1S2Q6QNY1 142 aa11.71□□□□□ -0.53
CTNND1-228ENST00000531007 RUFY3Q7L099 469 aa11.71□□□□□ -0.53
CTNND1-228ENST00000531007 USP17L1Q7RTZ2 530 aa11.71□□□□□ -0.53
CTNND1-228ENST00000531007 DDX12PQ92771 950 aa11.71□□□□□ -0.53
CTNND1-228ENST00000531007 SLC4A5Q9BY07 1137 aa11.71□□□□□ -0.53
CTNND1-228ENST00000531007 TBC1D2Q9BYX2 928 aa11.71□□□□□ -0.53
CTNND1-228ENST00000531007 NAPBQ9H115 298 aa11.71□□□□□ -0.53
CTNND1-228ENST00000531007 PALD1Q9ULE6 856 aa11.71□□□□□ -0.53
CTNND1-228ENST00000531007 BRCA1P38398 1863 aaKnown RBP11.71□□□□□ -0.53
CTNND1-228ENST00000531007 MROH7-TTC4A0A0A0MT08 1334 aa11.7□□□□□ -0.54
CTNND1-228ENST00000531007 K7ELQ4 463 aaPredicted RBP11.7□□□□□ -0.54
CTNND1-228ENST00000531007 PPIP5K2O43314 1243 aa11.7□□□□□ -0.54
CTNND1-228ENST00000531007 ECE2O60344 883 aa11.7□□□□□ -0.54
CTNND1-228ENST00000531007 APPP05067 770 aa11.7□□□□□ -0.54
CTNND1-228ENST00000531007 HHIPL2Q6UWX4 724 aa11.7□□□□□ -0.54
CTNND1-228ENST00000531007 IFNL3Q8IZI9 196 aa11.7□□□□□ -0.54
CTNND1-228ENST00000531007 CHMP4CQ96CF2 233 aa11.7□□□□□ -0.54
CTNND1-228ENST00000531007 JAKMIP1Q96N16 626 aaKnown RBP11.7□□□□□ -0.54
CTNND1-228ENST00000531007 GPR101Q96P66 508 aaPredicted RBP11.7□□□□□ -0.54
CTNND1-228ENST00000531007 NEK1Q96PY6 1258 aa11.7□□□□□ -0.54
CTNND1-228ENST00000531007 FHDC1Q9C0D6 1143 aaPredicted RBP11.7□□□□□ -0.54
CTNND1-228ENST00000531007 SLC4A4Q9Y6R1 1079 aa11.7□□□□□ -0.54
CTNND1-228ENST00000531007 MYO5AQ9Y4I1 1855 aaKnown RBP11.7□□□□□ -0.54
CTNND1-228ENST00000531007 GAKO14976 1311 aa11.69□□□□□ -0.54
CTNND1-228ENST00000531007 GPR75-ASB3A0A0A6YYF3 556 aa11.69□□□□□ -0.54
CTNND1-228ENST00000531007 GSG1L2A8MUP6 293 aa11.69□□□□□ -0.54
CTNND1-228ENST00000531007 FOXP2O15409 715 aa11.69□□□□□ -0.54
CTNND1-228ENST00000531007 HRO43593 1189 aa11.69□□□□□ -0.54
CTNND1-228ENST00000531007 CHGBP05060 677 aa11.69□□□□□ -0.54
CTNND1-228ENST00000531007 CASTP20810 708 aaKnown RBP11.69□□□□□ -0.54
CTNND1-228ENST00000531007 TRDNQ13061 729 aa11.69□□□□□ -0.54
CTNND1-228ENST00000531007 OLFM4Q6UX06 510 aa11.69□□□□□ -0.54
CTNND1-228ENST00000531007 AMOTL1Q8IY63 956 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms