RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 BIN2Q9UBW5 565 aaPredicted RBP19.56■□□□□ 0.72
CHMP4A-204ENST00000530996 SRRDQ9UH36 339 aa19.56■□□□□ 0.72
CHMP4A-204ENST00000530996 ZHX2Q9Y6X8 837 aa19.56■□□□□ 0.72
CHMP4A-204ENST00000530996 RFX7Q2KHR2 1363 aa19.56■□□□□ 0.72
CHMP4A-204ENST00000530996 ATRNL1Q5VV63 1379 aa19.56■□□□□ 0.72
CHMP4A-204ENST00000530996 DOCK2Q92608 1830 aa19.55■□□□□ 0.72
CHMP4A-204ENST00000530996 PDS5AQ29RF7 1337 aaKnown RBP19.55■□□□□ 0.72
CHMP4A-204ENST00000530996 CYP2C8P10632 490 aa19.55■□□□□ 0.72
CHMP4A-204ENST00000530996 OSBPP22059 807 aa19.55■□□□□ 0.72
CHMP4A-204ENST00000530996 ERICH6Q7L0X2 663 aa19.55■□□□□ 0.72
CHMP4A-204ENST00000530996 FRAT1Q92837 279 aaPredicted RBP19.55■□□□□ 0.72
CHMP4A-204ENST00000530996 ADGRA2Q96PE1 1338 aa19.54■□□□□ 0.72
CHMP4A-204ENST00000530996 CXCL11O14625 94 aa19.54■□□□□ 0.72
CHMP4A-204ENST00000530996 FCGRTP55899 365 aa19.54■□□□□ 0.72
CHMP4A-204ENST00000530996 HABP4Q5JVS0 413 aaKnown RBP19.54■□□□□ 0.72
CHMP4A-204ENST00000530996 DDX4Q9NQI0 724 aaKnown RBP19.54■□□□□ 0.72
CHMP4A-204ENST00000530996 AK9Q5TCS8 1911 aa19.54■□□□□ 0.72
CHMP4A-204ENST00000530996 KIAA0100Q14667 2235 aaKnown RBP19.53■□□□□ 0.72
CHMP4A-204ENST00000530996 TRIM75PA6NK02 468 aa19.53■□□□□ 0.72
CHMP4A-204ENST00000530996 PTPRAP18433 802 aa19.53■□□□□ 0.72
CHMP4A-204ENST00000530996 CTGFP29279 349 aa19.53■□□□□ 0.72
CHMP4A-204ENST00000530996 GRK4P32298 578 aa19.53■□□□□ 0.72
CHMP4A-204ENST00000530996 MECOMQ03112 1051 aa19.53■□□□□ 0.72
CHMP4A-204ENST00000530996 MOGSQ13724 837 aa19.53■□□□□ 0.72
CHMP4A-204ENST00000530996 FASTKD5Q7L8L6 764 aaKnown RBP19.53■□□□□ 0.72
CHMP4A-204ENST00000530996 SMCR8Q8TEV9 937 aaPredicted RBP19.53■□□□□ 0.72
CHMP4A-204ENST00000530996 A0A0G2JLL6 359 aaPredicted RBP19.52■□□□□ 0.72
CHMP4A-204ENST00000530996 DDTLA6NHG4 134 aaPredicted RBP19.52■□□□□ 0.72
CHMP4A-204ENST00000530996 PHF20L1A8MW92 1017 aa19.52■□□□□ 0.72
CHMP4A-204ENST00000530996 IPO8O15397 1037 aaKnown RBP19.52■□□□□ 0.72
CHMP4A-204ENST00000530996 GSTO1P78417 241 aa19.52■□□□□ 0.72
CHMP4A-204ENST00000530996 PRKCZQ05513 592 aa19.52■□□□□ 0.72
CHMP4A-204ENST00000530996 PI16Q6UXB8 463 aa19.52■□□□□ 0.72
CHMP4A-204ENST00000530996 SH3BP5LQ7L8J4 393 aa19.52■□□□□ 0.72
CHMP4A-204ENST00000530996 PRRT2Q7Z6L0 340 aaPredicted RBP19.52■□□□□ 0.72
CHMP4A-204ENST00000530996 ARHGAP45Q92619 1136 aa19.52■□□□□ 0.72
CHMP4A-204ENST00000530996 RAI14Q9P0K7 980 aa19.52■□□□□ 0.72
CHMP4A-204ENST00000530996 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.52■□□□□ 0.72
CHMP4A-204ENST00000530996 GNAI2P04899 355 aa19.51■□□□□ 0.71
CHMP4A-204ENST00000530996 MTX1Q13505 466 aa19.51■□□□□ 0.71
CHMP4A-204ENST00000530996 MTFR1Q15390 333 aa19.51■□□□□ 0.71
CHMP4A-204ENST00000530996 GPAT2Q6NUI2 795 aa19.51■□□□□ 0.71
CHMP4A-204ENST00000530996 CLUAP1Q96AJ1 413 aa19.51■□□□□ 0.71
CHMP4A-204ENST00000530996 FAM196BA6NMK8 535 aa19.5■□□□□ 0.71
CHMP4A-204ENST00000530996 SLURP2P0DP57 97 aa19.5■□□□□ 0.71
CHMP4A-204ENST00000530996 TRIM27P14373 513 aa19.5■□□□□ 0.71
CHMP4A-204ENST00000530996 UBXN2AP68543 259 aa19.5■□□□□ 0.71
CHMP4A-204ENST00000530996 G3BP1Q13283 466 aaKnown RBP eCLIP19.5■□□□□ 0.71
CHMP4A-204ENST00000530996 CCDC84Q86UT8 332 aaPredicted RBP19.5■□□□□ 0.71
CHMP4A-204ENST00000530996 SPATA5Q8NB90 893 aa19.5■□□□□ 0.71
CHMP4A-204ENST00000530996 NOL10Q9BSC4 688 aaKnown RBP19.5■□□□□ 0.71
CHMP4A-204ENST00000530996 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.5■□□□□ 0.71
CHMP4A-204ENST00000530996 HMG20BQ9P0W2 317 aa19.5■□□□□ 0.71
CHMP4A-204ENST00000530996 CCER2I3L3R5 266 aa19.49■□□□□ 0.71
CHMP4A-204ENST00000530996 CTNND1O60716 968 aaKnown RBP19.49■□□□□ 0.71
CHMP4A-204ENST00000530996 LDHCP07864 332 aa19.49■□□□□ 0.71
CHMP4A-204ENST00000530996 BCRP11274 1271 aa19.49■□□□□ 0.71
CHMP4A-204ENST00000530996 OS9Q13438 667 aaPredicted RBP19.49■□□□□ 0.71
CHMP4A-204ENST00000530996 ATF7IPQ6VMQ6 1270 aa19.49■□□□□ 0.71
CHMP4A-204ENST00000530996 NKX2-3Q8TAU0 364 aa19.49■□□□□ 0.71
CHMP4A-204ENST00000530996 FAM163AQ96GL9 167 aaPredicted RBP19.49■□□□□ 0.71
CHMP4A-204ENST00000530996 TAOK2Q9UL54 1235 aa19.49■□□□□ 0.71
CHMP4A-204ENST00000530996 TNNQ9UQP3 1299 aa19.49■□□□□ 0.71
CHMP4A-204ENST00000530996 AFG3L2Q9Y4W6 797 aa19.49■□□□□ 0.71
CHMP4A-204ENST00000530996 MYH2Q9UKX2 1941 aa19.49■□□□□ 0.71
CHMP4A-204ENST00000530996 ZBTB22O15209 634 aa19.48■□□□□ 0.71
CHMP4A-204ENST00000530996 CCL5P13501 91 aa19.48■□□□□ 0.71
CHMP4A-204ENST00000530996 TBC1D9Q6ZT07 1266 aa19.48■□□□□ 0.71
CHMP4A-204ENST00000530996 SLAIN1Q8ND83 568 aa19.48■□□□□ 0.71
CHMP4A-204ENST00000530996 SHISA4Q96DD7 197 aa19.48■□□□□ 0.71
CHMP4A-204ENST00000530996 RNF208Q9H0X6 261 aa19.48■□□□□ 0.71
CHMP4A-204ENST00000530996 LRP2BPQ9P2M1 347 aa19.48■□□□□ 0.71
CHMP4A-204ENST00000530996 DOCK1Q14185 1865 aa19.48■□□□□ 0.71
CHMP4A-204ENST00000530996 GPR75-ASB3A0A0A6YYF3 556 aa19.47■□□□□ 0.71
CHMP4A-204ENST00000530996 TNPO2O14787 897 aaKnown RBP19.47■□□□□ 0.71
CHMP4A-204ENST00000530996 RHBDL3P58872 404 aa19.47■□□□□ 0.71
CHMP4A-204ENST00000530996 TEX11Q8IYF3 940 aa19.47■□□□□ 0.71
CHMP4A-204ENST00000530996 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.47■□□□□ 0.71
CHMP4A-204ENST00000530996 PNMA6EA0A0J9YXQ4 647 aa19.46■□□□□ 0.71
CHMP4A-204ENST00000530996 BCAR3O75815 825 aa19.46■□□□□ 0.71
CHMP4A-204ENST00000530996 UQCRFS1P1P0C7P4 283 aa19.46■□□□□ 0.71
CHMP4A-204ENST00000530996 ARID4AP29374 1257 aaPredicted RBP19.46■□□□□ 0.71
CHMP4A-204ENST00000530996 TTC39AQ5SRH9 613 aa19.46■□□□□ 0.71
CHMP4A-204ENST00000530996 DPF3Q92784 378 aa19.46■□□□□ 0.71
CHMP4A-204ENST00000530996 NSUN4Q96CB9 384 aaKnown RBP19.46■□□□□ 0.71
CHMP4A-204ENST00000530996 PNMA3Q9UL41 463 aa19.46■□□□□ 0.71
CHMP4A-204ENST00000530996 GABRQQ9UN88 632 aa19.46■□□□□ 0.71
CHMP4A-204ENST00000530996 AGTPBP1Q9UPW5 1226 aa19.46■□□□□ 0.71
CHMP4A-204ENST00000530996 SLC45A1Q9Y2W3 748 aa19.46■□□□□ 0.71
CHMP4A-204ENST00000530996 H0YGN5 161 aa19.45■□□□□ 0.7
CHMP4A-204ENST00000530996 MCAMP43121 646 aa19.45■□□□□ 0.7
CHMP4A-204ENST00000530996 ZNF384Q8TF68 577 aa19.45■□□□□ 0.7
CHMP4A-204ENST00000530996 OSBPL5Q9H0X9 879 aaPredicted RBP19.45■□□□□ 0.7
CHMP4A-204ENST00000530996 COL2A1P02458 1487 aaPredicted RBP19.44■□□□□ 0.7
CHMP4A-204ENST00000530996 ADCY3O60266 1144 aa19.44■□□□□ 0.7
CHMP4A-204ENST00000530996 ELNP15502 786 aa19.44■□□□□ 0.7
CHMP4A-204ENST00000530996 TREML2Q5T2D2 321 aa19.44■□□□□ 0.7
CHMP4A-204ENST00000530996 ANKRD13CQ8N6S4 541 aa19.44■□□□□ 0.7
CHMP4A-204ENST00000530996 TRIM34Q9BYJ4 488 aa19.44■□□□□ 0.7
CHMP4A-204ENST00000530996 SNRKQ9NRH2 765 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms