RNA–Protein interactions for RNA: ENST00000530402.1

VPS26B-205, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-205ENST00000530402 TINF2Q9BSI4 451 aa9.41□□□□□ -0.9
VPS26B-205ENST00000530402 CACNA2D2Q9NY47 1150 aa9.41□□□□□ -0.9
VPS26B-205ENST00000530402 CSADQ9Y600 493 aa9.41□□□□□ -0.9
VPS26B-205ENST00000530402 FAM221AA4D161 298 aa9.4□□□□□ -0.9
VPS26B-205ENST00000530402 SART1O43290 800 aaKnown RBP9.4□□□□□ -0.9
VPS26B-205ENST00000530402 CILPO75339 1184 aa9.4□□□□□ -0.9
VPS26B-205ENST00000530402 DNAJA1P31689 397 aaKnown RBP9.4□□□□□ -0.9
VPS26B-205ENST00000530402 MCM4P33991 863 aa9.4□□□□□ -0.9
VPS26B-205ENST00000530402 ID3Q02535 119 aa9.4□□□□□ -0.9
VPS26B-205ENST00000530402 MPP2Q14168 576 aa9.4□□□□□ -0.9
VPS26B-205ENST00000530402 SPATA32Q96LK8 384 aa9.4□□□□□ -0.9
VPS26B-205ENST00000530402 CRKP46108 304 aa9.39□□□□□ -0.91
VPS26B-205ENST00000530402 GJA8P48165 433 aa9.39□□□□□ -0.91
VPS26B-205ENST00000530402 IREB2P48200 963 aaKnown RBP9.39□□□□□ -0.91
VPS26B-205ENST00000530402 CDK8P49336 464 aa9.39□□□□□ -0.91
VPS26B-205ENST00000530402 INPP5AQ14642 412 aa9.39□□□□□ -0.91
VPS26B-205ENST00000530402 ANKRD34AQ69YU3 496 aa9.39□□□□□ -0.91
VPS26B-205ENST00000530402 LRFN4Q6PJG9 635 aa9.39□□□□□ -0.91
VPS26B-205ENST00000530402 C12orf40Q86WS4 652 aa9.39□□□□□ -0.91
VPS26B-205ENST00000530402 SMG8Q8ND04 991 aaKnown RBP9.39□□□□□ -0.91
VPS26B-205ENST00000530402 PLPPR2Q96GM1 343 aa9.39□□□□□ -0.91
VPS26B-205ENST00000530402 CEP41Q9BYV8 373 aa9.39□□□□□ -0.91
VPS26B-205ENST00000530402 SNCAIPQ9Y6H5 919 aa9.39□□□□□ -0.91
VPS26B-205ENST00000530402 PRAMEF27A3QJZ7 478 aa9.38□□□□□ -0.91
VPS26B-205ENST00000530402 ADH5P11766 374 aa9.38□□□□□ -0.91
VPS26B-205ENST00000530402 DRD2P14416 443 aa9.38□□□□□ -0.91
VPS26B-205ENST00000530402 ARID5AQ03989 594 aa9.38□□□□□ -0.91
VPS26B-205ENST00000530402 SOX4Q06945 474 aaPredicted RBP9.38□□□□□ -0.91
VPS26B-205ENST00000530402 DYMQ7RTS9 669 aa9.38□□□□□ -0.91
VPS26B-205ENST00000530402 REC114Q7Z4M0 266 aa9.38□□□□□ -0.91
VPS26B-205ENST00000530402 WFDC12Q8WWY7 111 aa9.38□□□□□ -0.91
VPS26B-205ENST00000530402 SUGCTQ9HAC7 445 aa9.38□□□□□ -0.91
VPS26B-205ENST00000530402 EFR3BQ9Y2G0 817 aa9.38□□□□□ -0.91
VPS26B-205ENST00000530402 ZC3H12AQ5D1E8 599 aaKnown RBP9.37□□□□□ -0.91
VPS26B-205ENST00000530402 SLC43A3Q8NBI5 491 aa9.37□□□□□ -0.91
VPS26B-205ENST00000530402 PPP1R9AQ9ULJ8 1098 aa9.37□□□□□ -0.91
VPS26B-205ENST00000530402 SYNGAP1Q96PV0 1343 aa9.36□□□□□ -0.91
VPS26B-205ENST00000530402 TMPRSS2O15393 492 aa9.36□□□□□ -0.91
VPS26B-205ENST00000530402 GAS2O43903 313 aaKnown RBP9.36□□□□□ -0.91
VPS26B-205ENST00000530402 GRIN3BO60391 1043 aa9.36□□□□□ -0.91
VPS26B-205ENST00000530402 NOS3P29474 1203 aa9.36□□□□□ -0.91
VPS26B-205ENST00000530402 RASGRP4Q8TDF6 673 aa9.36□□□□□ -0.91
VPS26B-205ENST00000530402 LRRC3Q9BY71 257 aa9.36□□□□□ -0.91
VPS26B-205ENST00000530402 TANGO6Q9C0B7 1094 aa9.36□□□□□ -0.91
VPS26B-205ENST00000530402 ATXN3LQ9H3M9 355 aa9.36□□□□□ -0.91
VPS26B-205ENST00000530402 PIDD1Q9HB75 910 aa9.36□□□□□ -0.91
VPS26B-205ENST00000530402 BRMS1Q9HCU9 246 aa9.36□□□□□ -0.91
VPS26B-205ENST00000530402 GINM1Q9NU53 330 aa9.36□□□□□ -0.91
VPS26B-205ENST00000530402 NASPP49321 788 aaPredicted RBP9.35□□□□□ -0.91
VPS26B-205ENST00000530402 ZNF165P49910 485 aa9.35□□□□□ -0.91
VPS26B-205ENST00000530402 USP11P51784 963 aa9.35□□□□□ -0.91
VPS26B-205ENST00000530402 ERVK-24P63145 666 aa9.35□□□□□ -0.91
VPS26B-205ENST00000530402 MBTPS1Q14703 1052 aa9.35□□□□□ -0.91
VPS26B-205ENST00000530402 SF3A1Q15459 793 aaKnown RBP9.35□□□□□ -0.91
VPS26B-205ENST00000530402 PPM1JQ5JR12 505 aa9.35□□□□□ -0.91
VPS26B-205ENST00000530402 GK5Q6ZS86 529 aa9.35□□□□□ -0.91
VPS26B-205ENST00000530402 SLITRK4Q8IW52 837 aa9.35□□□□□ -0.91
VPS26B-205ENST00000530402 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.35□□□□□ -0.91
VPS26B-205ENST00000530402 CRIM1Q9NZV1 1036 aa9.35□□□□□ -0.91
VPS26B-205ENST00000530402 PPP1R1BQ9UD71 204 aaPredicted RBP9.35□□□□□ -0.91
VPS26B-205ENST00000530402 HIF3AQ9Y2N7 669 aa9.35□□□□□ -0.91
VPS26B-205ENST00000530402 PCDHGC5Q9Y5F6 944 aa9.35□□□□□ -0.91
VPS26B-205ENST00000530402 GFRA2O00451 464 aa9.34□□□□□ -0.91
VPS26B-205ENST00000530402 RNGTTO60942 597 aaKnown RBP9.34□□□□□ -0.91
VPS26B-205ENST00000530402 ATF4P18848 351 aaPredicted RBP9.34□□□□□ -0.91
VPS26B-205ENST00000530402 ASPAP45381 313 aa9.34□□□□□ -0.91
VPS26B-205ENST00000530402 ETF1P62495 437 aaKnown RBP9.34□□□□□ -0.91
VPS26B-205ENST00000530402 COL9A2Q14055 689 aaPredicted RBP9.34□□□□□ -0.91
VPS26B-205ENST00000530402 ADGRE1Q14246 886 aa9.34□□□□□ -0.91
VPS26B-205ENST00000530402 FBXW10Q5XX13 1052 aa9.34□□□□□ -0.91
VPS26B-205ENST00000530402 CPLX3Q8WVH0 158 aa9.34□□□□□ -0.91
VPS26B-205ENST00000530402 SREK1Q8WXA9 508 aaKnown RBP9.34□□□□□ -0.91
VPS26B-205ENST00000530402 SEC16BQ96JE7 1060 aa9.34□□□□□ -0.91
VPS26B-205ENST00000530402 DCAF5Q96JK2 942 aa9.34□□□□□ -0.91
VPS26B-205ENST00000530402 FANCD2OSQ96PS1 177 aa9.34□□□□□ -0.91
VPS26B-205ENST00000530402 SSU72Q9NP77 194 aaKnown RBP9.34□□□□□ -0.91
VPS26B-205ENST00000530402 USP35Q9P2H5 1018 aa9.34□□□□□ -0.91
VPS26B-205ENST00000530402 PRKAG2Q9UGJ0 569 aa9.34□□□□□ -0.91
VPS26B-205ENST00000530402 KRBA1A5PL33 1030 aa9.33□□□□□ -0.92
VPS26B-205ENST00000530402 TIAF1O95411 115 aa9.33□□□□□ -0.92
VPS26B-205ENST00000530402 PREPP48147 710 aa9.33□□□□□ -0.92
VPS26B-205ENST00000530402 PDE4BQ07343 736 aa9.33□□□□□ -0.92
VPS26B-205ENST00000530402 CYFIP1Q7L576 1253 aa9.33□□□□□ -0.92
VPS26B-205ENST00000530402 TXNRD3Q86VQ6 643 aa9.33□□□□□ -0.92
VPS26B-205ENST00000530402 FERD3LQ96RJ6 166 aa9.33□□□□□ -0.92
VPS26B-205ENST00000530402 PCDHB14Q9Y5E9 798 aa9.33□□□□□ -0.92
VPS26B-205ENST00000530402 SSBP05455 408 aaKnown RBP eCLIP9.32□□□□□ -0.92
VPS26B-205ENST00000530402 HCLS1P14317 486 aaPredicted RBP9.32□□□□□ -0.92
VPS26B-205ENST00000530402 TTLL4Q14679 1199 aa9.32□□□□□ -0.92
VPS26B-205ENST00000530402 CDC37L1Q7L3B6 337 aa9.32□□□□□ -0.92
VPS26B-205ENST00000530402 C2CD4AQ8NCU7 369 aaPredicted RBP9.32□□□□□ -0.92
VPS26B-205ENST00000530402 DISC1Q9NRI5 854 aa9.32□□□□□ -0.92
VPS26B-205ENST00000530402 ACTL7BQ9Y614 415 aa9.32□□□□□ -0.92
VPS26B-205ENST00000530402 C1QTNF9BB2RNN3 333 aa9.31□□□□□ -0.92
VPS26B-205ENST00000530402 PLCG1P19174 1290 aa9.31□□□□□ -0.92
VPS26B-205ENST00000530402 ATP2B1P20020 1258 aa9.31□□□□□ -0.92
VPS26B-205ENST00000530402 RAB6AP20340 208 aa9.31□□□□□ -0.92
VPS26B-205ENST00000530402 GRK4P32298 578 aa9.31□□□□□ -0.92
VPS26B-205ENST00000530402 CHRNA4P43681 627 aa9.31□□□□□ -0.92
VPS26B-205ENST00000530402 MLECQ14165 292 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms