RNA–Protein interactions for RNA: ENST00000530174.1

PCNX3-203, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 1,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-203ENST00000530174 SH3BP5LQ7L8J4 393 aa23.03■■□□□ 1.28
PCNX3-203ENST00000530174 KIF1BPQ96EK5 621 aa23.03■■□□□ 1.28
PCNX3-203ENST00000530174 MS4A4AQ96JQ5 239 aa23.03■■□□□ 1.28
PCNX3-203ENST00000530174 MCOLN1Q9GZU1 580 aa23.03■■□□□ 1.28
PCNX3-203ENST00000530174 PIH1D3Q9NQM4 214 aaKnown RBP23.03■■□□□ 1.28
PCNX3-203ENST00000530174 ATRNL1Q5VV63 1379 aa23.02■■□□□ 1.28
PCNX3-203ENST00000530174 TESPA1A2RU30 521 aaPredicted RBP23.02■■□□□ 1.28
PCNX3-203ENST00000530174 NAA16Q6N069 864 aaPredicted RBP23.02■■□□□ 1.28
PCNX3-203ENST00000530174 ZSCAN29Q8IWY8 852 aaPredicted RBP23.02■■□□□ 1.28
PCNX3-203ENST00000530174 ZNF296Q8WUU4 475 aaPredicted RBP23.02■■□□□ 1.28
PCNX3-203ENST00000530174 YTHDC1Q96MU7 727 aaKnown RBP23.02■■□□□ 1.28
PCNX3-203ENST00000530174 R3HDMLQ9H3Y0 253 aa23.02■■□□□ 1.28
PCNX3-203ENST00000530174 ZNF112Q9UJU3 913 aa23.02■■□□□ 1.28
PCNX3-203ENST00000530174 MYO5AQ9Y4I1 1855 aaKnown RBP23.02■■□□□ 1.28
PCNX3-203ENST00000530174 DDTLA6NHG4 134 aaPredicted RBP23.01■■□□□ 1.27
PCNX3-203ENST00000530174 GPR25O00155 361 aa23.01■■□□□ 1.27
PCNX3-203ENST00000530174 ERO1BQ86YB8 467 aa23.01■■□□□ 1.27
PCNX3-203ENST00000530174 PTPN18Q99952 460 aa23.01■■□□□ 1.27
PCNX3-203ENST00000530174 RAB11FIP3O75154 756 aa23■■□□□ 1.27
PCNX3-203ENST00000530174 MAP4K4O95819 1239 aaPredicted RBP23■■□□□ 1.27
PCNX3-203ENST00000530174 GTF2A2P52657 109 aa23■■□□□ 1.27
PCNX3-203ENST00000530174 NOM1Q5C9Z4 860 aaKnown RBP23■■□□□ 1.27
PCNX3-203ENST00000530174 CLASRPQ8N2M8 674 aaKnown RBP23■■□□□ 1.27
PCNX3-203ENST00000530174 BRI3BPQ8WY22 251 aa23■■□□□ 1.27
PCNX3-203ENST00000530174 NDUFB9Q9Y6M9 179 aa23■■□□□ 1.27
PCNX3-203ENST00000530174 NPM3O75607 178 aaKnown RBP22.99■■□□□ 1.27
PCNX3-203ENST00000530174 OTUD7BQ6GQQ9 843 aa22.99■■□□□ 1.27
PCNX3-203ENST00000530174 ADGRA1Q86SQ6 560 aa22.99■■□□□ 1.27
PCNX3-203ENST00000530174 NOL10Q9BSC4 688 aaKnown RBP22.99■■□□□ 1.27
PCNX3-203ENST00000530174 CCL15-CCL14A0A0B4J2E2 113 aa22.98■■□□□ 1.27
PCNX3-203ENST00000530174 PPIL2Q13356 520 aa22.98■■□□□ 1.27
PCNX3-203ENST00000530174 CCL15Q16663 113 aa22.98■■□□□ 1.27
PCNX3-203ENST00000530174 NOL9Q5SY16 702 aaKnown RBP22.98■■□□□ 1.27
PCNX3-203ENST00000530174 TEX11Q8IYF3 940 aa22.98■■□□□ 1.27
PCNX3-203ENST00000530174 SH3RF3Q8TEJ3 882 aaPredicted RBP22.98■■□□□ 1.27
PCNX3-203ENST00000530174 BCL11AQ9H165 835 aa22.98■■□□□ 1.27
PCNX3-203ENST00000530174 AATFQ9NY61 560 aaKnown RBP eCLIP22.98■■□□□ 1.27
PCNX3-203ENST00000530174 IRF6O14896 467 aa22.97■■□□□ 1.27
PCNX3-203ENST00000530174 IGSF3O75054 1194 aa22.97■■□□□ 1.27
PCNX3-203ENST00000530174 IDH1O75874 414 aaKnown RBP22.97■■□□□ 1.27
PCNX3-203ENST00000530174 BAG3O95817 575 aa22.97■■□□□ 1.27
PCNX3-203ENST00000530174 SLURP2P0DP57 97 aa22.97■■□□□ 1.27
PCNX3-203ENST00000530174 CTU1Q7Z7A3 348 aaKnown RBP22.97■■□□□ 1.27
PCNX3-203ENST00000530174 ANTXR1Q9H6X2 564 aa22.97■■□□□ 1.27
PCNX3-203ENST00000530174 PHF20L1A8MW92 1017 aa22.96■■□□□ 1.27
PCNX3-203ENST00000530174 IFIT2P09913 472 aaKnown RBP22.96■■□□□ 1.27
PCNX3-203ENST00000530174 MAP3K10Q02779 954 aa22.96■■□□□ 1.27
PCNX3-203ENST00000530174 PPATQ06203 517 aa22.96■■□□□ 1.27
PCNX3-203ENST00000530174 CRHR2Q13324 411 aa22.96■■□□□ 1.27
PCNX3-203ENST00000530174 OSBPL5Q9H0X9 879 aaPredicted RBP22.96■■□□□ 1.27
PCNX3-203ENST00000530174 COL2A1P02458 1487 aaPredicted RBP22.96■■□□□ 1.27
PCNX3-203ENST00000530174 FKTNO75072 461 aa22.95■■□□□ 1.26
PCNX3-203ENST00000530174 PLCG2P16885 1265 aa22.95■■□□□ 1.26
PCNX3-203ENST00000530174 PPP4CP60510 307 aa22.95■■□□□ 1.26
PCNX3-203ENST00000530174 SNAPC2Q13487 334 aa22.95■■□□□ 1.26
PCNX3-203ENST00000530174 CETPP11597 493 aa22.94■■□□□ 1.26
PCNX3-203ENST00000530174 CYP7A1P22680 504 aa22.94■■□□□ 1.26
PCNX3-203ENST00000530174 RRP1P56182 461 aaKnown RBP22.94■■□□□ 1.26
PCNX3-203ENST00000530174 FAM43AQ8N2R8 423 aa22.94■■□□□ 1.26
PCNX3-203ENST00000530174 SCYL3Q8IZE3 742 aa22.93■■□□□ 1.26
PCNX3-203ENST00000530174 MAGEB6Q8N7X4 407 aa22.93■■□□□ 1.26
PCNX3-203ENST00000530174 CDK5RAP2Q96SN8 1893 aa22.93■■□□□ 1.26
PCNX3-203ENST00000530174 TBC1D12O60347 775 aa22.92■■□□□ 1.26
PCNX3-203ENST00000530174 DYNLL1P63167 89 aaKnown RBP22.92■■□□□ 1.26
PCNX3-203ENST00000530174 MAP3K12Q12852 859 aa22.92■■□□□ 1.26
PCNX3-203ENST00000530174 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.92■■□□□ 1.26
PCNX3-203ENST00000530174 TGFBRAP1Q8WUH2 860 aa22.92■■□□□ 1.26
PCNX3-203ENST00000530174 KCNH4Q9UQ05 1017 aa22.92■■□□□ 1.26
PCNX3-203ENST00000530174 CCDC85CA6NKD9 419 aa22.91■■□□□ 1.26
PCNX3-203ENST00000530174 FAM196BA6NMK8 535 aa22.91■■□□□ 1.26
PCNX3-203ENST00000530174 TAF1CQ15572 869 aaPredicted RBP22.91■■□□□ 1.26
PCNX3-203ENST00000530174 MAPKAPK5Q8IW41 473 aa22.91■■□□□ 1.26
PCNX3-203ENST00000530174 LRRCC1Q9C099 1032 aa22.91■■□□□ 1.26
PCNX3-203ENST00000530174 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.91■■□□□ 1.26
PCNX3-203ENST00000530174 PICK1Q9NRD5 415 aa22.91■■□□□ 1.26
PCNX3-203ENST00000530174 DOCK1Q14185 1865 aa22.91■■□□□ 1.26
PCNX3-203ENST00000530174 FOCADQ5VW36 1801 aa22.91■■□□□ 1.26
PCNX3-203ENST00000530174 FLT1P17948 1338 aa22.9■■□□□ 1.26
PCNX3-203ENST00000530174 BTBD19C9JJ37 291 aa22.9■■□□□ 1.26
PCNX3-203ENST00000530174 CTNND1O60716 968 aaKnown RBP22.9■■□□□ 1.26
PCNX3-203ENST00000530174 TTF1Q15361 905 aaPredicted RBP22.9■■□□□ 1.26
PCNX3-203ENST00000530174 MIGA1Q8NAN2 632 aa22.9■■□□□ 1.26
PCNX3-203ENST00000530174 DNAJC2Q99543 621 aaKnown RBP22.9■■□□□ 1.26
PCNX3-203ENST00000530174 SMARCA5O60264 1052 aaPredicted RBP22.89■■□□□ 1.25
PCNX3-203ENST00000530174 PTPRAP18433 802 aa22.89■■□□□ 1.25
PCNX3-203ENST00000530174 ZFYVE28Q9HCC9 887 aa22.89■■□□□ 1.25
PCNX3-203ENST00000530174 SIPA1L1O43166 1804 aa22.88■■□□□ 1.25
PCNX3-203ENST00000530174 GOLIM4O00461 696 aa22.88■■□□□ 1.25
PCNX3-203ENST00000530174 PKN2Q16513 984 aaKnown RBP22.88■■□□□ 1.25
PCNX3-203ENST00000530174 TMED8Q6PL24 325 aaPredicted RBP22.88■■□□□ 1.25
PCNX3-203ENST00000530174 DHX36Q9H2U1 1008 aaKnown RBP22.88■■□□□ 1.25
PCNX3-203ENST00000530174 ZCCHC17Q9NP64 241 aaKnown RBP22.88■■□□□ 1.25
PCNX3-203ENST00000530174 ZHX2Q9Y6X8 837 aa22.88■■□□□ 1.25
PCNX3-203ENST00000530174 ATP5JP18859 108 aa22.87■■□□□ 1.25
PCNX3-203ENST00000530174 MOGSQ13724 837 aa22.87■■□□□ 1.25
PCNX3-203ENST00000530174 CERS3Q8IU89 383 aa22.87■■□□□ 1.25
PCNX3-203ENST00000530174 EDC3Q96F86 508 aaKnown RBP22.87■■□□□ 1.25
PCNX3-203ENST00000530174 BOLA2Q9H3K6 86 aa22.87■■□□□ 1.25
PCNX3-203ENST00000530174 DCTPP1Q9H773 170 aa22.87■■□□□ 1.25
PCNX3-203ENST00000530174 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms