RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 HOXA10P31260 410 aaPredicted RBP8.37□□□□□ -1.07
USP47-209ENST00000530041 TTLL4Q14679 1199 aa8.37□□□□□ -1.07
USP47-209ENST00000530041 LLGL2Q6P1M3 1020 aa8.37□□□□□ -1.07
USP47-209ENST00000530041 MPRIPQ6WCQ1 1025 aa8.37□□□□□ -1.07
USP47-209ENST00000530041 DTX1Q86Y01 620 aa8.37□□□□□ -1.07
USP47-209ENST00000530041 SMYD4Q8IYR2 804 aaPredicted RBP8.37□□□□□ -1.07
USP47-209ENST00000530041 CYP8B1Q9UNU6 501 aa8.37□□□□□ -1.07
USP47-209ENST00000530041 TTF2Q9UNY4 1162 aaKnown RBP8.37□□□□□ -1.07
USP47-209ENST00000530041 FAM170BA6NMN3 283 aa8.36□□□□□ -1.07
USP47-209ENST00000530041 FOSL1P15407 271 aa8.36□□□□□ -1.07
USP47-209ENST00000530041 ERVK-24P63145 666 aa8.36□□□□□ -1.07
USP47-209ENST00000530041 CYP27A1Q02318 531 aa8.36□□□□□ -1.07
USP47-209ENST00000530041 RASIP1Q5U651 963 aa8.36□□□□□ -1.07
USP47-209ENST00000530041 PCNX4Q63HM2 1172 aa8.36□□□□□ -1.07
USP47-209ENST00000530041 LGR6Q9HBX8 967 aa8.36□□□□□ -1.07
USP47-209ENST00000530041 RNGTTO60942 597 aaKnown RBP8.35□□□□□ -1.07
USP47-209ENST00000530041 ERCC3P19447 782 aa8.35□□□□□ -1.07
USP47-209ENST00000530041 CCDC27Q2M243 656 aa8.35□□□□□ -1.07
USP47-209ENST00000530041 DUSP27Q5VZP5 1158 aa8.35□□□□□ -1.07
USP47-209ENST00000530041 RNF214Q8ND24 703 aa8.35□□□□□ -1.07
USP47-209ENST00000530041 PARP2Q9UGN5 583 aa8.35□□□□□ -1.07
USP47-209ENST00000530041 NEFMP07197 916 aa8.34□□□□□ -1.07
USP47-209ENST00000530041 HCLS1P14317 486 aaPredicted RBP8.34□□□□□ -1.07
USP47-209ENST00000530041 DAB2P98082 770 aa8.34□□□□□ -1.07
USP47-209ENST00000530041 OGFOD3Q6PK18 319 aa8.34□□□□□ -1.07
USP47-209ENST00000530041 FBXO33Q7Z6M2 555 aa8.34□□□□□ -1.07
USP47-209ENST00000530041 PCOLCE2Q9UKZ9 415 aa8.34□□□□□ -1.07
USP47-209ENST00000530041 CYP26A1O43174 497 aa8.33□□□□□ -1.08
USP47-209ENST00000530041 ZNF765Q7L2R6 523 aa8.33□□□□□ -1.08
USP47-209ENST00000530041 PSMD2Q13200 908 aa8.32□□□□□ -1.08
USP47-209ENST00000530041 CCDC85BQ15834 202 aaPredicted RBP8.32□□□□□ -1.08
USP47-209ENST00000530041 MSMPQ1L6U9 139 aa8.32□□□□□ -1.08
USP47-209ENST00000530041 TTBK2Q6IQ55 1244 aa8.32□□□□□ -1.08
USP47-209ENST00000530041 TMC4Q7Z404 712 aa8.32□□□□□ -1.08
USP47-209ENST00000530041 ISL2Q96A47 359 aa8.32□□□□□ -1.08
USP47-209ENST00000530041 PCDHA4Q9UN74 947 aa8.32□□□□□ -1.08
USP47-209ENST00000530041 XPCQ01831 940 aaPredicted RBP8.31□□□□□ -1.08
USP47-209ENST00000530041 RING1Q06587 406 aa8.31□□□□□ -1.08
USP47-209ENST00000530041 CDK5R2Q13319 367 aa8.31□□□□□ -1.08
USP47-209ENST00000530041 CYP27C1Q4G0S4 372 aa8.31□□□□□ -1.08
USP47-209ENST00000530041 SSU72Q9NP77 194 aaKnown RBP8.31□□□□□ -1.08
USP47-209ENST00000530041 DCDC2CA8MYV0 355 aa8.3□□□□□ -1.08
USP47-209ENST00000530041 ADAMTS4O75173 837 aa8.3□□□□□ -1.08
USP47-209ENST00000530041 WNT11O96014 354 aa8.3□□□□□ -1.08
USP47-209ENST00000530041 RPS26P62854 115 aaKnown RBP8.3□□□□□ -1.08
USP47-209ENST00000530041 PPM1JQ5JR12 505 aa8.3□□□□□ -1.08
USP47-209ENST00000530041 C12orf40Q86WS4 652 aa8.3□□□□□ -1.08
USP47-209ENST00000530041 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.3□□□□□ -1.08
USP47-209ENST00000530041 CSADQ9Y600 493 aa8.3□□□□□ -1.08
USP47-209ENST00000530041 FANCGO15287 622 aa8.29□□□□□ -1.08
USP47-209ENST00000530041 FAM87AP0C7U9 286 aa8.29□□□□□ -1.08
USP47-209ENST00000530041 NTF4P34130 210 aa8.29□□□□□ -1.08
USP47-209ENST00000530041 GP2P55259 537 aaKnown RBP8.29□□□□□ -1.08
USP47-209ENST00000530041 MEI1Q5TIA1 1274 aa8.29□□□□□ -1.08
USP47-209ENST00000530041 PSMG3-AS1Q96PY0 264 aa8.29□□□□□ -1.08
USP47-209ENST00000530041 LRRC4CQ9HCJ2 640 aa8.29□□□□□ -1.08
USP47-209ENST00000530041 PICK1Q9NRD5 415 aa8.29□□□□□ -1.08
USP47-209ENST00000530041 PRNPP04156 253 aa8.28□□□□□ -1.08
USP47-209ENST00000530041 ST13P50502 369 aaKnown RBP8.28□□□□□ -1.08
USP47-209ENST00000530041 PTPN11Q06124 597 aaPredicted RBP8.28□□□□□ -1.08
USP47-209ENST00000530041 ZBTB37Q5TC79 503 aa8.28□□□□□ -1.08
USP47-209ENST00000530041 GAL3ST3Q96A11 431 aa8.28□□□□□ -1.08
USP47-209ENST00000530041 ELMO3Q96BJ8 720 aa8.28□□□□□ -1.08
USP47-209ENST00000530041 FAM161BQ96MY7 647 aa8.28□□□□□ -1.08
USP47-209ENST00000530041 ZC3H7BQ9UGR2 993 aaKnown RBP8.28□□□□□ -1.08
USP47-209ENST00000530041 CTSHP09668 335 aa8.27□□□□□ -1.09
USP47-209ENST00000530041 TAGLNQ01995 201 aaKnown RBP8.27□□□□□ -1.09
USP47-209ENST00000530041 INPP5AQ14642 412 aa8.27□□□□□ -1.09
USP47-209ENST00000530041 TAF1CQ15572 869 aaPredicted RBP8.27□□□□□ -1.09
USP47-209ENST00000530041 LRFN4Q6PJG9 635 aa8.27□□□□□ -1.09
USP47-209ENST00000530041 AGMOQ6ZNB7 445 aa8.27□□□□□ -1.09
USP47-209ENST00000530041 DUSP23Q9BVJ7 150 aa8.27□□□□□ -1.09
USP47-209ENST00000530041 BSDC1Q9NW68 430 aaPredicted RBP8.27□□□□□ -1.09
USP47-209ENST00000530041 CCDC39Q9UFE4 941 aa8.27□□□□□ -1.09
USP47-209ENST00000530041 USP31Q70CQ4 1352 aa8.26□□□□□ -1.09
USP47-209ENST00000530041 SORBS3O60504 671 aa8.26□□□□□ -1.09
USP47-209ENST00000530041 LMNB1P20700 586 aa8.26□□□□□ -1.09
USP47-209ENST00000530041 LIG3P49916 1009 aa8.26□□□□□ -1.09
USP47-209ENST00000530041 CYFIP1Q7L576 1253 aa8.26□□□□□ -1.09
USP47-209ENST00000530041 HDXQ7Z353 690 aa8.26□□□□□ -1.09
USP47-209ENST00000530041 NOC4LQ9BVI4 516 aaKnown RBP8.26□□□□□ -1.09
USP47-209ENST00000530041 ANGEL1Q9UNK9 670 aaKnown RBP8.26□□□□□ -1.09
USP47-209ENST00000530041 OAS3Q9Y6K5 1087 aaKnown RBP8.26□□□□□ -1.09
USP47-209ENST00000530041 LEFTY1O75610 366 aa8.25□□□□□ -1.09
USP47-209ENST00000530041 RLBP1P12271 317 aa8.25□□□□□ -1.09
USP47-209ENST00000530041 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.25□□□□□ -1.09
USP47-209ENST00000530041 CDC37L1Q7L3B6 337 aa8.25□□□□□ -1.09
USP47-209ENST00000530041 VSIG10LQ86VR7 867 aa8.25□□□□□ -1.09
USP47-209ENST00000530041 KCT2Q8NC54 265 aa8.25□□□□□ -1.09
USP47-209ENST00000530041 PLPPR2Q96GM1 343 aa8.25□□□□□ -1.09
USP47-209ENST00000530041 CRELD1Q96HD1 420 aa8.25□□□□□ -1.09
USP47-209ENST00000530041 PCDHB5Q9Y5E4 795 aa8.25□□□□□ -1.09
USP47-209ENST00000530041 SNCAIPQ9Y6H5 919 aa8.25□□□□□ -1.09
USP47-209ENST00000530041 ITGAEP38570 1179 aa8.24□□□□□ -1.09
USP47-209ENST00000530041 MAP3K11Q16584 847 aa8.24□□□□□ -1.09
USP47-209ENST00000530041 TOP6BLQ8N6T0 577 aa8.24□□□□□ -1.09
USP47-209ENST00000530041 ZNF507Q8TCN5 953 aa8.24□□□□□ -1.09
USP47-209ENST00000530041 MRS2Q9HD23 443 aa8.24□□□□□ -1.09
USP47-209ENST00000530041 PRAMEF27A3QJZ7 478 aa8.23□□□□□ -1.09
USP47-209ENST00000530041 SEPT6Q14141 434 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms