RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 KARSQ15046 597 aaKnown RBP9.53□□□□□ -0.88
CTNND1-221ENST00000529873 LETM2Q2VYF4 491 aa9.53□□□□□ -0.88
CTNND1-221ENST00000529873 RILPL1Q5EBL4 403 aa9.53□□□□□ -0.88
CTNND1-221ENST00000529873 HAUS3Q68CZ6 603 aa9.53□□□□□ -0.88
CTNND1-221ENST00000529873 MSL1Q68DK7 614 aa9.53□□□□□ -0.88
CTNND1-221ENST00000529873 CCNL1Q9UK58 526 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-221ENST00000529873 ZKSCAN5Q9Y2L8 839 aa9.53□□□□□ -0.88
CTNND1-221ENST00000529873 PPP1R7Q15435 360 aa9.53□□□□□ -0.88
CTNND1-221ENST00000529873 HS1BP3Q53T59 392 aa9.53□□□□□ -0.88
CTNND1-221ENST00000529873 EXOC7Q9UPT5 735 aa9.53□□□□□ -0.88
CTNND1-221ENST00000529873 KRT5P13647 590 aa9.52□□□□□ -0.88
CTNND1-221ENST00000529873 TERF1P54274 439 aa9.52□□□□□ -0.88
CTNND1-221ENST00000529873 MYL5Q02045 173 aa9.52□□□□□ -0.88
CTNND1-221ENST00000529873 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.52□□□□□ -0.88
CTNND1-221ENST00000529873 NOC4LQ9BVI4 516 aaKnown RBP9.52□□□□□ -0.88
CTNND1-221ENST00000529873 SNX14Q9Y5W7 946 aa9.52□□□□□ -0.88
CTNND1-221ENST00000529873 RAPGEF1Q13905 1077 aa9.52□□□□□ -0.89
CTNND1-221ENST00000529873 CCDC14Q49A88 953 aa9.52□□□□□ -0.89
CTNND1-221ENST00000529873 PIK3AP1Q6ZUJ8 805 aa9.52□□□□□ -0.89
CTNND1-221ENST00000529873 CCDC114Q96M63 670 aa9.52□□□□□ -0.89
CTNND1-221ENST00000529873 ANAPC4Q9UJX5 808 aa9.52□□□□□ -0.89
CTNND1-221ENST00000529873 LUC7L2Q9Y383 392 aaKnown RBP9.52□□□□□ -0.89
CTNND1-221ENST00000529873 TBX22Q9Y458 520 aa9.52□□□□□ -0.89
CTNND1-221ENST00000529873 ZFYVE16Q7Z3T8 1539 aa9.52□□□□□ -0.89
CTNND1-221ENST00000529873 BACH1O14867 736 aa9.52□□□□□ -0.89
CTNND1-221ENST00000529873 MTRF1LQ9UGC7 380 aaKnown RBP9.52□□□□□ -0.89
CTNND1-221ENST00000529873 MTUS1Q9ULD2 1270 aa9.52□□□□□ -0.89
CTNND1-221ENST00000529873 SMTNP53814 917 aa9.52□□□□□ -0.89
CTNND1-221ENST00000529873 AKNAD1Q5T1N1 836 aa9.52□□□□□ -0.89
CTNND1-221ENST00000529873 CEP128Q6ZU80 1094 aa9.52□□□□□ -0.89
CTNND1-221ENST00000529873 G2E3Q7L622 706 aa9.52□□□□□ -0.89
CTNND1-221ENST00000529873 JAKMIP2Q96AA8 810 aa9.52□□□□□ -0.89
CTNND1-221ENST00000529873 PDE4DQ08499 809 aa9.52□□□□□ -0.89
CTNND1-221ENST00000529873 ASIC2Q16515 512 aa9.52□□□□□ -0.89
CTNND1-221ENST00000529873 SUPT20HQ8NEM7 779 aa9.52□□□□□ -0.89
CTNND1-221ENST00000529873 RAB3IL1Q8TBN0 382 aa9.52□□□□□ -0.89
CTNND1-221ENST00000529873 APPBP2Q92624 585 aa9.52□□□□□ -0.89
CTNND1-221ENST00000529873 LZTFL1Q9NQ48 299 aa9.52□□□□□ -0.89
CTNND1-221ENST00000529873 STK32BQ9NY57 414 aa9.52□□□□□ -0.89
CTNND1-221ENST00000529873 ATP6V0A2Q9Y487 856 aa9.52□□□□□ -0.89
CTNND1-221ENST00000529873 XRCC6P12956 609 aaKnown RBP eCLIP9.51□□□□□ -0.892e-8■□□□□ 8.5
CTNND1-221ENST00000529873 KCNA6P17658 529 aa9.51□□□□□ -0.89
CTNND1-221ENST00000529873 CFAP58Q5T655 872 aa9.51□□□□□ -0.89
CTNND1-221ENST00000529873 ANO1Q5XXA6 986 aa9.51□□□□□ -0.89
CTNND1-221ENST00000529873 CYP26C1Q6V0L0 522 aa9.51□□□□□ -0.89
CTNND1-221ENST00000529873 BAG1Q99933 345 aaPredicted RBP9.51□□□□□ -0.89
CTNND1-221ENST00000529873 LZTS2Q9BRK4 669 aa9.51□□□□□ -0.89
CTNND1-221ENST00000529873 CCDC87Q9NVE4 849 aa9.51□□□□□ -0.89
CTNND1-221ENST00000529873 BLMP54132 1417 aaPredicted RBP9.51□□□□□ -0.89
CTNND1-221ENST00000529873 USP19O94966 1318 aa9.51□□□□□ -0.89
CTNND1-221ENST00000529873 CUTAO60888 179 aa9.51□□□□□ -0.89
CTNND1-221ENST00000529873 VAV2P52735 878 aa9.51□□□□□ -0.89
CTNND1-221ENST00000529873 SYNRGQ9UMZ2 1314 aa9.51□□□□□ -0.89
CTNND1-221ENST00000529873 FAM89AQ96GI7 184 aa9.51□□□□□ -0.89
CTNND1-221ENST00000529873 FNBP1Q96RU3 617 aa9.51□□□□□ -0.89
CTNND1-221ENST00000529873 A0A1B0GVL5 298 aa9.51□□□□□ -0.89
CTNND1-221ENST00000529873 ATP2C2O75185 946 aa9.51□□□□□ -0.89
CTNND1-221ENST00000529873 CLCN1P35523 988 aa9.51□□□□□ -0.89
CTNND1-221ENST00000529873 ADCY7P51828 1080 aa9.51□□□□□ -0.89
CTNND1-221ENST00000529873 STRN3Q13033 797 aa9.51□□□□□ -0.89
CTNND1-221ENST00000529873 KIAA1524Q8TCG1 905 aa9.51□□□□□ -0.89
CTNND1-221ENST00000529873 CLSTN2Q9H4D0 955 aa9.51□□□□□ -0.89
CTNND1-221ENST00000529873 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.51□□□□□ -0.89
CTNND1-221ENST00000529873 DKC1O60832 514 aaKnown RBP eCLIP9.5□□□□□ -0.89
CTNND1-221ENST00000529873 GAS8O95995 478 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 MIPOL1Q8TD10 442 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 LPIN2Q92539 896 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 PKD2L1Q9P0L9 805 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 CTDSPL2Q05D32 466 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 SYT10Q6XYQ8 523 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 NBPF11Q86T75 865 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 SPATA5Q8NB90 893 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 HOOK2Q96ED9 719 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 SUCLG2Q96I99 432 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 IFT74Q96LB3 600 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 CCDC94Q9BW85 323 aaPredicted RBP9.5□□□□□ -0.89
CTNND1-221ENST00000529873 SH3TC1Q8TE82 1336 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 MYO5CQ9NQX4 1742 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 CHMP2AO43633 222 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 PLCB3Q01970 1234 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 CDAN1Q8IWY9 1227 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 CCDC26Q8TAB7 109 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 SMC6Q96SB8 1091 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 GJA3Q9Y6H8 435 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 TNFAIP3P21580 790 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 ATP5DP30049 168 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 ARL1P40616 181 aaPredicted RBP9.5□□□□□ -0.89
CTNND1-221ENST00000529873 TUBB2AQ13885 445 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 IFT81Q8WYA0 676 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 TUBB2BQ9BVA1 445 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 FEZ2Q9UHY8 353 aaPredicted RBP9.5□□□□□ -0.89
CTNND1-221ENST00000529873 NDC80O14777 642 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 GPAA1O43292 621 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 NLRP12P59046 1061 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 GCKRQ14397 625 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 TTC38Q5R3I4 469 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 LIN9Q5TKA1 542 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 CCDC121Q6ZUS5 278 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 KRT25Q7Z3Z0 450 aa9.5□□□□□ -0.89
CTNND1-221ENST00000529873 ANGEL1Q9UNK9 670 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms